Array 1 485920-485539 **** Predicted by CRISPRDetect 2.4 *** >NZ_JANI01000077.1 Bacteroides sp. UW isolate 1 504, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ==================================== ================== 485919 35 100.0 36 ................................... CCCCGATGCGTTGTGCGGCATGAAAAATTTTTATCA 485848 35 100.0 34 ................................... CCAAGCCATAACACCTTCAAGGGTTACTTTAACA 485779 35 100.0 33 ................................... GTTCTTGGTTACATAGGTAATGGTGTCATTGGT 485711 35 100.0 33 ................................... TTCCGGAGCTTCATTCCAATATAGCTCCTTACA 485643 35 100.0 35 ................................... GAAGGCAATTGCTTTTTTTGCCAGCCAATTGTAGA 485573 35 85.7 0 ...........................C.A.C.GT | ========== ====== ====== ====== =================================== ==================================== ================== 6 35 97.6 34 ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Left flank : CATAGGCATCTTGAAGATTCCCCGCATTCACTCGAAATAGTTTTTTTCTAAATTCTTTTGCGAAAAAAAGAAAAAACTTAGTCATCTGATAATATGAAGATTATTCTATATTAAGAAAAAATAAGTGTAAAAAGAGATGCGCAAATAATAGCTTTTACGTATATTAGCAAATCATTTGCGAAAAAAGGATTGATATGTTATGCGCTCTTTGAAATATTGTTCTATATATCAGCAACTTACGCAACATAGTTTTAGGGTTGTTTTCGAAACTCGCCCACCCCTAAATATCCAACGATTATTTGCGAAAAATGAAGTTTACACAGCATTCTAATTATCAATCATTTAGGTCAAAAAATCACTATTTACACATCAGAATTACAGAAAAAAAGACCTACTTTTGCGAAAAAAGACTTAGATTCGCATCTACTATTCTGGTTTACAACCTATTATGATCACAGACAAATACATTTAAGAATATATAATAGTCTAATAATCAGAGT # Right flank : TGGTTCTTCTTCAAATTTGGTGGTAAGCTTTCTTCTACTCATGAATCTAATTCAGTTTTCGGAAGTGTAAGCTCTCGTTTATAGTTGACAAGAAAGCAAGTATCCCGGCTTTCGCCCGAAAAGCCCATTCGTGAGGCGGAGAAGCGAATTTTAGACTAAACCATCTGAAAATCAACATCTTTAAAAAGTAAGATTTCTATCCTCAAAAGCTTTGTTTTAACACAGAGTTAAAGCTTATTCTTTGGATGTAAATAACAAGTTCTTTAAATGCATAAGACTTGTTATTTGCGCACAAGAACCTGACAACCTGAAAAAGGCGTTAACAATGTTAATTGAAGAAAGGTATAAGGATGAAGATACCGGTTCAGACGGTGTAGATTCACTTCCGAAACTTGAGTTATCTGATTCAGCCAGTGTCTGTTTTTTCTTATTAAAGCGTAAGCATTCGGCCTCGTGCGTGTTTCTCTCCAAGTTATAATAAAGTCAAAAGCCAGACGTAT # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTAGATCTATTCCAGTATAATAAGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:71.43%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.60,-1.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [66.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 21619-23249 **** Predicted by CRISPRDetect 2.4 *** >NZ_JANI01000010.1 Bacteroides sp. UW isolate 1 437, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 21619 29 100.0 34 ............................. AATTATGCTGCTTCTGGTTCTGCTTCAATTAGTT 21682 29 100.0 33 ............................. ATTGATATGCGACCTTTTAGGTTTAACAATTGT 21744 29 100.0 35 ............................. CAAGTCCTTGCAAAGTTCGGATTCATTGATGAGGT 21808 29 100.0 35 ............................. ACTTTTATGGCTGGTATTCGTGCAGGTGGTATTTC 21872 29 100.0 38 ............................. TTACGTAGTGCTTTTGGTAAGCCTCTTATTGTTAATTC 21939 29 100.0 35 ............................. CCAACAGCATGATTTACAAAACGAGAACGATAACC 22003 29 100.0 34 ............................. AAATAAAAATTCTTAACTTCCATAACTAAACAGG 22066 29 100.0 36 ............................. AGAGTAGAAAGAGCTATCTGTTTTTCCTGTGGCAAA 22131 29 100.0 37 ............................. AATATCGACGAATCAAAAAATACAAACGCTTAGAAAA 22197 29 100.0 34 ............................. CTTTAAAAAAAGTGATTCTTTTGATTCACGATAT 22260 29 100.0 35 ............................. TTCTTTGTATTATGCACCTGAGGAACTTCGGTTGA 22324 29 100.0 35 ............................. ACTTTCATGTTATTGATCGTTTTACTGATCGGTTT 22388 29 100.0 35 ............................. ACGTAGAGGTCGTTAATTGTCTTTAGTTTTTACTC 22452 29 100.0 35 ............................. GCTTATTTATTATAAGAAAAGACGCTTTATTCATG 22516 29 100.0 34 ............................. ATGCAAGCACATCGTTCGACCCGTATTTGTGGTT 22579 29 100.0 37 ............................. ACGAGCTTTAACAGGGTCTTGGGACCAACGATCCATC 22645 29 100.0 35 ............................. TACGAAAACAAATTACTCATTTTTCATCAAATTTA 22709 29 100.0 34 ............................. TACGAAAATAAACTACTCATTTTTCATCAAATTT 22772 29 100.0 35 ............................. TATTAAACAGGTTTTTTGTCAACCTCTGCAATCAA 22836 29 100.0 34 ............................. AATCGCCAGCTCTTAGAAACAAACTGTCTAAAAC 22899 29 100.0 37 ............................. ACTTAATAAGTCTAAGTATGCGTCTGTGGTTGATGAT 22965 29 100.0 36 ............................. GATAGAATCATAAAGGTTAAAAAAGATTTACTCATT 23030 29 100.0 35 ............................. CTGTCGGAGTGATGAAGTGGAACGGTAGCTCAATA 23094 29 100.0 34 ............................. AGTAACGTTCCTGAGAGATGAACTTAAACTTGAT 23157 29 100.0 35 ............................. CTGAGAAAAAAGCAAAATAAAGATAAAATGACAGG 23221 29 86.2 0 ..A......................G.CT | ========== ====== ====== ====== ============================= ====================================== ================== 26 29 99.5 35 GTGTTAATTGTACCTTATGGAATTGAAAC # Left flank : CCGTTTAAAATGTATTGGTAAATATGTATGTTATTTTAGTTTATGATTTTGGTGAAAGGAGAGTTTCTAAGATGTTGAGATTATGTCGTCGGTATTTGAATTGGATCCAGAATTCTGTGTTTGAAGGTGAACTCTCGGAAGTACGTTTAAAAGAGCTATTATTATTGGCAAAAGGGTTTATGAATCCCGAAGAAGATTGTATTATCATTTTTAAAGGGGCTACTCAATGCTCTTTGGAGAAGGAAATAGTGGGTAAAGAACTTTCTAACATCGATAATTTTTTGTGAAACGGTTGTCGAAGTGGATCGTTATTGTGAATTATTCAATGATAATGCAACCGAAACGCTCTATGACGTGTTGATACATAGATGTTTAGCGCCTATGTCGCTAACCCATGTTTTTTATATTATTCTTGATCGACGCATTATTTCTAAATAAAAGTATTTTTTCTAAAAAGTATTTGTCTTATTACTAAGTGATTGCGTTGGTTGATGGACAGA # Right flank : TAAGGAAGATGTATATTTATAAGATTGGCTTAATAGAATGAATTTTTTTTTCTTGCTAGCATATTCTCTCATTATCTTTTGGGAAATGTTTTTATTAATTCTATTTCCTTTTTATTAGAAAACAATCCTTATATTTGTCCCTTGTATTATTAATTTAATGACAAATGACACTTATGAAGACATTGAATTTTATGAAGACGCTGCTTTTATTGGTAGCTATAGTAGGCTTGAGCTCTTGTGGCGACAAGTATTATTCAGATGATTATTTGCGAAACAGTAATGCAAAGTTATGCGGAAAGACTTGGGTGAATGATTCTGATAAAAATGATGCGGATGAATGGGTGCGCCATACATTGAAGTTTGATGATAGCGGACGGCTGGCAGAAACTTATGCCTATTATCATTTGAATGAAAACCAACCTTACCGGACAGAAACAAATAATCTGACTTGGTCCTGGATAGACGATTCGATGGAAGGAATTGTTTTTGACTATGGCGTA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTAATTGTACCTTATGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.90,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //