Array 1 4402-4714 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWK01000325.1 Corallococcus aberystwythensis strain AB050A NODE_325_9923_cov_19.2223_ID_12089, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================== ================== 4402 30 100.0 39 .............................. GGACCGTGGCAGGGGAGGGGCCTCGCCGGCCGGGCCGCG 4471 30 93.3 42 .........................C..A. AGAGCGCCATCGCTTGGAGGCCGCTGCTTCATCCAGGTGGCG 4543 30 93.3 40 GC............................ GGGACCGTGGCAGGGGAGGGGCCTCGCCGGCCGGGCCGCG 4613 30 100.0 42 .............................. ATGGACCGCGCCCGGCGGGAGGGCTACTCCGGCCAAGCCTTT 4685 30 96.7 0 ..............T............... | ========== ====== ====== ====== ============================== ========================================== ================== 5 30 96.7 41 CGAACTGGTCCGACAGTCGGACCAGTTGGG # Left flank : GGCGGCCGGGGTCGCCCCGAAGCGCGCGGTGCCGGTGCGGACGCCGGACCCCTCGCCGCCCCACGCCACGGTGGTTCCGCCCGCCCCCGGGGACGTGCCACCGGAGCCGGAGGTGGCCAACGCGCCGCCGCAGCCGAACGACCCCATTGCCGAGGAACAGCCCCAGACGGCGCGCTGGAAGCTGGAGAAGACGGAGCACATCGCCACGCTGCTGGGGCGCGACGTGTCGCGGCTGGAAGGGGAGCGCCAGGAGGCGCGGGCGCGAGGGGACAAGGTCCGCGTCGAACAGGTGGACGCGCTGCTCCAGCGCCACCGCGTCCGGCTGGACGAACTGCACGAAGAGGCCCGCACCCTGGCCGAGGCCGCCCGGAACGAACCGCCGGAGCCTTGAGGACTCGGGCTTCTTCTTCCGCCCGGTCCCGGGTTTCCGGATACGAAATCGGTCCACCTGAATGAGAAGGTGAGAACGCGTAAGGGCTCGCCGTCAGCGGCGCGGCGTA # Right flank : GATGGACCGCGCCCGGCGGGAGGCGAGCCGCGCTTCCGGACCTCGGCGGAGGCGTTGCCCGCCCGCCTGGCCTCCAGACGGCTTGCCGTCCCCTCTTCACGGAAGGCACCCACCGCTTCGCGCTGGGAGTACGAGCGCTTCTGCCGTGTACTGCCGCGTCTTCACACGGGCGTGACAGGTCCGGGACAGCGTGCGCATAGAAAAGGACGTGTCTGTTTCCACCGCGACTGCCTCCACCGGGCCTTCCCTTCCCAGCTCCACCCGAGGCTCCCGGCTGGCATCCATCGCGGTGGCCAGCGCGTTGTTCATGGAGTTCCTGGACTCCACGGCGCTGTCCACGGCGCTGCCCACGCTGTCCGTGGCGTTCGGGACGGACCCCGTCCACCTCAAGCTCGCGCTGACGTCGTACATCCTGGCGCTGGCGGTGCTCGCGCCCGCGAGCGGGTGGATCGCCGACCGCTTCGGTCCGCGCCGCGTCTTCATGACCGCCATGGTCGTGT # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGAACTGGTCCGACAGTCGGACCAGTTGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-12.50,-12.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [2-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [35.0-20.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 18350-17981 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWK01000077.1 Corallococcus aberystwythensis strain AB050A NODE_77_35368_cov_19.1919_ID_11593, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ============================================== ================== 18349 24 100.0 45 ........................ GGAACGGTGGCGGGGGAAGGGCTGCTCCACCCGAAGCGCGCGAAT 18280 24 100.0 44 ........................ GGAACGGCGGCAGGGAAGGGCTGTTCCAGCCGGGGCGCGGGAAC 18212 24 100.0 45 ........................ AGGACCGAGGCTGGGGCGCTGCCGCTCCAGCCAAGCCGCCGAAAG 18143 24 100.0 45 ........................ GAGAACGCGGCTGGGGGCGGGCTGCTCCAGCCAGGCTGCGGGAAC 18074 24 83.3 46 C......G..A.......G..... GAGCGCGGTGGCTGGATGGCTGCCCTTCCATCTGGGCAGCGGAGAC 18004 24 79.2 0 CT.......G.....G..G..... | ========== ====== ====== ====== ======================== ============================================== ================== 6 24 93.8 45 TGGTCCGACAGTCGGACCAGTTGG # Left flank : CGCAGCACGGCGTACTGGCTGGGCTTCAACGCCGCATCGGAAGAGGTGACGCGGAGGTTCCCCAACCAGTCGCTCTTCCTGCGCTACGAGGACTTCATCGCCGCGCCGGATCGCGCCGTGGACACGGTGCTGGACCTGGTGGGCGTGCCGCGCGCACAGAACCCGGTGAAGGGCCGCACGGTGGTGTTGGGGAAGAACCACACCGTCACCGGCAACCCGGACCGTTTCCGCAGCGGCCCCACGCTCCTGCGCGGCGAGGACGACGCATGGAAGGGGGAGCTGGCGTCCGGGGCGAAGGCGCTCACCGTGGCGCTCGCGTGGCCGCTGATGGCGAAGTACGGGTACTTCAGAGGCGCACGGCAGGCTCCCACCGGAGGTGCGGCGCCGGACGCGGCGGGCATGGGAACCCGTCCCTGAACCTGCGGACATGAACTCCGTCCCCGGTGTTGAGAAGGTGAGAACCCGATGGCGGCTCCCCGGCGGCGGCGAAGCGCACGAAC # Right flank : GACCTTGATGCGTGGTGCGGTGGGCTTACTCGGGCGCGGCTGGCGCCGGCTTCTGGAGGGACGCGGATGGAACTGGGACTCGCCAACAAGGTCGCGCTCGTCGCTGGAGGCTCCAGCGGGCTGGGGCTCGCCGTCGCGGAGGAACTGGCGAAGGAGGGCGCGCATGTCGCCATCGGCGCGCGGGACACGGACCGGCTGGCCCAGGCCGAAGCTCGGCTCAAGTCCGTGGCTCGCGGTGGCCGTGTGCTGGCCACCCGCGTGGACGTGAAGGACGACGCGGACGTGCGCCGCTGGGTGGATGACGTCGCCGCGAAGCTGGGCGCGCTGCACGTCGTCGTCACCAACAGCGGCGGCCCACCTCCAGGCCCGGCCTCCACCTTCGGCGTGGATGCGTACCGGAGCGCGGCGGATGCGGTGTTGCTGCCGCCCATCTCCCTCGCTCTCGCGGCGCTGCCACACCTCAAGAAGGCCGGGTGGGGACGGCTGCTGTTCATCACCTC # Questionable array : NO Score: 2.75 # Score Detail : 1:0, 2:0, 3:0, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGGTCCGACAGTCGGACCAGTTGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA // Array 1 224-460 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWK01000085.1 Corallococcus aberystwythensis strain AB050A NODE_85_34010_cov_23.4915_ID_11609, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ========================================== ================== 224 28 100.0 42 ............................ GCCGTTGGCCGGGGGGAGGGGAGGTCCCCTGGCCGTGGTCCT 294 28 100.0 41 ............................ CGCGCGGTGCTCCGCCGACAAGGGCCCTCGGCCGTGGTCTT 363 28 100.0 42 ............................ GCTGTTGGCCGGGGGAGAGCGAAGGTCCCCGGCCATCGCCGT 433 28 96.4 0 ..........................G. | ========== ====== ====== ====== ============================ ========================================== ================== 4 28 99.1 42 CCCAACTGGTCCGACAGTCGGACCAGTT # Left flank : TTGACGAGATGACCGAACTGCAGCACGCGCTGCGCTCGGGGCTTGGCTACTACCGCGCCCGGCCCCAAGCGGTGCTCAGTCTCCTCGGCTCTCCCTGGAACCCGACTCAATCAGTCGAGGCGTGAATGAGGGGCCCCTCGTCAAAGTGTGACCGCAGGGTCTGACATGAGCGCGAGACGCGCTGAGCCCAGACACCCCTGCTGCCCCCGCCCGCCTGATGCGCC # Right flank : TCGAGCGGCGCGCTTCCGGCGGGGAGGCCTCGCAGCGGTCTTACCTGCTCAGCCATGAAGACTGCGCCTGGGTCCAGGGGGCCCGGTTCGCCTGGGGGAGCCCGTCAGCGTGTGTTCGTGGGCCTGCGGAGCAGAGGGAACAACTTGAGGCCCTTGCTGGCGGAGATGTGCCAGGCAAAGGGCCCCATGGATGCACCCTGTGATGGTGTCAGGCTCTTCCGGCTGGTGATGCTCAGGAAAGGGTCCTTCACCCTCGCGTGGCGGCTACCAGGTGAGGCCGACGGTGGCGGATGCGCGGCGGCGCTCGCCGTAGAAGCAGGCCGCCGCGGAGCTGCACGAGGACACGTAGGTCTTGTCCCCCAGGTTGGAGGCGTTGATGGCCGCTCGCCACGGGCCGTGCTCGTAGTGCACGCTCGCGTCCACCAGCGTGAAGCCCGGGACCTCCAGCGTGTTCTCGCGATCCGAGTAGGAACTGCCCACGCCGCGCACGCCCGCCGCCA # Questionable array : NO Score: 2.61 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCAACTGGTCCGACAGTCGGACCAGTT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.80,-7.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 16727-17036 **** Predicted by CRISPRDetect 2.4 *** >NZ_RAWK01000178.1 Corallococcus aberystwythensis strain AB050A NODE_178_21164_cov_23.7557_ID_11795, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================ ================== 16727 26 100.0 44 .......................... AGGGGCCATTGCGCCCGGGGGCCCTGCCGTCGGCGCACCGTGCG 16797 26 100.0 42 .......................... AGGGGCCATTGCGCCCGGGGCCCCGCCGTCGGCGTACGCGCG 16865 26 100.0 46 .......................... GGACCATCGTGGCTGGGGAGGGCTCCGGTCGTCGGCGCACCGTGCG 16937 26 100.0 48 .......................... GGCCATCATCGTGGCTGGGAGGGCGCCTGCTGCATCCCGGACAGCGGA 17011 26 100.0 0 .......................... | ========== ====== ====== ====== ========================== ================================================ ================== 5 26 100.0 45 AACTGGTCCGACAGTCGGACCAGTTG # Left flank : CGAAGTCCCAGTCGAAGCCCACGGCGCGCAGCTCGTGCGCGAGCAGCCGGCCCACGCGCTCGGCCAGGGCTTCGTCGCCGCGCTGACCCAGCTCGCGCATGGGCGGCAGGGACGTGAAGGGCTCGCCGCGAAGGCGCGCCACCCGGCCGCCCTCCTGGTCCACGGAGAGGATGAAGGGCCGGCCCGCGCGCGTCTTGATGTCACGGCAAAGGGCCGCGGTCTCCGCCGCGGTGCCCACGTTGCGCTTGAAGAGGATGGCGCCGTAGATGCCGTCGTCCATCAGCGCCGCGAGGTCGGCGTCGATGCGGGTGCCAGGAAAGCCCACCATGAAGAGGCGGGCGCAGTCGCGGTAGAGGGCGGAAGCAGGGCTCACGGCCGCGCAGTGTGGCAGAGCCCGCCATCCCTGGGGCACTCCGCGCGCATCCCGAGCGTCGGCTGCCTGTCAGGGCATGGAGCAGCCGGCTCCCGCAGTGGCCTCTCCGTCCGAGGCGCACAGCACG # Right flank : GGGCCGCATCGGGCGGGAGGAGGACACCTTGGATGCCTGGGCGCTGGGGGCGTGACGGTACGCGTCGAAGAAGAACGCCCGGTGCGCCGCCGGGGCCCCCGCCGTCCACCTTCGTGGGGGCGGGCCGGGGCTACTTCCGGAGCAGCGTGCCTTCGAAGAAGAACGCCAGGCACGCGGCCAGGATGAGCCACGTCCACAGCGGCACGGCGGGCTTGTCCGCGTCCCCCGTGGAGGCCTTCACCGTGTCCTCGCCGAAGTAGGCCGTCAGCGTGTCCTGCGGCACGCGCGTCAGGTCGCTCTCCGCCGGGTCCAGCGTGGCGGCGAAGTCCAGCGCGGCCACGGGCTTCCCCTCCGCGCCCAGCACCGAGTGCACGCCGGGCTCCACCGTGGGCCCCGCCACGAACGACCCGTCCGGCTGCGCCTTCACCGGGACCTCGCTGCCGTCCGGCGCGCGCACGCCCGCCACCTTCTGCGTGCCCTCCGGGCGCAGCGTCACGGTC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACTGGTCCGACAGTCGGACCAGTTG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.60,-7.80] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [28.3-26.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //