Array 1 177922-179804 **** Predicted by CRISPRDetect 2.4 *** >NZ_LJPL01000001.1 Streptococcus pasteurianus strain AL101002 contig_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 177922 36 100.0 30 .................................... AGAATGTGACTATCTTGTTCTAGATGATTT 177988 36 100.0 30 .................................... TTGTTTTTGGGTTTGATTTTGCTTTTACCG 178054 36 100.0 30 .................................... TCCTTAAATCGTTTGACTTGTGAGACAGAC 178120 36 100.0 30 .................................... TGGAATAGAGGTGTTAACACACTTCTTCTC 178186 36 100.0 30 .................................... TATTTAAGCCCATACGCTCCGCATTCCTTG 178252 36 100.0 30 .................................... TAGCAACGCCAATCAAAAGCATAGATATTA 178318 36 100.0 30 .................................... TAGCACTTGCTTCTGTTTGCTTACCATTTA 178384 36 100.0 30 .................................... GATTTAGGCGTGTTGTCCGCTTGTTGACCT 178450 36 100.0 30 .................................... CTACCTTATAGTACGTCGCATTTTGCCACA 178516 36 100.0 30 .................................... GAGCAAGTGGAAAGGCGACCAAGGATTGCC 178582 36 100.0 30 .................................... TCTCCTTTGTTTTACTTTATACATATATTA 178648 36 100.0 30 .................................... GATGACTTTGATTGATGAACAGCTAGCTAA 178714 36 94.4 30 .........T.......G.................. TGGCGATACGAGATTTGATTCTACCTGTGA 178780 36 100.0 30 .................................... GCGGGAACTCTCTTTCTGTGTTGCTGATAG 178846 36 100.0 30 .................................... ATAGGGCGGTTACATTACCATCTCCAGATT 178912 36 100.0 30 .................................... TAGCACTTGCTTCTGTTTGCTTACCATTTA 178978 36 100.0 30 .................................... GATTTAGGCGTGTTGTCCGCTTGTTGACCT 179044 36 100.0 30 .................................... CTACCTTATAGTACGTCGCATTTTGCCACA 179110 36 100.0 30 .................................... GAGCAAGTGGAAAGGCGACCAAGGATTGCC 179176 36 100.0 30 .................................... TCTCCTTTGTTTTACTTTATACATATATTA 179242 36 100.0 30 .................................... GATGACTTTGATTGATGAACAGCTAGCTAA 179308 36 94.4 30 .........T.......G.................. TGGCGATACGAGATTTGATTCTACCTGTGA 179374 36 100.0 30 .................................... GCGGGAACTCTCTTTCTGTGTTGCTGATAG 179440 36 100.0 30 .................................... ATAGGGCGGTTACATTACCATCTCCAGATT 179506 36 100.0 30 .................................... TTGGTTAACTCGTGCTTGTACGGCATCGTA 179572 36 100.0 29 .................................... CCGTTAGTGTATACTTGTACGGTTCGCGT 179637 36 100.0 30 .................................... TAATAGAAAGGAGGTAGAATAATGAAACTA 179703 36 100.0 30 .................................... CAAAAATATTTGTAGAAAACTATTGACATT 179769 36 83.3 0 ............................TT.TGT.T | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : GGATGACTATCTTGATTATTCTTCTTTCATAACTATTTGTAAGACTATTACGCAAATGACTGAGAAATTTCCTAATTTTTATTGCACAATTTTCCCGTCAAATGAAAGTTATTTATACGTTACTAAAGAAACAATTGAACATGTTACCATTGTTTCAGACTTTATTGAATCATTGTTTGACTTGGATTTTATGTATGAAAGATTTATTGGTAGATACCCATCAAATAATATTCCAAGTAAAAGTGAGTTTTTGATATTACTTCAGAAAAATGCAAGTTATCTGTTTAGTGATCAGATTTCATATATTAGTTTAGGAATTCCAGATATGGTAGCCATCAAGATTTTAAATAGTTTATACCATTATGATAAGTCTGTTGTATATCCAATACCTAAGATAGAACCGATAGAAATAAGCTTTTTAAAGGACAGAGATTGACTTTTTTGCCTAATCAAACTATAATCGATTTGTAGGATACAAAAACTAAAAATGACGATTTGAG # Right flank : TTTATTATTTAAAATCGGTTGAAAGGGATTTTATGACTTCAAAAATTTTCTTTGGTGAGTGGATGAGGATGAAAAAATTGATAGCGCTTTTATCGATTTTACAGGAATCTCTGGTGTTATTGTGAATATGAAAGTACTCCTGATAGCATCAAATTAATTATTTTCACTGTTCAATAAGGTAATGGAGCAGGTTTATACTTATCAATTTCGCCCCATTTTTGAATAGTAAATTTGCTGACAATTATGAGTTAAACGGGTATAACATTAAACAATTGATTCTTGATGCGTATGCCAAAAAAGATATTAAGCACTGAGGGCGCTCAGGATGCTTTTAGACGAAATTATTTTATAATATTTAACCTTTTTACCATCTTATGATGCTTTTTTTCTTGAAATGACTTCTAAAACTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAATAATGATTAATTGTATAGGATTGTAAGATGGATATTCAAGAATTAAAAAAACG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //