Array 1 36201-37631 **** Predicted by CRISPRDetect 2.4 *** >NZ_MBSA01000023.1 Cronobacter sakazakii strain cro1212W contig23, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 36201 29 100.0 32 ............................. CATACGAACGCCGGCGTCACCGTTGGCGAATC 36262 29 100.0 32 ............................. AGTGCGCCCACGTCGCGTTTTACATTTGCGAC 36323 29 100.0 32 ............................. CGTTCAGAGGCGGTAACAGTGGTGGTCAGCAA 36384 29 100.0 32 ............................. CACAACAACGTCAATGGTGGAGTAGAGCATTC 36445 29 100.0 32 ............................. TGCCGATACCGGCAATTTTTCGGGCGGCGGTA 36506 29 100.0 32 ............................. TCTCAGGGCATTGAATGGGTTGCCAAAATCAA 36567 29 100.0 32 ............................. TACTCCTTCTAGTGCCGATGCCGGCAATTTTG 36628 29 100.0 32 ............................. TTCGTTGGCGCGGCTGTCGAAAAATGCAGGTA 36689 29 100.0 32 ............................. AACGCGCAGGACCTGGTAATTATCGCGGCTCG 36750 29 100.0 32 ............................. CCAGCGCGCCGAAACAGAAGGGCCAGCGCTAC 36811 29 100.0 32 ............................. ACGCCACAGAGTCTATTATCAACGCACTGGCC 36872 29 100.0 32 ............................. CGCATTCCCGGCTGCCTTTACGCTGGCTGCGC 36933 29 100.0 32 ............................. CACCTGCGACCGCCGATTTTGATGAGGCGATC 36994 29 100.0 32 ............................. CGACACAGCGATAACAGAGCCGACAACAACGG 37055 29 100.0 32 ............................. AAAATATAGGTACGCTTATTAGATACCAGCGT 37116 29 100.0 32 ............................. CTCTGGCCCATCATGACGGACTCATCCTGCGT 37177 29 100.0 32 ............................. GTGGCCCAGCGCCGGAAGGCTTCGAAAGACTT 37238 29 100.0 32 ............................. CATCCACTTCGCGCCGCGGCGGTATTTTTTGC 37299 29 100.0 32 ............................. ACCGCTATCCAGTGGGGGATTTACAGCCCTAA 37360 29 96.6 32 .C........................... GCTTATATCCTCTCCTGCCTGATTGCCTCCGG 37421 29 96.6 32 .C........................... CATACGGGTCATAGTCTGTGATTGTGCGGCCC 37482 29 96.6 32 .C........................... GGCGGTTTGGATTTGGAAATTTGATACAACTG 37543 29 96.6 32 .C........................... AGCTCATGAAGCGCAACAGCTTCGGCTCTCTG 37604 28 75.9 0 GC.......-...C...C.TA........ | ========== ====== ====== ====== ============================= ================================ ================== 24 29 98.4 32 CTGTTCCCCGCGCGAGCGGGGATAAACCG # Left flank : ATGAAAGCTTTAAATGGATGATGGCGAACAACATCGCGTTTATTGTCGCCAATATCAATATCAACTACCGTCGGCCTGCCGTGCTTGGCGATCTGCTGACTGTCACGAGCCAGGTGAAGCAGCTTAACGGTAAAAGCGGGGTCTTAAGCCAGGTCATTACGCTTGAGCCGGAAGGCGAAGTGGTCGCCGATGCGCTGATCACCTTTGTCTGTATCGATCTGAAAACGCAGAAAGCCTTACCGATTGAGGGCGATCTGCGTGAAAAACTGGAAAAAATCACAGGGTAAATTCTGCAAAAGTGGCGCTTGTGCTGGCAATCATGGATTTATCACCGCACAGGGTGAACAATCCGGTAGATGTTAACAGCCCACAAGCGTCGCGAAAAAACGCCTTCAAAATCAACAGGGCAGCCGTTCTTTAACAAGATGGGTTGTTGTAAAAATGTTGGTAGGATGTGGAAGGCGAAAAAATGCCATTCAGTACAAAGGGTTACTTTTAGT # Right flank : GCCCAGGCTCTTCGCGCCTGTCACTCGCCGCCCCTTTCCCGCCACATTCTTCAGTAACGTTTATACTTCAAAGCCCTTGTTAAATTTTGAACACTGCGCAACGAAGGAGAGGCTATGCGAGTACACCATCTCAACTGCGGTTGTATGTGTCCTTTGGGCGGCGCGCTGTACGATGGCTTCAGTAAAGGGCTGCATGCGCACCTCATCTGCCACTGCCTGCTGATTGAAACCGACCATCACGGGCTGGTGCTGGTGGATACCGGCTTTGGCTGTGACGATATGCGCCATCCGCGCCGCCGTTTACCACTCTTTTTCCGGGCGCTGAATAATATCCAGTACCGGGAATCATTAACGGCGCTGCACCATATTAAAGCGCTCGGCTTTAAGCCGGAGGACGTCCGACACATTGTGCTGACGCATCTGGATTTCGATCATGCGGGTGGGCTGAGCGATTTCCCGCAGGCGCAGGTGCATCTGATGCAGCGTGAAATGACGGCTGC # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCGAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCGCGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //