Array 1 17082-13179 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWAD01000050.1 Candidatus Accumulibacter phosphatis strain Bin19 NODE_832_length_32196_cov_139.693_ID_10262231, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 17081 36 100.0 36 .................................... TGCGAAAGGTGGCTGATTCTGATTCCTCCAACAGTT 17009 36 100.0 35 .................................... TCAGATGCTGATGGCTCCCACCGGATCAGGAAAGT 16938 36 100.0 36 .................................... ACCAGTCCATCGCCGCCCTTGCCGGACGTGTAGGAA 16866 36 100.0 39 .................................... GCGCCGACGACGGGGCAGGACGCGAACGACTTGCACATG 16791 36 100.0 34 .................................... CCTCACTTTCAGCCGGGGGTTTTGGTTTTCGATC 16721 36 100.0 36 .................................... GCTGCCGTGCCGGAGGTCGTTGGTACGACCGTCACG 16649 36 100.0 35 .................................... TCGTTGACGGGAGAGTCCTGGCCTGCAAATGGCAC 16578 36 100.0 35 .................................... GACAGGTTTCCACCAGGTGAGAGAAGCGCTCCAGC 16507 36 100.0 36 .................................... GTGGTCAGTACGTCGGCAAAATGTCAGCTTGAGCGG 16435 36 100.0 36 .................................... ATCAGATGCGTGACCTCGGCGAACGCGGCCTGCGCG 16363 36 100.0 36 .................................... AAAACTTGCATTTCAATCAGCATGTTACTGGCGGAG 16291 36 100.0 35 .................................... GCGATACGGAAAGCAACCCAGCCAGCCGCCAGCAT 16220 36 100.0 36 .................................... AATTTTTTTCTACGGACCTTCCCACCTTCGTGACCG 16148 36 100.0 35 .................................... TCCATCCACCACGCAGAGGACGCCGCAAGCTCGGG 16077 36 100.0 36 .................................... CAGCGCGAGGCTGCGCTGACGCGCTGCGAGAAGAAC 16005 36 100.0 36 .................................... TCCTTCTCTAGCGGACGCGGCAGCTTCGCTGCCCCG 15933 36 100.0 35 .................................... ACAATCAAACTCAGACCACTCATCAGCAGATCACG 15862 36 100.0 35 .................................... CTGCTGGATCAGGATTTGTCGGCTGATGGTCTGTG 15791 36 100.0 35 .................................... GCAAGCAATACGGAGGCGTTTCCTACTCGATCAAC 15720 36 100.0 35 .................................... AGATAGCTGATCGAGGGCATACACCTGCATGCCCT 15649 36 100.0 37 .................................... TAAGAAAGCCGAGTCCGGCGGACCTCCAGCCACCATT 15576 36 100.0 35 .................................... TACCATTGGGGATATAGAGTATGAGCTAGATAAGG 15505 36 100.0 36 .................................... CTTCCAAATCTCCGGCACTTGCTCGCGAGTAATCGG 15433 36 100.0 36 .................................... AGTCTTCAACCGGCTGATCAGACTGCTTATTACGAT 15361 36 100.0 37 .................................... CTCTGCACGCCGGCGAACAGGATCGGCTGCCGTGTGT 15288 36 100.0 36 .................................... TACTCACGGATGCCGTGGAGGATGGTATCCGGCATG 15216 36 100.0 34 .................................... ATGACGCTCGACACCTCAGCCGTATTTGCTGAAC 15146 36 100.0 36 .................................... CGGCATTTCGGCAAAGTCGAATCTGCCTCAATCATC 15074 36 100.0 36 .................................... CCTTTTTCCCCGGCTGACAACGTGTGCGCGTTCATT 15002 36 100.0 34 .................................... ATCACCAGGTCGAACGCATCAATCCGATCGACCA 14932 36 100.0 36 .................................... AATTGCATAGATCAAGTTGCCGGAGAGAATTACACG 14860 36 100.0 36 .................................... GATCTGATCGTAACCGCACGATACGCGGCGTTCGAT 14788 36 100.0 36 .................................... CTAAGGTGTAGATTTGATCAATACCGAGTACCGCGC 14716 36 100.0 36 .................................... TAGTTGTTATGCAGTCTTGTAGTACCTCCCGCGCAT 14644 36 100.0 34 .................................... CTGCAGTAGCGGCCGTGGGTTCTGCGTCGGTCAA 14574 36 100.0 37 .................................... ACCAGTCGTGCTCGGGACCGAGGCCGCAATTCCGATT 14501 36 100.0 36 .................................... CGCCGCGCCGCAGAATCGTGAAATCTGAATATTCTG 14429 36 100.0 36 .................................... CTGATCAAATCTACACTGTAGCACCCCACGTGATAC 14357 36 100.0 35 .................................... CTGGGCCAGCGATTTGCGCATTACTCGATACTGAT 14286 36 100.0 35 .................................... TCGAGGTAGTTTCGCATGAAATCGTTGTCGAATTC 14215 36 100.0 36 .................................... GGTGCGTACCCGCCCATGGCGTGCGTTACGGGATGC 14143 36 100.0 36 .................................... GACCTAAAGCCGTCAGACCAATCCCGCAAGCTAGCC 14071 36 100.0 35 .................................... TCCGGGTCCCCGAAAGCAAATACCCCAATGAAGTC 14000 36 100.0 35 .................................... CCGTCGGCCCCTTTTTGCGCGACCTCGTAATCCAG 13929 36 100.0 36 .................................... TCTCGACCGTCGCCACCGGCATCGTTGCGATGGGTG 13857 36 100.0 35 .................................... ATATGGGATCGAACGCCCTGACCTACGCGCTGCGC 13786 36 100.0 35 .................................... GCAATTGCAACTGCAACTGTTTTGACGGGCGCGAG 13715 36 100.0 36 .................................... AACGCCCCTTTGCCCGCCGTTTCCGTGACCGCCACG 13643 36 100.0 35 .................................... AAATGTCGGCAGCGATGGCCGCCGAGACGCTCGAA 13572 36 100.0 36 .................................... TACAACCGGAACCTCAGCGTTGGAAACGTCGTGGCG 13500 36 100.0 38 .................................... CTCGCGGGGCTGGCGTCTTCGCCCCCGGCAACCGGCCT 13426 36 100.0 34 .................................... GAGTTACGCATGCTGCAACAAACCCCCCTGGAAT 13356 36 100.0 35 .................................... ATTGCCGGCGGATACGGCGCACTGCCCGGCACGCT 13285 36 100.0 35 .................................... ACTACAGGGGGTGGGTGTGTTGCCTCGTGTGCCCT 13214 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 55 36 100.0 36 GTGCCGTCATCTTTGATGCCGAAAGGCGTTGAGCAC # Left flank : ATATCCGGCACCCGAAGCGGTGGCGTCAGGCTTACAAGCTCCTGCGCGGCACTGGTGAACGGATACAGTACTCGTTGTTCCGCTGTCACCTGACGCGCTCCGACCTGGAAGCCCTGCGTTGGGAACTTGAGCAGATCCTGGACCAGGAAGACGATCTGCTGGTCGTCCACCTCTGCCCCAGGTGCGCCGGTGGAGTAGAAGTCCGAGGCAGGCCGGAGCACTGGGATGAACCACCGCCACGTTTCGCAGTTTTGTAGGAGGTCAGCGCATGCGCCGGGCAGTGGCTTTGGCTGACGTTTTCCATCTTGACAAACAAGGCATTGAAATCAACAGGTTGTTCTTTCCCCTGGAGTCTTCAGGTGCATGCTCTTCTAAGTAAATGATTTCTTTCTCTTTCCTTGACGGATTGCCGAAGTTCAACACCGTGCTCGCCATCTGCTGGCAGCCTCATGCGGACACTACGGTTTTGCACATGATATTCACGTACATGCATGAGCACA # Right flank : ATTCTCCTTACAGGGCGGTCACGCCGGCTTCCAGGCGGTGCCGTGGTGCGCTGGCTGATCGGCAATACTGATGTCAGCGGCGGACAGGAAGTCGCGAACCACATTGGACCAGGCTCTCAATTGATGACACGCCCCAAATGTGGGACCATCCCGTAGGCAGTTTTTCGCAGGCCTTCTGCTGCCCTTTCGAGGAGGAGACGATCAATGGTTGATCACCCGTTCGCCCGGTGTGTGGCGCTACACCTTGCCGGTCTGCTCGTGGCCGACAACGTGCAGGCACGGCAGCCACCGGGCAAGCCTGAAGCCGCCAGATCGGCCAGGACCGCAAGCCGGGAACACCTGGTGCCAGCCGGCCTGCGGTGTCTGCGGCGTTGATTACCGCGTCCTTCCGATAGCGTGACCAGATGAACTTCATGGAATTGCCGGAAAACCTCCCGGTTCCTACGGACGACGGTGCTGCAGCACATCTGCAAGGCTTGTTTCTGCCCGCTCTGACCCTC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCCGTCATCTTTGATGCCGAAAGGCGTTGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.00,-7.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA // Array 1 44824-46001 **** Predicted by CRISPRDetect 2.4 *** >NZ_SWAD01000031.1 Candidatus Accumulibacter phosphatis strain Bin19 NODE_525_length_46226_cov_149.207_ID_10261617, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 44824 36 100.0 34 .................................... TTGAGACTCATAAGGGCAGTGAGAGCCTCCTTCT 44894 36 100.0 35 .................................... TATAATCTTTAAAGCAGCGTTTCTCGCTTCTCCCT 44965 36 100.0 38 .................................... TTACCCGTCAGATATGATGCGTGATCCCCATCTGGGGA 45039 36 100.0 35 .................................... CATCGAGTATAGCGGTTTGAACACTGTACCTCCAA 45110 36 100.0 36 .................................... TGGCTCACCGCACAATCCACACTTGCTCATCGTATT 45182 36 100.0 33 .................................... GCACTATCAGAGCTGGTACTCCCATTTAACGGA 45251 36 100.0 34 .................................... ACCCAGGTCGTGTAGCTGTAATCTGTCCGCGCAT 45321 36 100.0 37 .................................... TAAATCTCCTTTAAGGTAATCCCAAGTGCCTTCTCCG 45394 36 100.0 36 .................................... GTCTTCGAGACTGTGCGTTTGGCTAACCGAATTCTT 45466 36 100.0 37 .................................... TCTCCAGTTTCCTGAAGCATAGAAACAACGTCTTTGA 45539 36 100.0 35 .................................... ACGAAGGCTTCGCCTTCTTCACGAGCGGTACCATA 45610 36 100.0 30 .................................... TAATTAGCTGACAGACTCCATTGGTACATT 45676 36 100.0 36 .................................... GATCCTCGTATGGCCATGACCACGTCTCCGTGATCA 45748 36 100.0 38 .................................... TCGACTCACCAGCCTTACCCAACTCTGAAAGAAACACA 45822 36 97.2 35 .........................T.......... CATTGACACACGGTGGAAATCCGCCGGATAATCTT 45893 36 97.2 37 ..........T......................... TTTATGGCCCAATCGGCCACGAACGAACCAGGGAATA 45966 36 97.2 0 .................................A.. | ========== ====== ====== ====== ==================================== ====================================== ================== 17 36 99.5 35 GTGAAAACTAAGCCCTGCCGATAAAGGGATTGAGAC # Left flank : TGAACACGCTGTTCGTTTTCATTTCCTACGACATCGCCGACCCCGGCCGCCTGCGGCGGGTCGCCACGCTGTGCGAAGGCTACGGCGAGCGGGTGCAGAAGAGCGTCTTCGAGTGCCACCTCAAGCCCGCCCAGTTGCAGGAATTGCGTGATCGCCTGGCGCGGATCGTCCGTCGTGACGAGGACAAGCTGTTCATCGCCACCCTGTGCCGCGCCGACGCCGCGCGCATTCTGGTGGACGGGCACGGCCATATCGCCCGGGACTGGGATTACTGGCTGGCCTGAGAACTTCGGGGCATATGGCGCTGGTGCACATTTTGCCGGACATGGCTTTTTGGACAATGGCTTGCGAAAATACTTCGGCATACGGGCGCCGCGTGTTGATTTTCAAGGGAAAAGAGGATTTTCGTGCGCCTGGACGGGAGCGCGGGAACGTTGTTTCGCCCGCGCCCCGAAAAGAGCCGTTAAATTCCTTGACGATCATCGGGTTGTGGAAGTAGA # Right flank : AAAACGTGGGGTATGCGTTTAGCCCCCACCGATTGCGAGCCCCCCAATCAGGCGGCGGCCGGTAGCGGGGGTGCTGAGTTGCCTTTGCGCCGCTCGGCGATCACCTTCGCCAGGTAGGGCCAGGGCAGGATGTGGCGACGGCGGCAGGTGTCGATGACACTGGCCAGCAGAGCAAAGGCACGGGTGCCCTGCCCGGTACGAGTCCCCTGGCTGAGGAGCCGGGCA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGAAAACTAAGCCCTGCCGATAAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.00,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA //