Array 1 222809-224495 **** Predicted by CRISPRDetect 2.4 *** >NZ_ALUS01000044.1 Streptococcus agalactiae GB00929 ctg7180000004412, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 222809 36 100.0 30 .................................... AAAAATCGAAAAATAGATGTGCGTCCAGCA 222875 36 100.0 30 .................................... CCGTTCAATCTGTTCTTGCTTTTGGTCATC 222941 36 100.0 30 .................................... AAGGGTGTTAGATGATAATACCTTTTTTAA 223007 36 100.0 30 .................................... ACACCGTTGCGGTTGTTGTCGGTCACTCAA 223073 36 100.0 30 .................................... TCTATTAACAATAGTTTTATCCAATTGTTT 223139 36 100.0 30 .................................... TGAAAACAAGCGCAAAGCTGTCAGAAAACA 223205 36 100.0 30 .................................... GTTTAATTTTGAATAATATCATGTTTACTC 223271 36 100.0 30 .................................... TATGTCATTGTGATTGTGGGAATACTTGTG 223337 36 100.0 30 .................................... GGCGAACTTGTAACGTTTGACGGTAATTTT 223403 36 100.0 30 .................................... TAATGTCTTTTCCTAGAATGTACATTTCTA 223469 36 100.0 30 .................................... ATTACTTTCAAGATGTCTATGACTATATGC 223535 36 100.0 30 .................................... TATTTCATCATAGAAAATCCTGCTAGTGGT 223601 36 100.0 30 .................................... GCGATGATGGTAAGTCATCATGGACAGCGT 223667 36 100.0 30 .................................... TTTTACACACGATGTCAGATATAATGTCAA 223733 36 100.0 31 .................................... AGTACTGCACTAGGAATTGTAGAGAAGCTGT 223800 36 100.0 30 .................................... CCGATTATTTCCTACATAATACGCACGTTT 223866 36 100.0 30 .................................... AACTGTGTGATACTTTTCGTTTTTTTCTTT 223932 36 100.0 30 .................................... TTTTATAAGTGATAGAGTGTGCAACACCGT 223998 36 100.0 30 .................................... TTAAAAGATTTAAACTATCAAGCGTCAATT 224064 36 100.0 30 .................................... TTCTAAATGCTGGTGACTGCTTTGCATAAA 224130 36 100.0 31 .................................... TTGCTGCTAGACCCAAACAGTTTATTTTTAG 224197 36 100.0 30 .................................... TCCTTTTTTAGATAATGTGCGATCACGGAC 224263 36 100.0 29 .................................... TTTTACCAATGCTTCCATATCGCTTATAT 224328 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 224394 36 100.0 30 .................................... TGGTTATACATTTACTAATCCATCAGCATT 224460 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTAAGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //