Array 1 96267-89879 **** Predicted by CRISPRDetect 2.4 *** >NZ_NCSQ01000173.1 Aquidulcibacter paucihalophilus strain TH1-2 scaffold48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =============================================== ================== 96266 29 82.8 47 ...G........A...A..T.......T. TTATACGCGCTACCTTCACACGCAACCGACGAGGGTTGCACCATCCG 96190 29 93.1 32 ........TT................... ACAGGCACAGCAGCATTCAGCCCGCCCGAACT 96129 29 96.6 32 ..T.......................... ACAAGCGCGACCGCTAATCCGGGCTTCCTGAC 96068 29 100.0 32 ............................. TGATTGAGCCTGTCCTAAGTGACGATAACAGC 96007 29 96.6 32 ...T......................... AAGTTGCAGTTGGGCATTACGTCCAACAAATC 95946 29 100.0 32 ............................. CCAGCCACACGAGTCTTGATCGTCACCGGGAC 95885 29 96.6 32 A............................ AGGGTATCGATTGCTAAGCGCAGGTCGGGAAG 95824 29 100.0 32 ............................. CAAACACCCACACCCAGTGCCCGTCCTTGAAG 95763 29 100.0 32 ............................. CTTGGATTGCGGCGGCGCATGATTTGCACCGC 95702 29 100.0 32 ............................. GCTAGAATAAATGACCGCCTAGCCCCCTGTTT 95641 29 100.0 32 ............................. AATTGCCCCCCTAAAAATATTCAATCCTGTCA 95580 29 100.0 32 ............................. ATGGCCAGTTCGGTTCGCAGATAGAACAGCGC 95519 29 100.0 32 ............................. ACGTCAATCATGGGCGGCAGTTCGTCCAGATC 95458 29 100.0 32 ............................. ACCATGTCGTCGACACCCATGTCGGCGGCGTT 95397 29 100.0 32 ............................. CTCTCCTGCATTGATGTTGAATGGCTGCGGCT 95336 29 100.0 32 ............................. TCCGCCTTGAGACGGCAACCGCGGGGACTTAT 95275 29 100.0 32 ............................. CATCGCTTCTTGCTCTGCCGTGAGTTTATTCA 95214 29 100.0 32 ............................. CTGCACAAATCCGGAGAAATAACGGATGACAT 95153 29 100.0 32 ............................. GCGACAAGGTTCAGGTTGCTGAATATTGGTAT 95092 29 100.0 32 ............................. GTGGCTCCGGCTGCCGAAGGTGTCTTGATGAC 95031 29 100.0 32 ............................. TGACCCCGCCTAGCACAAGCGACGCGCCTTGC 94970 29 100.0 32 ............................. TTCAACCCGCCCGGCCCGACCCGGCTGTTCTT 94909 29 100.0 32 ............................. TTTTTGGGGCGAGAAACTCTCTGTGGCATGAG 94848 29 100.0 32 ............................. AACGCAATCCATGTCTAGCTTGCCCATGTAGC 94787 29 100.0 32 ............................. GCCGACAGAAAGCGCGCAGAAGCTGGTGTGGC 94726 29 100.0 32 ............................. TTTCCATTTTCATTGGCACGATAGGTGTTAGG 94665 29 100.0 32 ............................. CAGCAGGAAGCGCGCCTTGAAACTCTTGTTTA 94604 29 96.6 32 C............................ CCTTGTCGGTCGACACGCCTGCCCAGTCTTTC 94543 29 100.0 32 ............................. CAGAGCCGGTCACACGAACAATTGGCAAAGAA 94482 29 100.0 32 ............................. ACGCTGATCACGGCCACAAGATCGTCTTCAAA 94421 29 96.6 32 C............................ GCCATCAACACCGGCCGCGTGTCAAACATCAT 94360 29 100.0 32 ............................. GGCTGGGAATGCTCTGTCAACGGGCTTAACTG 94299 29 100.0 32 ............................. GGGTCGCGTATCTGCCCCCTGTCACGCTCATA 94238 29 100.0 32 ............................. AGGCCGTTAGCCTGAGACGCGCGCCAGATGTA 94177 29 100.0 32 ............................. ACTGTAGCGACGGTCGAGCGGGTCTATGCCAA 94116 29 100.0 32 ............................. GATTTTAGATCGACCCAACCTTCAATCATCGG 94055 29 100.0 32 ............................. CAACTTTTTTTCCGTTTTGCCGTCTAGTCTCA 93994 29 96.6 32 A............................ GCCGAAGCCAGACTTAGCGAGACGGCCCGTGA 93933 29 96.6 32 C............................ TCGGCATGGATCTCTTTATTGGCGCTGGCCGA 93872 29 100.0 32 ............................. TTGCAAGGCCTTGCCCTTGCTATGCCCTGCTA 93811 29 100.0 32 ............................. GCATGGCGCAGATTAAATCCGCTTAGGGATTT 93750 29 100.0 32 ............................. GCCGAGATCCTGCACAACGAAGCCCTGATGAT 93689 29 100.0 32 ............................. GCGGCAATTCTCATATAGCGTCGCAGTCTCTT 93628 29 100.0 32 ............................. CGCAAAAGTCGATCAGCTTTTCAGGCGATGGC 93567 29 100.0 32 ............................. TTCACCCGATGCCCTCCTACGTGGCTGTAATG 93506 29 96.6 32 A............................ CATCCATCGGCGGTCGTGGTGGCCGTGGCTGC 93445 29 100.0 32 ............................. CTGTTCCTGTTGTCCTTTGAAGCTGGAATGCA 93384 29 96.6 32 A............................ ACGCCGCCATTGGTGATCGCCCCAAGCGTCAC 93323 29 100.0 32 ............................. CCATCGAGACCAAGCCATAGCCGACACGCCAA 93262 29 100.0 32 ............................. GAGCGGTTGATGGCGGCCAACCCTGATGCTTG 93201 29 100.0 32 ............................. CGTGACCAAAGTCAAGGCCGTTATCAGCGCAA 93140 29 96.6 32 A............................ CAGTCGCGTAGAAGGTATCGCCATTGTTTCCC 93079 29 100.0 32 ............................. CAAAAGCACAAAATGATTTGTGGCTTTATATC 93018 29 100.0 32 ............................. GTGCAGCCCTCAGGCGGCTTCCATCGGGCTAG 92957 29 100.0 32 ............................. GACTTGGCTCGAAACTCTGATGGATCGGTGAA 92896 29 100.0 32 ............................. CCAATCGCCTGAATGGCTGTTCTGCCGGGGCC 92835 29 100.0 32 ............................. CAACACGCTCTTGTCGCAATTCATTGGGCTGC 92774 29 100.0 32 ............................. GCGAATCACCGGATGGGTCACCAACTCGCAAA 92713 29 100.0 32 ............................. TCTGCAATTTCATCGGCCATGAACTGCTCGAC 92652 29 100.0 32 ............................. GATCTGACGGAAACGCCATTGGCCAAAAATGA 92591 29 100.0 32 ............................. GGGATGTGGTTTAACTCACTCATCGAACGGCG 92530 29 100.0 32 ............................. GAGTGCATCTGTCCTGCGTCAAGAGAAGCCGG 92469 29 100.0 32 ............................. TAAGCTAGAGCAATACGTCTCAGAAGCCGCCC 92408 29 100.0 32 ............................. TTGCCCTCACCGTCCAATCAATGGCGGGGCGT 92347 29 100.0 32 ............................. AAACCGAGTTCTCGCCATATCTAAACCGCGTC 92286 29 100.0 32 ............................. AGCCCAAGCCTCCAACTGCGCGGGGGTGTATT 92225 29 100.0 32 ............................. TCTCAGAAGCAGTTCAAGAATCCAGTGTGCTA 92164 29 100.0 32 ............................. TGTCCCACCAACGAACTTCGATAGCGATTTGC 92103 29 100.0 32 ............................. TTCGTCAAACATCCACGAACGCACGAGGTCTG 92042 29 100.0 32 ............................. ATCAGCATAGAACACATACCAGCCGCGATTTC 91981 29 100.0 32 ............................. ACCCTCTGGAAACTGCACCAAGCAATAGAGCA 91920 29 100.0 32 ............................. GCGCTTTCTGACCTGCAAAAGAGTATTGGGCA 91859 29 100.0 32 ............................. CTAAATGAGGATCGCGAGGCTGTCTCGCGCGC 91798 29 100.0 32 ............................. TTTCCTGAGGGTCAAGAATTGACGCTTGATGA 91737 29 100.0 32 ............................. CTCTACGCTTGGATAAAAGAGACCGGGCAGGC 91676 29 100.0 32 ............................. ACGTCCTCTGGGTGGCGCGCGAAAATCCCAAG 91615 29 100.0 32 ............................. CAACAGGTGCTGACCATGCGCGGGGGTAAGTA 91554 29 96.6 32 C............................ GTGCGGTCTGCCTGAAAACAAAGGCTTTTATC 91493 29 100.0 32 ............................. TTGGTATAATAGTGGAAGGCATTAGCCGCCAG 91432 29 100.0 32 ............................. GATTGCAGGGGCTCTTAGAAGGCTTGGCTATA 91371 29 100.0 32 ............................. TTAGACGGGAAGATGAATACATCCGGAGGGAC 91310 29 100.0 32 ............................. GCGCTCGGTCGAGCGCCGCATGAACAGCCACC 91249 29 96.6 32 A............................ GTGATCCCCAATAGCTGGCGGGCTTTCTGTAG 91188 29 100.0 32 ............................. AGGTATGCGCCCCAAAGGTCTGCGCCCCGAAG 91127 29 100.0 32 ............................. TGCCTTCAGTGCCGGTTATGAGCCCCCGCCGA 91066 29 96.6 32 T............................ AAACCAGTTCGACACGCGAGGCTCTGCGTAGA 91005 29 100.0 32 ............................. GCGCAGGCGGCTTTCTATGAAATCACGGGTGA 90944 29 100.0 32 ............................. CATTTGGCTTGACGTCGTCGCGCATAATCCAC 90883 29 100.0 32 ............................. CTGGGCACCGATTGTGCCCGCTATGTTGAGCC 90822 29 100.0 32 ............................. CGCTAACTTGGCTGGGGGCGGTCTCAGCAACC 90761 29 100.0 32 ............................. TCTTACCGCTAAACGGGATTCAGGAATTCCAA 90700 29 96.6 32 A............................ CACTGGTGGGTATATCCGGTCCAAGCGGACGC 90639 29 100.0 32 ............................. TGGTAGTGATCATGCCACGCGCGGAAAGCATA 90578 29 100.0 32 ............................. ATCGACTGACACAGAGATACGCGGTCGCAATG 90517 29 100.0 32 ............................. TTTTTCGGTGTTCCAAACCATTGAACAAGATT 90456 29 100.0 32 ............................. AGGGTGTTTAAAAGTGTCGGATACTTCAACGT 90395 29 100.0 32 ............................. ATGCAGACCCTGTTCAACTGGGAGCCCGCAGA 90334 29 100.0 32 ............................. CTACTGATTTGCGAAGTCGTGGCGCAGGCGGC 90273 29 100.0 32 ............................. TTTATCGAAGACGCGGTGATCAACGTCGAGCA 90212 29 100.0 32 ............................. TTTATCGAAGACGCGGTGATCAACGTCGAGCA 90151 29 100.0 32 ............................. AAATGTTTACTGGCTGCTCGGTGCCGGGATTA 90090 29 96.6 32 A............................ GCGTTATTTCTTCGGGTCCGCTTATCATTGGC 90029 29 100.0 32 ............................. TGGCCCGTCATAGGCCATACCCCATACCCCGA 89968 29 100.0 32 ............................. GTTGAGGGTCATTGGGTGGCCTCGCGTTTTTC 89907 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= =============================================== ================== 105 29 99.3 32 GGGACCATCCCCGCGTGGGCGGGGGAACC # Left flank : CTTCAATCAGATCCGCCTGTAGAGACAAATGCAACAAGCGAAATCATGAAGCCGGCGCAGCCCAAAGTCATGAGCGCGACAGGTTGGGAAAATGACGAATGGTGGACGACTGCCATGGTCTGCGCTTATCTCAAACTTGGACGCAAGGCCATTTGGGAGCGAACCAGAAACTCGAAAATCGGCTTTCCAAAGCCAATCCATTTTGGAAGCAGTCGCCATCGCTGGCGGGCAGCCGAAGTCAGATCATGGGCGTGCATGCAATAACCCGAGTACCAACATCGCCATAATGTTAGGACCATCCTCCCTCAAATCGGCAAGCCTCTATCCCTTGTGGCAATTGCTCAAGAATCCTTGCCAGCTAACTGAATCTGAGTATTGACCCAGCCCTCTGATCTGGACGCTTTGTAATTGGAATCGTTTTTCTTTCTAGTTTATGGTTGGTGGCCTAGGCTCGCTGAGTGGAGCCTATGCGGAGCTTAGGCGATCCAAACTTGAGATGG # Right flank : CCTTCCGGTCGGGAAGGAGGAATTGACTTTCAGATTTACATTGTCAAACAACATATTCAAGCTGAGGGGGCACTCAAGCTAAGGCACTTCCTGTCTCTACAGGCATAAAGTTGGCTCGCTATGAAGTTGGCTGAGCTAAGAATCGAAGCCCCGGTCTATTGAAAGACCGCCTCTTCAGGGTGCGCGACACACCAAAAGCAACCCATCCACCTCGCTTAAAGTGCGTGCTGGCAGGCCAAGGGACTTGAGGCATAGGCCGCCAATCTGAGCATTGTCTCCCCAGGCCATCAGGATAGACCCGCCAGAGGCCCCCCCCCGACCACGGGCCTGAAACCAGTCTTCCATCACGATCCAGATGCGATCTCGCACGGCTGGCGACAGTTTGGGGTTCACATAGGTGCCGGGCGCGACCTCTTGCATTGCGGATGCGAGAAAGCCGCGAAATCGATCCTCAACGTCTCGGGTAATGACGACAGTGAAGCTCATGGGTAAGGACCTTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGGACCATCCCCGCGTGGGCGGGGGAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [5-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [60.0-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA //