Array 1 583256-584956 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770225.1 Scardovia inopinata F0304 supercont1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 583256 36 100.0 28 .................................... GGATACTTCCACGGATTCCCCCAACGGG 583320 36 100.0 28 .................................... GTTCTATTGCAACGATTTTCGCAAACCC 583384 36 100.0 28 .................................... CAGACACTGTTGTCTCGGGCTCGGATGG 583448 36 100.0 28 .................................... CGATCCCGCGTAAACCGGCGGGCAGCAC 583512 36 100.0 28 .................................... AGTCTTGGAATGTGGGCGATGGTGCTAC 583576 36 100.0 28 .................................... GGTTGTCCGAGGAATTTTCGTGGGTATG 583640 36 100.0 28 .................................... GCAGTATCGCGTCTCAGTCATTTTGCCT 583704 36 100.0 28 .................................... AGAAACGCCGCAGAATTATCCTTCAAAA 583768 36 100.0 29 .................................... AAAGCCTGGTTAAGCACACCAGTAGTGTG 583833 36 100.0 28 .................................... AAGTCGCATAATGACCATCACCTATAAT 583897 36 100.0 28 .................................... TCCGGGGATACCAGTGTTAAGCGGGTCA 583961 36 100.0 28 .................................... CAGACACTGTTGTCTCGGGCTCGGATGG 584025 36 100.0 28 .................................... AGGCAGAAGAATGACTCAACTGTCTGTG 584089 36 100.0 28 .................................... CTAACACCAACAACCACAGCACCAATCA 584153 36 100.0 28 .................................... CCACAAGTATAGTCTGGTGGGGGCGCGA 584217 36 100.0 28 .................................... TGAAAACCGGCGTATACTGGCTCGCCTG 584281 36 100.0 28 .................................... CTCGCGTAATAAGATCGTTGATTTTTAA 584345 36 100.0 28 .................................... CAAGGGAAGAATGGCAGGGGCAGGTAAT 584409 36 100.0 28 .................................... CATGATGACGATCATGCTCGGAAATGGT 584473 36 100.0 28 .................................... CTCGCTTTCCAGTTTCCTGATTTCGCTC 584537 36 100.0 28 .................................... CAGTATCTCGGGCTACTACCAGGTAGCG 584601 36 100.0 28 .................................... CTTCTCCTTCGCCTGAGTCTGCCTGCGC 584665 36 100.0 28 .................................... CCAAAACGAAAGGAACTTGTTATGGGAA 584729 36 100.0 28 .................................... CGTAATGAGCGTGGATGAGGAGATTTAC 584793 36 100.0 28 .................................... AGGATATCCACCCATATGCTTCTGTTCG 584857 36 100.0 28 .................................... GGGCGCTAAATAGAGCCTCATTAGTAAC 584921 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 27 36 100.0 28 CCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGC # Left flank : GTTTAATGGTTCAGGATTCACTATTCCAAGTGTCCTGAATGATTTCGCTCAACAATATGGTCTTTATGCGGAAGGGAAATTAGACAAATTACCAGTTCCGCTGTTTAAGGAAGAATAATGAAAAAAGACGAGGATAGTGGCGGAATGTGGTGTCTTGTAATGTTTGATCTCCCAGTTCAAACAAAAAAACAGCGTCGTGCTGCAACTGAGTTTCGTAATATTCTTCTGGATTTAGGGTATGCAATGGTGCAATATTCCGTTTACGCAAGATATACACCAACTCAATCTGGGAACAGAACCACAGTGAAAGTTATAAAAAGGAATTTACCGCCACAAGGAAAGGTGCGAATTCTTCACATCAGTGATCATCAGTGGTCTAGTGCAGACCGATATATTAATTTAAAGAAGGAAAAAACTGATGAAACCCCAGATCTGTATGTACTTTTTTAAACGTAAAAAGTACAAAAAAGCTTGAAATCTTCCTCTTCTGAGGGATTGCT # Right flank : CGCCAAGAGCAGCAAAAGAAGCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTAACCCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGCGCCAAGAGCAGCAAAAGAAGCAGTAAGACCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGCGCCAAGAGCAGCAAAAGAAGCAGTAAGACCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGCCCTCGAACAGGATACTCGTCAGCATGTGCCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGCAAAAAGCTTCGTAAGGCATCGGCTTTTCCCACTTTATCGGAAGTGGAAGGCCTATATGCATTAGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCATTTTATCAGAAGAGGAAGAGGATAATTCCAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 585391-585166 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770225.1 Scardovia inopinata F0304 supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =============================== ================== 585390 33 100.0 31 ................................. TGGCACATGCTGACGAGTATCCTGTTCGAGG 585326 33 100.0 31 ................................. TGGTCTTACTGCTTCTTTTGCTGCTCTTGGC 585262 33 100.0 31 ................................. TGGTCTTACTGCTTCTTTTGCTGCTCTTGGC 585198 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =============================== ================== 4 33 100.0 31 GCTTGGAATTATCCTCTTCCTCTTCTGATAAAA # Left flank : TTTTCTATCTCTCACCCTTTATAATGCGTCCGCATAGCACGAATTACGATAATTTCTGGTTACTATTCTAACTATATAGTTCTGTTGCTGATCTACTTTATAGACAAGTCGGCTGAATACCAATTCTTTGCGGGCAAAGACCACTTAAAAAGGCCACTTAAATCACCACGAAGCTTCTCATAAGAGGGTTATAAGGCTAATAGGCCTTTCTTCAAACCCTGAGAAACACATCCACATGTTTCATTAAGAGCAAGAAAGAGCGAGAATCTGTTTTATTTTCTCAATGTCTTTAAGCACATGCACAGAAATACGATTCTCATAGGCCATTACTACGCTTTAGTTTCTGCTAAATTAATCACAGTCAGGGAGACGCTGCTGTCTACGCAGAATTCCACACCAATAGAGCGCGGATAATTATGACTAACTTAGCAACATGCTAATGCATATAGGCCTTCCACTTCCGATAAAGTGGGAAAAGCCGATGCCTTACGAAGCTTTTT # Right flank : TGGGTTACTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTGCTTCTTTTGCTGCTCTTGGCGCTTGGAATTATCCTCTTCCTCTTCTGATAAAATGGGTTACTAATGAGGCTCTATTTAGCGCCCGCTTGGAATTATCCTCTTCCTCTTCTGATAAAATGGCGAACAGAAGCATATGGGTGGATATCCTGCTTGGAATTATCCTCTTCCTCTTCTGATAAAATGGGTAAATCTCCTCATCCACGCTCATTACGGCTTGGAATTATCCTCTTCCTCTTCTGATAAAATGGTTCCCATAACAAGTTCCTTTCGTTTTGGGCTTGGAATTATCCTCTTCCTCTTCTGATAAAATG # Questionable array : NO Score: 2.66 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTGGAATTATCCTCTTCCTCTTCTGATAAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.64%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [10.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //