Array 1 239758-237349 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG770777.1 Roseomonas cervicalis ATCC 49957 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 239757 29 100.0 32 ............................. ACCATCCGGTGAATAGCCCAGCGTGAAGCCCC 239696 29 100.0 32 ............................. CGATCGGCGGCGAAAGGAAAGAAATCGCTCAG 239635 29 100.0 32 ............................. GAAGAACCTTTCCTGACCGCCGCCTACGAGAT 239574 29 100.0 32 ............................. CAGGTGTTGACGCAGGGGACTGGAGGCAGCGC 239513 29 100.0 32 ............................. TATTCGAACTGGACGCCGCCGCCCTGGAGCTT 239452 29 100.0 32 ............................. CTTTGGCGTCTTTGCCGTGGAGCGCCGTGGCT 239391 29 100.0 32 ............................. GTGTTGCTTGCGTTCCAGGCATACCGAGCGCA 239330 29 100.0 32 ............................. CACACAATCGATTGTTTTAGAACGATAAAAGC 239269 29 100.0 32 ............................. CCCCGCCTTGCAGAGTGAGTGGCCTATATGTT 239208 29 100.0 32 ............................. CGGGGAGGGCGCCATCGCTCCCCTCACCACGC 239147 29 100.0 32 ............................. AGCGGTTCGCGGAGTTCGGCCAGGGATTTGCG 239086 29 100.0 32 ............................. GCCGAGGCGACCATCTGCCTGCTCAACCTATC 239025 29 100.0 32 ............................. CCCGCCCGCGTTCGTCCACCTCGATCCCGTTG 238964 29 100.0 32 ............................. TGTGGCTCCGTCGCTTGATCTATGCTTTCGCG 238903 29 100.0 32 ............................. GTGTTCGGGGAACTGTTCGACGCGAACGCGTG 238842 29 100.0 32 ............................. GCAGAGGCGACCATCTGCCTGCTCAACCTATC 238781 29 100.0 32 ............................. ACCACGCTCGCCGGGGTCGCTGCCCTGCGCGC 238720 29 100.0 32 ............................. TCGTCACCGTCATTTCTGCTGCCCTCAGCCGA 238659 29 100.0 32 ............................. GTGGAGGACTTGGCGCGCGCCAACCATGAGCT 238598 29 100.0 32 ............................. CTGTCGAAGGGCAAAAGCCGCGGCCGGATTGA 238537 29 96.6 33 ............................A GGGGAAGTTCTTCTCCCTGAAGGTGCAGCCCCA 238475 29 100.0 32 ............................. GTCGCCTTCGACCGCTACAACTGGCGTCACCT 238414 29 100.0 32 ............................. AACGGATCAGTGAACCCGGCCACACGCTGAGC 238353 29 100.0 32 ............................. TTCAGCAGCATCGGATGCCGGCGCTTGCCCAT 238292 29 100.0 32 ............................. GACCCGAGGCGGGCCAGCCTCTTCGGCTTATG 238231 29 100.0 32 ............................. GCGGCCTGTCCGTCGCGTCGAATGTGCGGACC 238170 29 100.0 32 ............................. CGGCACAGGGGCTCATTGTCGAGGACAACCAA 238109 29 100.0 32 ............................. CCATTCATCCGTGCCTTGCAGGAGGTTGGTGT 238048 29 100.0 32 ............................. CGCATCCAGCTTCGCTTGATATCCGCTATCTA 237987 29 100.0 32 ............................. TCTACCGGCACCTTATAGTGGTTAGCGACAGC 237926 29 100.0 32 ............................. GCGAAGCTCCCCATCATCCAGGTCGCCGCGCT 237865 29 100.0 32 ............................. CTTTCCAGGATTCTCCGAGCCCCTGGCCTCCC 237804 29 100.0 32 ............................. ACGGTCGAGCTGATCCACCTGATGGCCCGTAA 237743 29 100.0 32 ............................. CACATGTCGTCGGCCGAGGGGATCGCGCAGAC 237682 29 100.0 32 ............................. ATACCGAGCGCAAGCGGCGCGTGATCCTGGAG 237621 29 100.0 32 ............................. TGGCCGAAGTCTTGCAGCGCCGCGGCGATCTA 237560 29 100.0 32 ............................. GCCGATGCCTGGCCGGGCTGGGATGACCGGCT 237499 29 100.0 32 ............................. TCGAACGGGGTGCGAGAGGGCTGGCCGAACAT 237438 29 100.0 32 ............................. TGCCCGACCAGCAGTTGCCGGGCGTCGTGCGG 237377 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 40 29 99.9 32 GTGTTCCCCGCAGGCGCGGGGATGAACCG # Left flank : GTGGAGCAGGTGCTCGCCGCAGGAGGCCTCCCTATGCCCGAGGCACCCCCAGAGGCGATGCCTATCGCAATCGCCAATCCAGAAGGCCTGAGTGATGCTGGTCATCGTGGTTGAGAATGCCCCGCCGCGCTTGCGGGGGCGCTTGGCTGTCTGGCTGCTGGAGGTCCGCGCGGGTGTCTATATCGGCAGCCACGGCCGCCGGGTGCGCGAAATGATCTGGGAGCAGGTCTGCGCCTATATCGATGACGGAAACGCCGTGATCGCCTGGGACGCCCCCAACGATGCTGGCTTTGAATTTGATACAAGCGGTAAAAATCGCCGCATCCCGATCGATTTTGATGGCTTCCGCCTGGTAAGTTTTGCCCCAGAAGCCGCCTTGCCAGCAGAGCCCGGCCCGGCGAGCCTTACCTCTCGCAGACGAGGCCGCTAAACAGCGGCTCTGCAACGGTGCGCTCTTTGACAGCCGAAAACAGAATGAATTACAAGAGTCTCCAGGAAGA # Right flank : TCGCTAGGCTCGTGTACCGCGCTCGGTTGTTGAGACACCTGGGTGAAGCCTAAGCGGCGAGCGCCGCGGGTGAAAGCTGATCCTGACGGACGGCGCCCGGTGGCCTGAACCCGAGCCGCTCAATGAGCCAGGTCGAGTTGTAGGTGCGCCGGAACTCGAGGAGCGCCTGGCGGCCCTGCTCGCCGTACCGTTCCTCGCTGCCGCCGCGCCGCCGGGTGGGCTTCGCGTCACCGACATGCTCGGCCGTGGCGTGGTGCTCCCACGCCGGCCGCAGCGGATCCTCCTGCTCGATGCGCGGGATATCGTGAGCATGGCGCTGCTGCATCCGAACTCGGCCAGCCTCGTCGCCGGCTGGGCGGGGGCAGAGTTGCTCGACAGCGACCTGCTCCGCCGCACCTACGATACGCCCCCCCCCGGCGGCGGGCCGATCCCCGTGGTCGGCGGCGTGGCGCCAGAGTCCCGCTCCCTGGAAGCGATCCTCGCCCTGGCGCCAGACCTTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGGCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCAGGCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [38.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //