Array 1 2134139-2130938 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP008802.1 Actinotignum schaalii strain CCUG 27420 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2134138 29 100.0 32 ............................. AAGCCCGCGAACACACAGCCAGTAACCCCGAC 2134077 29 100.0 32 ............................. GGTTAAGCGGATTTTGCGCCCGCAGCGGGCGC 2134016 29 100.0 32 ............................. GGCATGCTCGAAACCTACACGACTTTGCTCGG 2133955 29 100.0 32 ............................. AACGGCGGTCTTTTTCGGTAGCGCGCCGTCTA 2133894 29 96.6 32 ............................A AATTGCCTTCACATCCGAGGCGGTGCCAGGCC 2133833 29 100.0 32 ............................. CTCTTGAAGTCGTTCGGCGTCGCCGGTAAGTG 2133772 29 100.0 32 ............................. CATTAAGCGGCTACCGGATAAGCACACCGTAC 2133711 29 100.0 32 ............................. CTCTTGAAGTCGTTCGGCGTCGCCGGTAAGTG 2133650 29 100.0 32 ............................. CATTAAGCGGCTACCGGATAAGCACACCGTAC 2133589 29 100.0 32 ............................. TCTTCGGTGTAATAGGTCAAGGATTCTAAGAA 2133528 29 100.0 32 ............................. GATGCCTTTACGTTCTGAATTGCGGGAGTTCG 2133467 29 100.0 32 ............................. AAGGTACTTAAAGACTTGCCGACTGTGCACGT 2133406 29 100.0 32 ............................. CTAGGTAGGGTCCCTTGGGGTTGAGGCAGATA 2133345 29 100.0 32 ............................. GAGCGCGCGCATGTCCTCGGTGTCTGCGCCGC 2133284 29 96.6 32 ............................T ACGCACAGGGCGCTTCACCTCCCCGCACCTGG 2133223 29 100.0 32 ............................. GGTTTCTTTCGATTGCGTTAGCAGGTTGAGGA 2133162 29 100.0 32 ............................. GCGAAGCAGCAGAAACCACTGGAGCCGTAGAA 2133101 29 100.0 32 ............................. TTCAATAGCTGCCGAGGAGTAACCCGCGAAAA 2133040 29 100.0 32 ............................. ATCCAGGACTTAAGTCAGGATATCTACGGGCC 2132979 29 100.0 32 ............................. GTTAATTTCCAGTCCTACGCGCGGCCCGTAAA 2132918 29 100.0 32 ............................. ATCTCATCAATACTCACGAGGTTATTGTGGTC 2132857 29 100.0 32 ............................. GGGGCGGGCGCGCCTTATATCGATTCCACCGC 2132796 29 100.0 32 ............................. GCCTTCAAAGATTCAATGCTATTAACCTTCGC 2132735 29 100.0 32 ............................. TTCACTATCGCGTCCACGCCGCGCCGTAAGGG 2132674 29 100.0 32 ............................. CTCGGCCGGCGTATCGCTTTGGATCAGCATCC 2132613 29 100.0 32 ............................. AGAAAAGTATCTTCACAAGCTTTATGAGGTGA 2132552 29 100.0 32 ............................. GTACGTTTGGCGGCACTCGACCGCGGCTCCAT 2132491 29 100.0 32 ............................. ACATATCCAGCGGCAACCGCGCGGGCCTGTTC 2132430 29 100.0 32 ............................. GGGGGTGTGTTCGCGGCCGGCTTCGTAGTAGA 2132369 29 100.0 32 ............................. TCGTTGATGCCGGGCGTGCAGCGGGTGATAAC 2132308 29 100.0 32 ............................. CGCCTTGAAGATCTCGAGATCATCACCTACGC 2132247 29 100.0 32 ............................. CGGAGGCTGTAGAGCCTGAACCGGAGACGGCT 2132186 29 100.0 32 ............................. GCCGCCGTTACCGATAGGGTGCCTTGCTTGGA 2132125 29 100.0 32 ............................. CGGAAGTAGTCGTTTTAGTCTCATGGCGTGGG 2132064 29 100.0 32 ............................. GGGTCGTTGTTTGCGGGTAAGCAGACCGTGGC 2132003 29 100.0 32 ............................. TAAAAGCCACCGTCTACACGGTGACCCGCTGG 2131942 29 100.0 33 ............................. CCCGCGAGGGCAGAGCTAGCGAGCTCGTGGATT 2131880 29 100.0 32 ............................. TGTTACTCAGAGCGGTAGCCGCGTAGGTAAGG 2131819 29 100.0 32 ............................. GAGGGTTTCACCCTTAGCAAGCGAGGCACACG 2131758 29 100.0 32 ............................. GTGGAGCATGAGCAAAAGGCCCGCATCGGCAA 2131697 29 100.0 32 ............................. CTGTTTCTCAGCGATAAGCGCGGTGAACCGAG 2131636 29 100.0 32 ............................. GCCGTTATCTTGTTTGAGGGCTTGCAAGAGGG 2131575 29 100.0 32 ............................. GGATTGCGCGCAAGTCTTTCGATTGAGATCGA 2131514 29 100.0 32 ............................. ACATATCCAGCGGCAACCGCGCGGGCCTGTTC 2131453 29 100.0 32 ............................. AATCACACTAGCGTATTTTCCGGCGTAAAATA 2131392 29 100.0 32 ............................. AGTGTTCGCCCGTCCCTTTCATCCCCGTGACC 2131331 29 100.0 32 ............................. TAGGCGGTGAGTTGCAAGGCTTGCCACTGATT G [2131309] 2131269 29 100.0 32 ............................. AGTTAGCCGTAAGTGGCGCGGGCTTCAAGCGT 2131208 29 100.0 32 ............................. TGAGGATGTGCAGCCGCTCCACGTGGATGGCA 2131147 29 96.6 32 ............................T GATGGTTGTTCTTGAGGAGATTTGGGGGCGTA 2131086 29 93.1 32 ..C........A................. TGGGTTGCATAGATCGGGGTGATGCCATAGGA 2131025 28 89.7 32 ..C..........G.......-....... GAGGGATACTTCAAAGAGCTGCGCGCTCCGGC 2130965 28 93.1 0 ......................C...-.. | ========== ====== ====== ====== ============================= ================================= ================== 53 29 99.4 32 CTGTTCCCCGCGCAAGCGGGGGTAATTCC # Left flank : GAGTGCGGGACAATTTGTGGGAACGCGCGGTGTCCGCCGCGGGTACCGGCAGCCTCACTCTTATTTATAACGACGCCGCCCGTGAGCAAGGCTTCGCTCTGCGCAGCACGGGAACCGGCAGTCGCCCAGTCCTTGATCTGGACGGCATGCTGGTTATCGGGATGGGTGCGGAGGATGCAGTTGGTAAGGAAGCGGATGATGTAGATCTGCCAGGTGCTTCGCTCAGCTCTCCTGATTCGGTTAGCACTGCGCCGATTCATCGCGAACGGAGGAACCGGGTTCGCAAGCGCACGGTCACTATAGCCAAACGGGATGATCGGGAGCACGAGCCTGTGTCCGATAAAGATAAGCATAACGGAATAAGCTAAATTTGATGGGTGGGAACTGACGTGGTTGCTGCGCCCAGCGCACCGGCGTACCTCCCGGAGATCCGCAAATCTGGAACTCTGTTCCATTGCGATTTCCGGGTCCGCCGCCGATAAACAACCAGGTCAGGCAGT # Right flank : TATGGCTCCTGCCAAAGTTCGGCGAATCACCAATAGGGGTGCTCCCCCATACCGTCACCACCGCGCTTCGCGATGTCACTACGAAACTGACCGACCCAACTAACCATTTCCGTGTTTTTCGGAGAAGAGATAAGCCGAGACGACAGCTCTCGCTAACACCTCACTTGCCTTTTCCAGTCTCGCGATCTCGGCGTCTTTAGCCGCTAGTTCTTTCTCGCGCCGCTGTTCTAAACGTTTCATTTTAGCTTCGGCGTTGTCTACTCTTCGATGCAGACGTTGTTTTTCGCGCTTATCACGGCTACCCATGATCCCAGTCTTACGTGGGGAACCCCTAATCTCCAAGTCCCACCAACGTGACGGAAATCCAACAACGAATCCGATACCCAACTCACCCAGGACTACTGGCGCGAGGGTCTTTCTGGCCGTCACTCACAATTTCTGATGTGGGTGGCCTGCCTGACACGCAAAAAAGGCCGACGCAGCTTTCAGGAGTTCATTGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCGCAAGCGGGGGTAATTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [43.3-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //