Array 1 1535104-1532891 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP022544.1 Bifidobacterium pseudolongum strain UMB-MBP-01 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 1535103 36 100.0 28 .................................... TTGATGCAGATGAGTGGGGATGAGACGG 1535039 36 100.0 28 .................................... GCACGCTCTGCTAACTTTCTCTGAGTTA 1534975 36 100.0 28 .................................... GGATCCGTGACCGCGCCTTTCTCCCAGT 1534911 36 100.0 28 .................................... TTGGCCTGCTGCTCCTGCGTGCCCTCCA 1534847 36 100.0 28 .................................... TCTGGCTCCGCAACGGCCCGTTCGTGTT 1534783 36 100.0 28 .................................... ACCCGGTTGTCCGCGTCCGTGCTCGTAT 1534719 36 100.0 28 .................................... AAATCGAGCAGCGCCTTGTTGAACTCGT 1534655 36 100.0 28 .................................... GGGAGTTCGCGGACGATGAGACGGCTGC 1534591 36 100.0 28 .................................... GTTCCGTGTCGCCCATGTAGAGCGCTAC 1534527 36 100.0 28 .................................... ACAAGCCTTGCCCAAGCTCCGTAAGCCG 1534463 36 100.0 28 .................................... CCCGATATGCGTTGCGCGACACGCCGAT 1534399 36 100.0 28 .................................... CCGCATAGGCATGATACGCAATGCATAC 1534335 36 100.0 28 .................................... CGCGTTCAGCGAGAACCCACTACTTCAG 1534271 36 100.0 28 .................................... TCATAGTCGCCGTACTGTTTCTTGACAC 1534207 36 100.0 28 .................................... CTGCCCGCGTTCACGAGCCAATCCACCA 1534143 36 100.0 28 .................................... TGCAGTGTGTGGATGCGTTCGGAAACAT 1534079 36 100.0 28 .................................... ACTGATATTCATGACATCGAACAAGCTG 1534015 36 100.0 28 .................................... GCGCGTGTGCAGCGGGCTTGCGGCAGTC 1533951 36 100.0 28 .................................... ATGGAAATAGTCAGGTTACGCATGGTAA 1533887 36 100.0 28 .................................... GACGATGCATCCGAGTGCATTCGCATAG 1533823 36 100.0 28 .................................... GCGATCGTGGGCGCGAACACGGTTTTGA 1533759 36 100.0 28 .................................... TGCCAAGCGCATAATGCCTTCCACACTT 1533695 36 100.0 28 .................................... GCGTCGAACCCCGCCGGTGACTCCACAC 1533631 36 100.0 28 .................................... GGTTTTAAAGTACATAGTGTGTCACATT 1533567 36 100.0 28 .................................... GCGCTCGCGATACGCCGTGATGACCCAC 1533503 36 100.0 28 .................................... TAGTCGAACGCGATCCACTCGGCGAGCA 1533439 36 100.0 28 .................................... CGCACATTCTGTCGCAGATGACGCCGAT 1533375 36 100.0 28 .................................... AATCCGCCCGAACCACTCCAGCTCATAA 1533311 36 100.0 28 .................................... CAATTCCGTGTCATCCTTGGAGATTGGC 1533247 36 100.0 28 .................................... TGGGCATGGCGAGGGAGCTCAACGTGCT 1533183 36 100.0 28 .................................... GCTTTGGCGAGTTCGTTGATCGCGTTCG 1533119 36 100.0 29 .................................... CGCTGCTGTGCGTCAATAATGGCCCGCAG 1533054 36 100.0 28 .................................... AAATCAGCGCAATGGGCCAGCGGCCTGT 1532990 36 100.0 28 .................................... GCAGCTTGCACAACGTTGGGATGCGCGC 1532926 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 35 36 100.0 28 CAAGTCTATCAAGAAGGTAGGAAGCTAATTCTCAGC # Left flank : TTCCATGATACGAGGGTTGACAATACCGTCGTCGATTATGGATTTTGCGCAGTGCTTCGCTATCTACTGTGAGTCAAAAGAACGCCAATTAGATGTCCCTGTATTTGGAGAAGAACATGAAAAAGGATGAGGAGAGCGGGGGAATGTGGTGCCTTGTGATGTTCGATTTGCCAGTGGGGACTAAAACTGAGAGGAGAGAGGCCACACAATTCAGGAATCTACTGTTGGATATGGGATATATGATGGTGCAATTCTCGATATACGTACGGTATACTCCGACGCAGTCTGGTAATCGTTCGACGGTGAGAATGATTAAAGAGCATTTGCCGGCCGGCGGGAAAGTGCGTGTATTACATATCAGTGATCGACAGTGGGCTAATTCGTTGAGATTTTATAATCAGCATGTCGAAACGAAGAATGAAACACCAGAAGTGTGCACGCTTTTCTGAAGATATTTTCCTGTAAGGAATGTTGGAAAATCTACCTTCTTGATAGGCTAC # Right flank : TTTATTGAGGTATGTTCCGCATTGACCGGCGCCGGCGCCTATCTGAAAAACGTTTGCCCCGCATGCGCGGGGATGATTAATGATCGTCACTTGAGCATGGAACAGCTGGCAGCGGATGCGCATGTCGATGTGCAAGCTGTGCGTTCGTTGTATGACGGGGGATTGGCGAGTTTACGCGATACCCGCCGTGTGTTCGCGGTGCTGGGAATTCATGTACATTCGTATCCGGTTGAGATGGTGACGATGTCGCTATGAGCGATGTATTGCACGTGTGGATGGCAATCGATGCCATGTGGGTATGTTCATCCGTGACGATGACGATCTGGTGGAGTTTCGGTACGATTCCGATGCCGGCGCGCCAATTAGCGTGAGTTTGCCCCTCGATGGTACTTGGGATGAGCAAGCGCCAGAAGCGTTCCTTGACAATCTCCTCCCCGACGAGGAGACTGCCCGCCATGCCATGCTGTTTCGCTTGGGCGCGGCGTCGACTGACGTGTTCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTCTATCAAGAAGGTAGGAAGCTAATTCTCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //