Array 1 500-111 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QECY01000056.1 Vibrio cholerae strain BD58 BD58_S58_L001_R1_001contig_56_consensus, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
       499	    28	 100.0	    33	............................	CAACAAAAAAGCCCTCAATCGAGGGCTTAGCGT	
       438	    28	 100.0	    32	............................	AAACGAAGGTAAGCGCGGACCACAAGCTCGAA 	
       378	    28	 100.0	    32	............................	GTATCAATATGGCGCGAGAGATTTGAGTCACC 	
       318	    28	 100.0	    32	............................	TATATTAACAACCAGCTAATTTTCTCGGATAT 	
       258	    28	 100.0	    32	............................	CTCAGTTTTTGCGCCAAGCAGGTAAGGAACAA 	
       198	    28	 100.0	    32	............................	AAACTTGGCAACACGAAAAGAATTAAAAAAAC 	
       138	    28	  96.4	     0	........................A...	|                                	
==========	======	======	======	============================	=================================	==================
         7	    28	  99.5	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                 	       

# Left flank :   ATGCTTTTACTAATGTTACAAAGCATCAAAAGGTTATAGGATTAACGTCTTCAGTAAAACTAGTTGATTGGGATAACGGTATTTTAAACGTGACCTTAAAGGGCTTTAACCGTAACTCAAGTATTTCTTTTTTACCCACAAGGTTAAATATGTTCCTAGAAAATGACTATCAAGCCTTGGGCGTACTGTATCTAAAAATAGGTCAAGCAATTAATCGTGAGACAGAGAGCTAACAAACGCCTCAAGAGGGACTGTCAACGCGCGGCGTTTCCAGTCCCATTGAGCCGCGGTGGTGAAGGTTGTTGTGTTTGAGTTTAGTGGTAATGCGTTGTCAGCCCCTTAGGCGGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAGTTTTAAGTTATTGATTTATATTGATAATAAATCTAGTAAAAAATAAAAAGTTATTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAAGTTTCATA
# Right flank :  ATATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGCCAACGCGTGGCGTTTCCAGTCCCAATGAGCCGTGGTGGTTTCGGTTGTTGTGT

# Questionable array : NO	 Score: 6.23
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [5,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-7.70,-8.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [56.7-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.92   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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