Array 1 297558-299722 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSLC010000003.1 Raoultella terrigena isolate 18089_SP03_G5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 297558 29 100.0 32 ............................. CCATTGATAGAATATATCGAGAAATACTACGG 297619 29 100.0 32 ............................. GCGCGATTGCTTCGGTTAAGGACAGTAACCTG 297680 29 100.0 32 ............................. CTATTTACCTGAGTAGTAATAATTGCTGTCAA 297741 29 100.0 32 ............................. CCCGCGTTATGGTTTTAGTGATCGCTTCGGAT 297802 29 100.0 32 ............................. ACAATTGGTCTTCACAAAACTGCTGCTGGTGT 297863 29 100.0 32 ............................. CATCAGCAATCTGGTCTGCCGCGATGACGGCA 297924 29 100.0 32 ............................. CATCCAGCTGTCGTCCTCCCAGACCTGCTGCA 297985 29 100.0 32 ............................. TGCCTGCCCTTCATGGTGTGAATGCTGTCGAT 298046 29 100.0 32 ............................. TACGAACGTGCCGCCGAATTCGACGGCTGTCT 298107 29 100.0 32 ............................. CGATGCCGTCCGGCAGAGTGTAGGTCGCAGGT 298168 29 100.0 32 ............................. CCAGGTATTCTTCTCGGGTTTGTGATTGAGCA 298229 29 100.0 32 ............................. CCTGTGAACTATAAACGGACTGGCCACGCTAT 298290 29 100.0 32 ............................. CGCCGGAACCGCTGACTCAGTGCAACGGGTAA 298351 29 100.0 32 ............................. GCGTCTGGTCCCCGATTGTTGAGGGTCGGATT 298412 29 100.0 32 ............................. GCGCTATTGATCGGTAGTAGATCCTGATGTCG 298473 29 100.0 32 ............................. GAAAACCATAATGAATAACAGCCTGATCGCCA 298534 29 100.0 32 ............................. CAGTACGAAAAGGCTAGAACTGATGCGCAGTG 298595 29 100.0 32 ............................. AATTTTGAGACGATAGCATTTTGACGCTTGGC 298656 29 100.0 32 ............................. CGGCCAACGTGGTCGAAGTTACCCGCAAGATT 298717 29 100.0 32 ............................. TAGTCCTGTGGCGTGCCTTTGCCCGCCGAGGT 298778 29 100.0 32 ............................. TAAAAACTCTAATTTCTCAGTCTGGTGGTGAT 298839 29 100.0 32 ............................. CACATGCTGTACGCCGGCATACCGCTGAAAGT 298900 29 100.0 32 ............................. TTTTCTCTTTTCGGCCGTAAAAATGAAGTGAA 298961 29 100.0 32 ............................. GGATACGTGTTCCTCTTTTTATGGAGAATGCG 299022 29 100.0 32 ............................. CCACTAACGGGTTAACGCTGCGGCTGGATTCA 299083 29 100.0 32 ............................. TGCTCCCGGTTTTACCTGACAGCTGGAAAATG 299144 29 100.0 32 ............................. AGTGCCGCACCGTCAACGAGTGGGATAGCCAG 299205 29 100.0 32 ............................. CCCGGTTAATGACATACGACGCAATAATCGTG 299266 29 96.6 32 .............T............... CATTTTGCAGTCCGGGGAACTCTTCGATGTTA 299327 29 96.6 32 ........T.................... AGATGGAAGAAGTGGGGCCAAAGGTGCCGCTC 299388 29 100.0 32 ............................. CGTCCATAGGTCAGGGAGGTGTGCAGGTAGCG 299449 29 96.6 32 ...........A................. GTCGATCCAGTCGCTCGCGTCAGCGCTGCCAG 299510 29 100.0 32 ............................. GGGGTAATGTGTCTTCAGCATGAATATGGAGA 299571 29 100.0 32 ............................. CATCCAGTGCGATCTGCTCTTTTGCATGCTGG 299632 29 100.0 32 ............................. GTAAATCTGGTATTCACTGTCGTTATCACCAC 299693 29 100.0 0 ............................. | G [299710] ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGTTGGCAGCAGGTGAAATACTCCCACCGCAACCAACCCCCGATATGCTGCCTCCGGCAATTCCTGAACCGAAACCTATTGGTGATTGCGGTCATAGAGGGGGTAGTGGATGAGTATGGTTGTCGTTGTGACGGAAAATGTCCCACCGCGATTACGAGGTCGACTTGCGATCTGGCTTCTGGAAATACGGGCTGGTGTTTACGTTGGTGATACTTCAAAACGTATCCGTGAAATGATCTGGCAACAAGTTACTCAACTTGGAGGCAGTGGGAATGTTGTAATGGCCTGGGCAACGAATACCGAATCTGGTTTTGAGTTTCAAACATGGGGAGAAAACCGCCGTATGCCGGTAGATCTAGACGGGCTTCGGTTGGTTTCATTTTTTCCTTTTGAAAATCAATAGAATAACGGTTCTTTAATAATGCGAAATTGTTACAATCAAGTTGGTAGAGTGTTGGTTAATGGAAAGGTTATTGAAAAATAACAATATATTTTTAGT # Right flank : GGCTGATATCACCGAACTGGCGCAGAGCCTGAATCGTTCCCCGCAGCAGCAAAGCGCCAGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGCCGCTCGATGCGGCCGGGGAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGGGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCGAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAACGCTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGCGCGATGGCCAGCGCCCGGTCGCGGGTCAGCTTGCGAATCGCCGCCGGCGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //