Array 1 13513-12023 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000182.1 Nostoc sp. 2RC NODE_182_length_15927_cov_10.289, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 13512 37 100.0 34 ..................................... GCATTGGGGACTGTGCAAAACTGGCTACAAGGTC 13441 37 100.0 33 ..................................... TCTTCGTAGTCCGACATAATTTCTACTAAGTCA 13371 37 100.0 35 ..................................... GAATCGAATTACAGCGATGGATTTTTCCACAGAAA 13299 37 100.0 35 ..................................... TAGATTGAGCGATCGCACTCATTTCCTCTGAGAAA 13227 37 100.0 35 ..................................... TGGCATCAAAAATAGTGAAGGTAACTCATTTGATA 13155 37 100.0 34 ..................................... TTTAGAAGCCACGATGTATCCTAATGCCATGATT 13084 37 100.0 34 ..................................... GATAACTGGGTGGGATTCCCACACTTGAATCGGA 13013 37 100.0 43 ..................................... AACCTCTTAAACGCCGTATTGAATTCGGTCGTGGTGGTTGGCA 12933 37 100.0 33 ..................................... ATGCTCTCAAGTATTATTGATGATAATTTTGAT 12863 37 100.0 35 ..................................... TCTCGAAACTGCCAGTACAATTCTGCTTTTAAGTT 12791 37 100.0 35 ..................................... AATTTCATGTTTTTATGCTACCTCTAGCCCATTTC 12719 37 100.0 36 ..................................... ATTCTCTCAAAATAAGTATAAATAACAAAATCTTTA 12646 37 100.0 40 ..................................... TTCCAAGACCTCACCGCTACAAGGTACAGTACCAATACTA 12569 37 100.0 35 ..................................... TAGAATTAACCTTACCCTAAATCTGCCCTAAAATC 12497 37 100.0 34 ..................................... ATGGGAGAAAGGATAGCTAGAGTGGAAGCGAAGG 12426 37 100.0 34 ..................................... AACACCGCGATGCAGTCAGCCCTTGACCACTTAG 12355 37 100.0 36 ..................................... TTGATTTCATTAAGCGCTTGACTGGCTGTACTATTA 12282 37 100.0 43 ..................................... ACTCGCCAACAATCATTTCCTTCAAAATCAGGACAGAAATAAA 12202 37 100.0 33 ..................................... TTAAGCAATTCTGAGTAATTATCCCCGACTAAG 12132 37 100.0 36 ..................................... TTTTCCTGTGGAATCTTCTCAAAAACATCAATGTCA 12059 37 97.3 0 ...........................C......... | ========== ====== ====== ====== ===================================== =========================================== ================== 21 37 99.9 36 GTCTCCAATAACAATTTGGAGGCGAATTAATGGAAAC # Left flank : GCATGGATTTGTAAACCGGCGGATACCAGCAAAAAAATGATAATAAAAGCGATGGGCATTGCCAACACAACCCATTGCCACAGCTTTAATCGCACCATTACCCTACACCTTTTAAATCACTCTTGTAAAAAGTTTATCGTTTTCGATTTGGGTAGGATAATCGTTCTATGGATTGAGTTATGAGTTATGAGTTATGAGTTATGAGTTATGAGTTATGAGTTATGACTGATGACTGGGGGTTTTAGCAATGATTTGCGCGGAGCTTGGCTGTTTTTTTAGACAGTAGAATATTTAAGGCTGAAATCTTTACTGTGATTGTATTTGAGCGATTTTTGCTAAAAATAGATCCGCGCAAGCTTTGAAAAGGTTGTGTTATAAGGTTTTCAACGATTTTTGTTTAACCCAAATCTTGACAAGCGATCGCTCAAACGTTAATTTTGAATAGACCCGCGCAAACAGGCCTTACAACCCTGTTTTTGCAAGCCTCCCAGAGTCTTGCT # Right flank : ATACGTTCATAAATTTTAAACCCGCTCAAGCGGGTCTATTTGTTTAGATACTGTCTATAATCCAATACGATTTAGTTAAGCATTTCTTCCTTCTCTTTGCGTCCTTTGCGTCCTTTGCGGTAGCCTGCGGCAAGCCGCTACGCGTCTACGTTAAAAAAATTGACATTGACAGAGACTTTTAGCCTTAACTAAACCGTATTAGTTTATAATCCAATACACTTCAAATAACACCAAAACACTTGTATACGGCGATTTATCGCGTCTAGTATTCCTCTGTCTTTCTTGATAAATAGAAGAACTAAATTAAACCTAACTCGATATCGCCGGGTTTCCACACTTCGACAGGCTCCCTTCGACAAGCTCACGGCGGCGCAGTGCATCGCTGCGCTCAACCCTCTTGGAATAAGCTTAACGAGCATTGAGCAAAGTCGAAATGCATCTTCTAAATAATTGTGTCCACCTACTTCAACTAAACCTTATTTAAAATTCTGAATTCTGAC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCAATAACAATTTGGAGGCGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 8658-9057 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000193.1 Nostoc sp. 2RC NODE_193_length_15220_cov_9.20372, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 8658 37 100.0 39 ..................................... AGATTGAAAAACATACACGCCAGTCAAAGAATTAGTTGG 8734 37 100.0 34 ..................................... AACCTTTGTAAAACCCCATTAATGTATGTGCGGT 8805 37 100.0 37 ..................................... ACCTTTGCCATCTTCGGTAGAAGGGTATGCGAAGAAT 8879 37 100.0 35 ..................................... AATTCAAGCAATAAACTTCATGAAATTTAGCAGAT 8951 37 100.0 33 ..................................... TCGCCTTCAAATCCTCAATATCTTTGAAGCTTC 9021 37 97.3 0 ................................A.... | ========== ====== ====== ====== ===================================== ======================================= ================== 6 37 99.5 36 ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Left flank : CCAATATGCCAGGAGCCGTACCTTGGACAGCAACTCAGGCACTCAATAACAGTACATTACCTTATGTTGTGCAGTTAGCGAACTTGGGAATTAAAGCATTAGAAGTAAACCCAGCCTTAGCTAAAGGTGTGAATGTGCAGAATCATAAATTAGTGCATCCTGCTGTGCAAGAGGTTTTTCCTGATTTGGTGAGTTAGAAGCTGTGCAAGTGTTGGGCGATCGCCTATGCTAATGGTGGTAATCTTCATCAATTAGACTAATTTTGTTACCAAATGCGCGGATGGGTAGCTGTAGAAAATCAAAGCTAGCAAAAAATGCCTGCATCCCAATATGTACAAGGTTTTGAGGACTATAGAACTTTTAAACCATCCGCGCACCTTACGGAGACTGAGTTTCAGCGATTTTGAATTGTTTGACTACCGTTTCCTGTGTTATCATTCTGTACATCCGCGCAACTGCACCTTGAAAACCAAATACAGCAAGCCTTTTTAGTGTCGGCG # Right flank : CTCTGATTTTTGAGCTTGTACGAAATAAAAGCCTTGAAGTTACGCCGGTTCTCGATGCAGAGGAAGACGTAGCAAGCATTTGAGAACAAGAGTCATATTGAATAGCGATCGCCATTACGATTGTATCGCTGGAGTACTGGCATTTGAGGTCATTGTTGCCTTATCGCCCTCAGACTCAGTACAATATTTCACCCATTCAGTGTATGGCGATCGCTTTCCTCTTTGGATATGCTTTAAGAAGTATTAAAACTAGACTCCTGTTTTTCGGTATCCGTATCTGAGCAATTGTAATTATTAAACTGACAAACTTGAGAAATTTAACAATGAAATCCTTTTCTATTCCCTTAATTGTTGTAATGAGCGCACTTGCTCTTCCCCAGAGTGCCTATGGTAACGAACAGAATGTCCCAAATGCAACAAGCGATGGCAATCAGGCTGAAGCTTTATTGACTCAACCCGCCAGCATTAATACTAAGTGGAGAAATTTTAGCGGACAGACT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTAACTAAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 1 30225-31864 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000021.1 Nostoc sp. 2RC NODE_21_length_40978_cov_12.0294, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 30225 36 100.0 36 .................................... ACAGGGGAATACAGAATATCTGTATAAATCTTTAAC 30297 36 100.0 37 .................................... TCAAAATAAAGTCCCCTGTTTCTGCTTCCAGAAAATA 30370 36 100.0 40 .................................... ATTTCCCATGCCATTATCCACGGTGCTAAGTTGCCCGTGA 30446 36 100.0 36 .................................... AAAAAATACCTCTAGATTTTAGCTCTAGAGGTATTT 30518 36 100.0 39 .................................... GCAATAATGGTTACCCGCACAAGTGCATAACCAAGAAAC 30593 36 100.0 38 .................................... ACTGTAGACATGACTGTTACCTCGTTTAGGTCAATACA 30667 36 100.0 37 .................................... TGCACAGTCCGCTCTTGCGTATTGATGATCAACACCC 30740 36 100.0 29 .................................... ATTAGAATAGGATTTTAGACAAGTTGCTA Deletion [30805] 30805 36 100.0 36 .................................... TCCACCATATAGCTGATCATCTCCGATGCCGCCTGC 30877 36 100.0 39 .................................... CTTTTTTATCAGATGGGCACTCGGGTGCCTCATCGTTTG 30952 36 100.0 37 .................................... TTTCTTTAGGTAGTTTTTCCTTCCCCACCCCACACTT 31025 36 100.0 37 .................................... TATATTGTAATTAGCGGCATTGCCTCCTGACGTGAAA 31098 36 100.0 40 .................................... CGCCAACTATAATCCTAACACCCCAACCCCAAGCAGAAGA 31174 36 100.0 35 .................................... TTTGTGGGCAATTTTAAGCGCTATATCTCCCCAAA 31245 36 100.0 39 .................................... CAAAAGGATGATACGCGCTAACATGGCCATTAACGGAAA 31320 36 91.7 37 ..........C..C............C......... TTGCTGCCCTATTTCGTTAGCCTGGAATCTGTTCCCA 31393 36 91.7 37 ..........C..C............C......... ATTAGAGATAAAACAACCTGAGTATCAAATTTTTTGA 31466 36 91.7 37 ..........C..C............C......... ATTTGAGCCGCCCAACTAGATTTCCACTCTTGGTTTA 31539 36 100.0 36 .................................... CACGGATGAGCAGACTTGCAAAATATCGACGCGAAA 31611 36 100.0 37 .................................... ACTTACACCGAAGCCAATCTGTGAAAGAGGGACATGT 31684 36 91.7 39 ..........C..C............C......... TCGTATACGTTCTAGAACAGAGTTGTCATTTCCGTAAGC 31759 36 97.2 34 ..........C......................... ACAACAGCAATAATTCCTGTAAAACTTACCAATC 31829 35 88.9 0 ..........C..............C...-...T.. | T [31862] ========== ====== ====== ====== ==================================== ======================================== ================== 23 36 98.0 37 CTTTACCGATTGCTCTAAATCGGAATTAATGGAAAC # Left flank : TTCTCAATAAATCCTTGGACGGGAGCAAAGGTTATGGCTGTATATTTGGTCACGTTTGCTTTTGTCACTGGTTGCAGTCTTGTTTAAATTACTGTAGAATTTTGAGTTTTTATTCAGTGGTTATACTTTGTAATAATTCTCGATTTGGGTAATTAGGAGTTATGTAAGGCTGGGTGAGTTATTGTGACTTTTATATCTTGGCGGAAATTTTGAGGATGTAAAGACCTTTTCATGCGAATGACGAAATTTTTTTTTACAGATGATTTATTTCACGCAGAGGCGCAGAGGCGCAAAGAGGATGAGGAGTTTGAGATGTTCATCGACGCATCTCCCCAAATCGCTGAAACCCTATATTTTTCGTTGAGATGCGTCGATGCTTTACAGGGCAAGGGTTTGAGGTATGTGTTTTACTTAATTCCGCACAAGATGTACAATCTTTTTCAGAGATGCGTCGATTTGGCGGCTGGAAGCCTTACGGGGCAAAGGCTCCTGAACGAACT # Right flank : CCAAAAATATCCAATCTTGTGGGGTGGGCGTCTCGCCCGCCCAGTCCATAGGGCGGACAAGATGTCCACCCCACAAGAAAAAACCCCCGACTTTTTAGAAAAGGCGGGGATTTTATTTTTTTCAACTGCTTATTGCATTAAAATCTGACGGATTAAAATACTCATCACTTCGTCAGCATTGCCAGTTCGTACTAATGGACTCCAGTCGCCGACGCTAGCGTAGCCAATGATTTGCAGATGGTGAATTGTGCCGATAACTGCTTTTGAAGAACCCATTAATAAATGTTTAACCGGTTCTCTTTTGGGTAATGGATTTTGAGCCGGTTGATTTAAGACTGGTATATTTAAGTTCTCGCTATCCAAGTATTGTTGCAGTTCTGATGGATTTTCTACAAACTCTTCTTCTTGTGCCATGATGATAATTAACTCTCAGAATGGGGGTTTAGGGAAAGGCGATCGCAAGCTCTTGCCGGAGGGCGATCGCCTTTCTTATTTGCATA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACCGATTGCTCTAAATCGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 6839-6167 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000401.1 Nostoc sp. 2RC NODE_401_length_7193_cov_9.72962, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 6838 30 100.0 37 .............................. GAAACCACTATGCCCCGTCTCTTGTTGCCTAGATACG 6770 30 100.0 40 .............................. GGAAACCGGTTTCCATCGCTTCCGAAGAAGCAAAGTAAAT 6700 30 100.0 44 .............................. CGAAACTGCTGGTCGTTTGTTTGGCTTGGGATATTGGTATATCC 6626 30 100.0 43 .............................. CGAAACACTAGGAGTTAGTTTTTATCGCCACACTCTAATTCAA 6553 30 100.0 39 .............................. GGAAACACAAGGTATGGCACTTTCTATTTCTTGGGGAGA 6484 30 100.0 39 .............................. GGAAACAATGTGAAGTCAACTGGGGAATTTACGACCTGG 6415 30 100.0 42 .............................. GGAAACACTCTAGTAGTTGTTTTAAAAACTTAGGATTGGGTG 6343 30 93.3 45 ..........C....A.............. GGAAACCCTGTTACTATGCGATAGTAGGAGTTTTTATCACCAGAG 6268 30 93.3 42 ..........C....A.............. GGAAACGCTAATAGCAGGCCCCATGTGTTGATATGGCCGAAG 6196 30 93.3 0 ..........C....G.............. | ========== ====== ====== ====== ============================== ============================================= ================== 10 30 98.0 41 CTTTACCGATTGCTTTAAATCGGAATGAAT # Left flank : GGATTGAGGGGTGGGGTAAAATGGCTGTGGGACAAGCGTTTAAGCTTAAGTTGACACCAATGAACAACCGTTCGCCCCTACAACGTGGTTTATTTACCTGAAAATTGCTGTAAAATCATGTGTTGCGATGTGCTGTGCGACAATGCACCTTGCTAAGGAAGTTTGAAATGTTCATCGACACCACTCGCCGAATGCCCGAAACCCTATATTTTTCGTTAACTGGTGTCGATGCTTTGCAGCGCAAGGATTTGAGCTATGTATTTTACTTAATTTTCCACCGGGTATATAATCTTTTTCAGAGTGGTGTCGATTTAGCGGCTAAAACCCTGACTGGGCAAAGCCTCCTGAACGAAC # Right flank : GGAAACCCATGAAAAAGAGAAATCCTCGACTTTTTTAAAAGAGTCGGGGATTTTTTTAACGGATGATTTTAAACAGCTACTTTCTCAATTGTTTATTGCAAGAAATAATCAGTATTTATCAGTAATTTTTTCAAGAACTTTATCTAAACTTGATATTTTCAAGAAATTCAATCAGCAAAAGCTCTAATTGCTTTCTCTAAAGCAGGTTTTACTTTCTCAAAACAAGCTTTTACTTTCTCATTTTGGTGTTTTCCGCAAGTCAAAGCAAGTTTTACTTTCTCAAACCCCAGTTTGCTTTCTCATTTTGGTGTTTTCCGCAAGCCAAAGCAAGTTTGACTTTCTCAAACCCCAGTTTGCTTTCTCATTTTGGTGTTTTGTATAAGTCAAATGAACTTGGCAGAACTGGTTTTTCAGCTAATAATTTTCTCAATTTGATGACAGTGGGTGAAGGATTGCGTCGCTGTTCTTCCTGCATTCTATGACTCCACTCCAACCAATCA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTACCGATTGCTTTAAATCGGAATGAAT # Alternate repeat : CTTTACCGATCGCTTAAAATCGGAATGAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1919-2729 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000422.1 Nostoc sp. 2RC NODE_421_length_6649_cov_12.0555, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================================== ================== 1919 36 100.0 42 .................................... ATAAATATTGCTGGTTCCACCACACCTTTAGATGGCTATGTA 1997 36 100.0 39 .................................... GCAAGCACTCCTCTTCATGAGGGTACTCGGAGATATTTG 2072 36 100.0 53 .................................... TTTTTGCTGATAAATTGAGGGCGGCCTTTCTCGAAAATTGCTACCACTACAAA 2161 36 100.0 39 .................................... TCTTTGGTGACTAATGGACAGCCAATACAACCAGTACGC 2236 36 100.0 44 .................................... TGAAAATGAACATTACGTTTTCCTCGTTTTATTACTAGTTGTAA 2316 36 100.0 39 .................................... GATTTAGAAGAAGTTAGTAGAGTTAACTTAGCTTCAAGA 2391 36 100.0 43 .................................... TATTGGTATGGAAGCATAACTGCTCTGAAGTAGCCCTCGTCTG 2470 36 100.0 36 .................................... GTAATAGAGTTAGTTGAATCATCAAAGCTAAAGTCG 2542 36 100.0 36 .................................... CGCCTAGTGCCGAGTAGCGCTTTGGATTCCTAGACA 2614 36 100.0 44 .................................... GACAACCAATTGGTATCTGTGGCCGCAGGAACAAGGGCGATCGT 2694 36 91.7 0 ..............A......A........A..... | ========== ====== ====== ====== ==================================== ===================================================== ================== 11 36 99.2 42 GCCGCTTCTCTTCTGAGAAGTGGAATTAATGGAAAC # Left flank : GCAGTTTCAACTGGGATTGTTTATGCTGAGTCAGCATATTATTGGTGTAGCTACAAAATGAACAAGTAAGTTTTTAATAATTATTTTTTGGGAATATAAAGTTAAGTTTTCAATATTACGTGGAGAAAAATCGAACCGCAAAGTACGCAAAGTACGCAAAGAGATAAGAGTTGAAGTAGGTAGCTATGATTAAACAAGTTGCAAGTAGCAAGTATAGTTTTGTAATGGGTATTTGAACGCCACGACAAAATTTGCTGGTTATAAAACTGGGGGACTTAAACCCGCAGAATTTGTTAAATCTCAGAAATTATTGTTTCTGTGCGGCGGGGTCGAGTCTATGGTGCAAATGCTGATTCTCTCGTCAACCCGGCCGATATCCTTCTACACAAGGGTTTCAGGGTTTTTCGCCTCTGTTTTTTCTCTGGAAACAGCCTTCGGTTTCTACCCCGTCGCAAATGGCGTCTGGACATTAGGTGGTGTCAGGGTTTAAAGTAGTAGGG # Right flank : CCAGCAATCTTTCTTCCATACCAACATTACCCTGCAAGCCACCTGTGTGTACCAGCAGCAAACTTTTGCCTTTAGCAAAAAAACCCTGCTGTAATAAATCCATCACGCCATAAAACATTTTGGCAGTATATACGTAATCAAGAGGTACATTGTGCGCCGAGCTAAATTCTTGGCTGAATCGTAGCAACTCCTGATTGACTTTTGCATAGCCGCCGAAGTGATAATCACACATTAATTCCCAAGAAGCAGGAGAATTATATGGACTCGGTAAATCAGAGGCGAGGTAATTTGTCAAGAGATTTTCGATTTCTTTTCCTAGAAAATTGCCATTTTTCAACACCGGAAAAGCGATCGCTTTTTGTCTTTGATTTAATGAAAGCGCAATTCCAGCCAGCGTTGTTGCAGTGCCGCAGGCTAGGCAAATATAGTCAAAGGCGTAGCCATCTGTAGACATCCCTTGATTAATTATCTCTGTACAACCGCGCACACCGTTTAAATTA # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.05, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGCTTCTCTTCTGAGAAGTGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.60,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 16139-16540 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000056.1 Nostoc sp. 2RC NODE_56_length_28379_cov_12.3794, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 16139 36 100.0 41 .................................... GAAGCCACTTTTCAAAACACTGATGGCGATATCACAGATGC 16216 36 100.0 39 .................................... TGGCAAAATCATTGCTGCCTACAGTGGACACATCAGCGA 16291 36 100.0 36 .................................... AGGCTGGCCAGATGCTGCTCCATCCACTCATACTTC 16363 36 100.0 35 .................................... GACCCTGGTGAGTTAGGTAAAGCGTTTTGAAAACA 16434 36 100.0 35 .................................... TATACTGGTTGGTGGCCCTCTGGTAATTTCCCCAC 16505 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 6 36 100.0 37 GTTTCCATTAATTCCGATTTCAGGGAATCGGTAAAG # Left flank : AACACTGATAATCCAGAGGGAGAAATTAAACCTTTTTTTAGGGCTTTTTTAGAAAAAGCTTGATTGTTAAAAGCTAAAATATTTCTCCCTTTTGAAGAGTGTTTATATTTAGGTAGCTTTGGCTCACCTAAAAACTTGCCTGGATTTAACTCGTATTCTTTCTTAGCTTTTTGATAGGATTTAAAGCATTTATCAACTTGCTTAAATACCAATTGAGCAACTTTACTCGGTAAAACTTTATAATCATCACTATTTTTTAGAGAGTGATAAATTTTATTCAACGTTGGTATTGGCTGATTTTTGAAAAAGGCTTGGCGACACAATTTTTGTTATTTAAACTTGATACCAGGAAATGGAGAAGGCATAACTGAAAATCCCACGGCTGTTAAACTATCGCTCTTGCTCAGTTTAACAAAAAGCCGTGGGATTCTTGCTTTATGGGGATTCCTTGCTAAGGCGGCTACAAGTGGTGATGTTGCACCGCATCTCAACAGCAAGAA # Right flank : GAGTTCGTTCAGAACGCTTTGCCCCGCAAGGCTTTCAGCCGCCAAATCGACACACATCTGAAAAAGAATATATATCTTGTGAAAAATTAAGTCAAACACACACCTCAAACCCTTGTCCTGTAAGGCATCGACACACCTCAACGAGAAATATAGGGTTTTGAAGATTTGGCGGGGTGTGTCGATGAACATCTGATACAAAAATTTTACCGATATAGTTGGGTAAATTTTGGTATTTTTGGTAGGATTCTAGCTAGCATCAATTTGATGAAAAAAACCTCTAAAGTGCTTTTTCCATGAAAAGAAGACAAGTTTTTGGCTTTTTGGGTATAGCAATTGCTGGTTTATTGCTAGCAATTATTTTACCACTAGTTACTCCTTCTCGTGTAGTCGCCCAGTCGAACAACATACTTGTGTCAGCCGCTGCTAGCCTCAAAGATGCGCTGGAAGAAATTAAGCCTCTGTACCAACAAAGTAAATCAAATGTGAATATTACTTATAAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCATTAATTCCGATTTCAGGGAATCGGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 14830-15823 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000006.1 Nostoc sp. 2RC NODE_6_length_59037_cov_11.5384, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 14830 37 100.0 35 ..................................... TAGAGCAATATACATGAATAAAACACATTCTGATT 14902 37 100.0 36 ..................................... GGAATTTTCAACATTACTGAGCTGATGGGCTAGCGC 14975 37 100.0 32 ..................................... GAATAATCATCTGGTTCTGGAGGTTCGCCAGA 15044 37 100.0 37 ..................................... GGATAAATAAAACTTGCGACGAATTGATTGATAAAGA 15118 37 100.0 36 ..................................... TAGTAACCGTGGTGGATCACCAGTTATTAATAACTG 15191 37 100.0 34 ..................................... CTTGAATTGCTAAAGCTTGGGCTTGGGGCGTACT 15262 37 100.0 35 ..................................... GCAAATTCAACAACAAGACAAGGATTTATTAGAAA 15334 37 100.0 36 ..................................... TTACAATCGCTTGCTCAAGCTATCATTGCGATCGCA 15407 37 100.0 46 ..................................... TTCATAATTCACGCCACTGCCAAGTCCTACGCGCTTGGCGATAATG 15490 37 100.0 35 ..................................... GGCAAACAGCCTTTGACATCCTGAAATTCCAGTAG 15562 37 100.0 40 ..................................... ACATCTAAATCAAGTGCATTCGCCTGAATTTTATTCTCAT 15639 37 100.0 38 ..................................... TCTCCGCAGGATGCAGAGAGAATAGACACCTTTAGAGA 15714 37 100.0 36 ..................................... ACCTAGCACTTCATAAATCGCTTCTTCTAACTGAAT 15787 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 14 37 100.0 37 ATTGAAATTTCATCTACTCCCTATTAGGGATTGAAAC # Left flank : AATGAATGTTGTTGTGTCTTATGATATTTCTGAAGATAAACGCCGTACTAAAATTCACAAAATTCTCAAGTCCTATGGACAATGGGTACAGTACAGTGTATTTGAATGCCATCTGACAGATACTCAGTACGCAAAATTGCGATCGCGTTTAAACAAGTTAATCAAGCCGGAAACCGATAGTATACTTTTTTACTTTTTGTGTGCCTGCTGTCTCGGTAAAGTTGAACGTATTGGTGGCGAAAAAATTCGTGATGACTCTATTTTCTTTGCTGAGTGCGCGGATGGGTAGATGTTCAAAACCAAATTGCAGTAAGTAACCTTCAAATCCCTCTGCTGCAAGAGTTTCGGGGAAAATAGCTCAGAAAGTACCCGCGCACCTTACACAGACTACGTTCTAGCCATTTTCCTCAAACCCAATGTCCATTTCACATGCTATGATTTCCTCATCCGCGCTACCGAACCTTGAAAACCAAATACAAACAATGTTTCAGGCTACCGCT # Right flank : CACAGATGAAACCTAATGTGCAGAGATACTTAATACATCGCTAATAAAACTGAGCAAACCTCTGCGTACCTTTGCGCTGTCCTCCGCGCCCCTCTGCGTTTAAAACATTGCTCCCATACCTCACTTAACTAAAAATCCCTATAAAAAAGTGAGAGATTACAACTGATTCCTCAATCAAATAGAAATCATCACATTCAATAGTGAAACACCAATATCCAGCATCCAAAATCCGAAGCTGACTATAGTGTTAGGAACTTTTTTTTTAAAGATTTACCTCCTGAAATATCCGAAATTTGTGGTAATTCAGTTCTATTTAATGACTCAACAAAACTCAAACCCAGAGACTTACTAGAAATGCTGTGAGTGTAGCTAGCATTAAGATAACGAATATATTGTGACTTTCCTGCAATATAACTTTGGAAAAAAGGCAAACTTAAAACAGTCATATAACGACGCGCTTGGGAAGCATCGCCAATCATATCAGCAGGTAATGATACTTG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAAATTTCATCTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 1 31057-32338 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000014.1 Nostoc sp. 2RC NODE_14_length_45875_cov_16.129, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 31057 37 100.0 36 ..................................... TTTTAGTACAGGCAGACGACGGCAGGATTTACAAAG 31130 37 100.0 38 ..................................... ACAAATGATGAGTAACCCGTATCAACATAGATACTCTG 31205 37 100.0 37 ..................................... CAAGAAGGAGCCAATACAGTACAGGCTATTGTGCAAG 31279 37 100.0 33 ..................................... GTTTTGCGCTAGATTTAGCAGTATTACTACCGA 31349 37 100.0 34 ..................................... AACTCGGTACGAGCAATAGTTTCAGCACGCTTTG 31420 37 100.0 32 ..................................... ATTGGTTGAGCGCACCAACATATTTATCGACT 31489 37 100.0 36 ..................................... GGATCTAATTCTTCACGCGGATACTCAACGTCTGGA 31562 37 100.0 37 ..................................... TGCGTGGATTTGAAGCAAAAATTTCATATTTATCAGG 31636 37 100.0 36 ..................................... TTGCTCTATCTTTTGTAACAGCTTGCGCTCACCCGC 31709 37 100.0 34 ..................................... GCAGGTGATTGGTGAAGTGCAGTAGTGCCTGTAG 31780 37 100.0 33 ..................................... TGCTTGACCATCTCTTCAACGACTTCCCTAAGC 31850 37 100.0 46 ..................................... AAGAGAGGCTTTTTGGAAGTCTAGCTGTGAAACCAGAGACTTAAAG 31933 37 100.0 40 ..................................... CCCTTAGTTCCACCTCACCATCAAAGGCGAACGCATTGGG 32010 37 100.0 35 ..................................... ATCTTTAGTAACTACAACTAAGTGCAAATGAAGTG 32082 37 100.0 35 ..................................... GGTAGTGGCAGATTCAACACTAATGGACGGCGAGC 32154 37 100.0 39 ..................................... GTACAGACTCAACATTTTGTAAATCCTTAGCAGCTTTGA 32230 37 100.0 35 ..................................... AAAAATAGCCGATTCATTTATTAGGAAAGGTGGAT 32302 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================== ================== 18 37 100.0 36 GTTACAATTTTTCTTAATCCCTATTAGGGATTGAAAC # Left flank : AACTTTTAGCTCGTTTTTTCGTTCCAAAGATGAAGAGATAAGAGGGATGAAGGAGATGAGGGAGTTTTTTGATTGTTATTTGTGAATTTTGTGTTTTGACGAAACAATCAAATTTAATCTAACATGACTTGGCGATCGCAATAAATATTCTGAATTGTTCGCTGCAAACTTTTGTATCGCTTTTCATGCAACTGCATACCCTCAGGTAAAGTTAGATGAGCGCCCATAGTCAAAAGTGAAAAGACCAGCAAACACCACAAAATTTTTATCCAAATGCGCGGATGGGTAGGTGTAGAAAATCAACCTTTGACAAAAATCTCTGTGTTCCTCTCAGCACAAACCTTTCAAGCAAAAGTAAATCAAAATCACCCGCGCATCCTGCCCAGAAAGCATTTCAGCGATTTAGTGTCAATCAATTGAAATTTTCTGGTGATACAATTGACCCATCCGCGCAACTGAACCTTGAAAACCAAATACACATTAGCTTTAAGGCTTTGGCG # Right flank : CTTGAAATTATTAAGTCAACCATGAAAAATAAAGGCGTTGCTGATTGAAAGTATGAATTACTTTCACACATAGTCAATTAAAAATTATTTAAGTAATTGTATATTCACCTTGGGCGAGAGCATCTAACTTCGCTCGGTCTAATACCAAAATTTTTCCGCCTCGATGATAGCGGACGCTCGACTGGATTTGCTTGAACAATCTTACACACTCTTCATAAGTAATTCCAATGCTACGAGCAATTTGATAATATGGTAAACGCGATCGCAACAATTCTCCCTGTTCAGTTACTTCCGTTCCTTCTGTAAGTGCTGAGAACTTCAGGTATTGCGCTAAACGCACAATTGCGCGTTCTGAAACTAATCCATGCACCGTTTGATGTAGATGCTGGAGACGCTCTGTCAAAACTGCAATAATCCGCAAAGCCACTTCTGGAGTATGGTGAATTAGTGCTAGTAAAGCAGTACGCTCCAGCATCAGAATTTTGCAGTTCTGCTGTGCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAATTTTTCTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.64 Confidence: HIGH] # Array family : NA // Array 1 4564-5181 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACKZU010000155.1 Nostoc sp. 2RC NODE_155_length_18333_cov_12.267, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 4564 35 100.0 37 ................................... AGAAAATTAAAACTCTGGTCGTAAAAGTTAACATTAA 4636 35 100.0 38 ................................... TTATCAACGGTAATCTGCCACGAGAAAATTTGGCTTTC 4709 35 100.0 39 ................................... TTCCACACTTGTAACTTCAACTTCTGCATTAGGATTTTC 4783 35 100.0 38 ................................... ATTGTAAGACAAGCGAAAAGAGATTATCGCACCATCAA 4856 35 100.0 38 ................................... AAGTTAACATTTGCGCTTTGGTAGCCTGTAATACCACC 4929 35 100.0 36 ................................... TGTTCCTTCAGGAAGCTCTAAATATTTACCAAAAAG 5000 35 100.0 39 ................................... CAGAGGTTTAAACCTACCTGAACTTGAATGCGGTTAATA 5074 35 100.0 38 ................................... CATGCTGAATCCTCATGAATAATCAGACCGGGCCAAGG 5147 35 97.1 0 ..................................T | ========== ====== ====== ====== =================================== ======================================= ================== 9 35 99.7 38 CTTTTAGCTTCTTCGGAAGTTGAATTAATGGAAAC # Left flank : GGTGAGGCAGCGCGGTCTTGGGGGTTTCCCCCATGAGCGACTGCCGACGCAGAGATTTGTACCTCAGCAGACTAGGAAACGCTATAAGAAAGCCTATCCCAATAAAAAAGTTGAAGGTTTATTCAACGGTAAGCCACTCTAATCAATTAGAATTGATGCGATAATCAATAGAATTAGCCCTCGCAAAACTGCTAGGGCTGTTTGAATGTTGTGAAAAATTGCCAAGCCAAAGAAAGTAGTGATTTTTAAGATGGATGTATCGTCCTTTGACTTGGAAAAAATAGTTCGGATAATGTAAAGAAATGTAAATTTGCGGGGGGTAGGCAATGGCTGAAACCCTTATTCTATCGTTGACCCCCGCAAATCCTTTCTGGGTATGGGTTTGAGGGTTTTTATCTGGTGTTTATTGCGAGTAATTCCTATTTATTGGAGCAATATCTTGACCCCCGCAAAAATAAGGGTGTACAATCCAGTGATGGTAAGCCTTCTATAAGGCTACC # Right flank : TGTAAAAATATTTCTAAAACAAGATACCCAACTTTTTTTAAGTCGGGTATCTTTTTTCAGGAATATAGGACAATACGTTTATTTAAGGTTTATTGGTAAAAAACTGGTTTTTTAGACGCGATTCATCGCGTCTCTACATGAATAATTTTATGCTTAACTGAATTGTATTAGTATATAGGACTTATGCATTAAGCAGATATCATATTATTTTGCAATACAACAGGGTACGATCGCATCTGTACCAGACTGAACTAAATCAACTTGTTTGAGTAGCTCACTCCAAGCCGATGCAATTTTTGGATCTTTGTCTTTGGTATTTTGTAAATTTTCTCCTAAAGTTGTTAAAGCATCATACCAAAGACCATGTTTTGCAAAAAAACTAGCTTTTTCCAATGGGGTTTTAGCGGCTGCAAGTTGTTGTGATGATGCATTGAGAGTCACTTGTGTGATTGAACCTTGGACGTAAACAGCAGCAGATGGTTTGTCAGGATCGCAATAAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTTAGCTTCTTCGGAAGTTGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.10,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA //