Array 1 36121-38195 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOQA01000039.1 Paraclostridium bifermentans subsp. muricolitidis strain PAGU 1678 sequence039, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 36121 29 100.0 37 ............................. AATACATACCAAGCCTTACTTAATTGAGTTCTTCTAC 36187 29 100.0 37 ............................. TCGTCTGTTTTATATGTATAAGAATATCCCGAACCAT 36253 29 100.0 36 ............................. AAATTTAAGGAAAATAAGACTAATGTTGTAATGCCT 36318 29 100.0 36 ............................. AAGAGATTGGGATAGTGTTGTGTGCGCTACATGTAG 36383 29 100.0 37 ............................. ATGATACGGGTAGGGAATTAACCTATGGTTATTATCA 36449 29 100.0 37 ............................. TAATTATGAAAGAAAATGAGATTATCAAAGAATATGA 36515 29 100.0 37 ............................. TATATAATAACTGAAAATGATTTAGAATACACGCTTG 36581 29 100.0 37 ............................. TTGATATTATTGACTCAAAATTGCATGATCCTTGCTT 36647 29 100.0 36 ............................. TAAAATAGGAAACTTATACAAGCATATCTAATATAT 36712 29 100.0 37 ............................. GAATTTAAATGGTGAGAAATATTTAAGTCAACTTTAT 36778 29 100.0 38 ............................. TAAACAAAACTATTAAAGATGCTGATAAGGAGTTCCAA 36845 29 100.0 39 ............................. CAACAAATACACCCCATAAAACGGGTAATATTATATTCT 36913 29 100.0 37 ............................. TCATATGAACATCTTGAAATAGCTTCTTTTACAAAAG 36979 29 100.0 36 ............................. AGAGTTTGAACTAATGGTATTTGATAATATAGAAAA 37044 29 100.0 36 ............................. TTTTTTATTACTTATAAAAATAATTACGATTTTTTA 37109 29 100.0 37 ............................. TTGTTATAAATGTTTTTAGTTCTTTCTTTTTTGAATC 37175 29 100.0 37 ............................. TTACAATAAAGGCAAATTTGAAGTTATAGAAGTTATA 37241 29 100.0 37 ............................. CACTTTTTCTGTAGTAAATACTATTGGCGTTGATAAT 37307 29 100.0 37 ............................. GTATTTTCAACTTACATAAAGACAAAAGAAGCTGAAC 37373 29 100.0 37 ............................. GAAGTTAGAACAGCAATAACTAATAATGGTTTAGAAA 37439 29 100.0 38 ............................. ACCATCCACCTCTAATGTAGTTTTACCATCAAAAGACA 37506 29 100.0 37 ............................. ATTCAAAAACTTTTCTATTTCTTGATTAGAATTATTC 37572 29 100.0 37 ............................. AAAACAACAACTAAACCACCAACAACATTCTTCATAC 37638 29 100.0 37 ............................. CATAAAATAAGTAACTATATTTTTGGTTTATATTTAA 37704 29 100.0 37 ............................. TTTGAAGTTCATGAAATTTCATTATTTAACATCCTCC 37770 29 100.0 37 ............................. CAAATAGCAGAAGCTTTTTACACTACAATAGATAAAG 37836 29 100.0 37 ............................. ACGTTAAGTATAACACTTATTGGAATGGGAATATTGG 37902 29 100.0 37 ............................. GCAGGTCAATATAACTCAAGAAGAGATGAACTTAAAG 37968 29 100.0 38 ............................. ATGGATCTATTTGAAAATACTGTTTTTAAAGGTGAAGT 38035 29 100.0 37 ............................. TATTTACTTGTAACAGTACCTACTTTGACTGGACATG 38101 29 100.0 37 ............................. AAACATATAAGAACAAATGGAGATGCTCAAAAAACAG 38167 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 32 29 100.0 37 GTTTTATATTAACTATGTGGTATGTAAAT # Left flank : AGCATTTTATTAAAGATGAAAAATATAAAGTTTTGAAAGCGTGGTGGTAGTATGTTTGTTATCGTTACTTATGATATTGTAGAAGGTAAACCTTTAAATAGAACTAGAAAGATACTTAAAAAGTATTTAACTTGGACTCAGAATTCTGTTTTCGAGGGTGAGATTACAGAAAGTAAATTGCAAAAATGTATGTGTGAGATAGGAAAGGTTGTAAATAAGAGTCAAGACTCTATTTATGTTTATGAAGTTTCAAATCCTAAAAATATAATTAAAAAATCTTATGGAGTACATAAGAACTTTGATGAGATGTTTTTGTAGTTTGCAGTGGGCTAGAGTTGTGATAAAATAAACTGTAATAGTTGGAATATCTTAAGTCAAGGGATTATACAGCAATTTGTACAAATCCTTATAGGAGCCTCACTGCAAAATATCTATGTTTTTGAAGCATATATTTTATAGGATGAAGTTATTGCAAGTCTTTCAGATTGCTAATATTTGGG # Right flank : TATAGCTTATCATTTTTGAGCTTACTTTATTAATTTAATATCAATTATAAATTTAATTAAGTTTTTTAGTAAGTATATATAATTTTTAAAAAGTTTAATTTAGTATATGCTATTAAACTTAATTATAATTAATAATTCCAATTTAAAATATTACATAAGGTAATTATATTTGATATACTTTATGTAATATTTTTTTACGCTTAAGGAGGAAATAGAGTGGGTATAAATATTAGAAAAGAACAGTTGAAAGATAGAGAAGAAATATATAATCTAATAAAGGAATCATTTAAAAGTGCAGAGCACTCTGATGGAAGTGAACAAGATTTAGTAAATAGACTTAGAAACTCAGGTAGTTATATACACGACTTATCACTTGTAGCAACTTGTGATAAAACTATAGTTGGGCATATTATGTTTACTAAAATATCAATAGAAAACAACGACTTAAAGACAGAATCACTTGCATTAGCTCCACTTTCGGTATTACCTAAATATCAAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGTGGTATGTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [70.0-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //