Array 1 99975-103186 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEKW010000022.1 Acinetobacter baumannii strain MRSN395 MRSN395_contig00022, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 99975 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 100035 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 100095 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 100155 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 100215 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 100275 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 100335 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 100395 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 100455 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 100515 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 100575 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 100635 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 100695 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 100755 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 100815 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 100875 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 100935 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 100995 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 101055 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 101115 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 101175 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 101235 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 101295 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 101355 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 101415 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 101475 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 101535 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 101595 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 101655 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 101715 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 101775 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 101835 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 101895 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 101955 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 102015 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 102075 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 102135 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 102196 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 102256 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 102316 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 102376 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 102436 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 102496 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 102556 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 102616 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 102677 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 102737 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 102797 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 102857 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 102917 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 102977 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 103037 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 103097 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 103157 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //