Array 1 5259696-5259291 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JADBEG010000001.1 Amycolatopsis lexingtonensis strain DSM 44653 Ga0310414_01, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence        	Spacer_Sequence                             	Insertion/Deletion
==========	======	======	======	=======================	============================================	==================
   5259695	    23	  91.3	    44	..........C.....A......	GCCCCAGTGTCCGATTTCCGCCGTGGACCACCGGAGGGAGGCCG	
   5259628	    23	  91.3	    38	T.........C............	GCCGCTGTCAGCCGTCCGCACCCGCGAGAGGAGCCGTG      	
   5259567	    23	  95.7	    38	.T.....................	ACCGAAGCCCATCCGTCGGCACGCCCGGAAGGAGAGCC      	
   5259506	    23	 100.0	    38	.......................	CCCCCCGCCATCCGTCCGCACCCGCGAGAGGAGCTGTG      	
   5259444	    23	 100.0	    40	.......................	ACCGCAGCGACCCCAGCCCGCGCCGCCCGGAAGGAGAGCC    	
   5259381	    23	  91.3	    44	T.........C............	CCCCACCGCATCCCGTACCGCCCGGCACGAGAAGGGAAACGTCA	
   5259313	    23	  87.0	     0	..A.......C..T.........	|                                           	
==========	======	======	======	=======================	============================================	==================
         7	    23	  93.8	    40	CCGTGCGCAATCGCGAGTCCTGA	                                            	       

# Left flank :   AGGCTGCGCGTCGCCAGATGCGTGTACAGGATCGCGATCAGCGCCGTGACCAGCGCCGGCGGCAGGAGCAGCACCCCGGCGAACGTCCAGACCGACGTCAGGTTGATGTGCGGGGTGTCCGACACCAGCCGCCGGACGCGCTCGACCTGCCGGCCCAGCTCCGCCTGCAGCACCCCGAGCCCGGCGAGCACCCCGAAGACGGCCAGGTCCCACGCCCGCACGGGCACCACGGCGGCCGTCCAGACGGTCGCCACGAGCGCCACGGACTCGACGAGGAAGCAGTAGAAGACGAGCGGCCGGCGCTGCCGCCAGAGCGTCCAGCGAGCAGGGTTCAGCGCCCCTCCGATCCGGGCCGAGTGCCGTTCGGCCGGACGGGCGCCGTCCATACTCAAGGCGGTCCAACTCCCCTGGGTGAGCCGACGATCCGCGTCCACCCCACCACACCGGGCGGCCGCGATCGACGATTGCCACACGATCGGAGCAGCGAAGGGAGGCCGCCG
# Right flank :  AGGAGCCGCGGGCCCGGGTGGGCCGCTCAGGCGGTCGCGCCGCCGTCGACCACCAGGTCGTGCCCCACGGTGAAGGCGGCTTCCTCCGAAGCGAGCCACAGCACCGCGGCCGCCACCTCGGCGGTGGCACCCACCCGGCCCAGCGGAATCGCGCCCTTGAGCCGCTCGGCGCGATCGGCGTCCGTCTCGCCGGGGCGCCGCGACATTTCGGTGTCGGTCGCGCCCGGGCTGACCGCGTTGATGCGGACGCCCTCGGCGATGTGGTCGCGCGCCGCCGTGCGGGTCAGCGCGCTCACCGCGGCCTTCGACGCCGCGTAGGCCGCCATGTTCGGCAGCCGCCCGTGCGCGCCGATGTTGGACGAGATGTTGACGATCGCGCCGCCGCCGTGCGCCCGCATGTGCGCGACTTCGTGCTTGAGGCACAGCCACGTCCCGGTGACGTTCGTGGCCAGCACCGCGCCGAACCCGTCCTCGTCGATGTCCGCCGCCGGCGCCGGCGA

# Questionable array : NO	 Score: 2.51
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CCGTGCGCAATCGCGAGTCCTGA
# Alternate repeat :   TCGTGCGCAACCGCGAGTCCTGA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [4,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-2.20,-2.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [5-5] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [18.3-28.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,0.64   Confidence: HIGH] 

# Array family : NA
//