Array 1 46283-43624 **** Predicted by CRISPRDetect 2.4 *** >NZ_RYUK01000013.1 Bifidobacterium pseudolongum subsp. globosum strain 2086B Contig_13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 46282 36 100.0 36 .................................... AAGACCGGCGAACCCAAGAGCCTGCCGGTGGGTGTC 46210 36 100.0 38 .................................... TCGATGAGCGTGGACACAATCATGTCCTGCTCGAGCTG 46136 36 100.0 36 .................................... TCCGCGACCGAATCCGCCGAGGCAATCAACGAGCTC 46064 36 100.0 36 .................................... GACGAGAGCGACCAGGCGCTCCCGGACAGTCTGCCC 45992 36 100.0 38 .................................... CAGGAGGCGGGAGCATGAGCGCAGACACGTTATTGCGT 45918 36 100.0 36 .................................... TTCAACTCGATGCTCACCAGCAAGAACGAGCACGCG 45846 36 100.0 38 .................................... TGAGCCTACTCACCAGCATCGCCGGCATTCCCGAAGTC 45772 36 100.0 35 .................................... ATCGACAAGGGGGACACCACGACCAGTTGGAAAAC 45701 36 100.0 35 .................................... GCGTGACGGTTCGCGGTCAGCCTGAACTCGATATT 45630 36 100.0 37 .................................... ATGGGCAGCCACATGCTTTCCGGGTGCACACTCACAC 45557 36 100.0 36 .................................... ATCGAACAGCACTCATGCGCACCCACCGTCAAGGCA 45485 36 100.0 37 .................................... TGCCTGATCCACGCACGGCCAGGCAGACACTGGACGT 45412 36 100.0 37 .................................... TGGGCGATCCACAGGCCGGCGTTGAGTTCGCGTGCGA 45339 36 100.0 38 .................................... TTTTCGAAGTTGTGGCGCATGTGGCGGCTGAGCACGTT 45265 36 100.0 40 .................................... TCGAAGCATCATGGTTTCCAGGTCGGCGGCCATGTGCGCC 45189 36 100.0 37 .................................... ATCTCGAACCAGAAGCCGACCCGAGCCAACCATGTGT 45116 36 100.0 37 .................................... GAGCGGGCGCAGGTACCCACCCAGTACGGCACAGCCG 45043 36 100.0 35 .................................... TTTCCCAAGTCGGCGCCTTGGATCTTGGCGAGGAT 44972 36 100.0 36 .................................... ATGGGCGACACGGAACGCGCATGGGATATTGTGGGG 44900 36 100.0 38 .................................... ATGGGCACACCGCCACGACCGAACGACCCGAGCGAGGT 44826 36 100.0 38 .................................... ATGAATTAGATGCGGGTCAGCATGCTGCCCAGCTGACA 44752 36 100.0 36 .................................... CTTGAGATACGCGAGCAGGTCGATGCCGAAGTAGCC 44680 36 100.0 39 .................................... CAGATCAGCGATGGCGGCACGAAAAACTACGATTCTAAC 44605 36 100.0 38 .................................... GATATCCGCGGGTGGATCCCACGCTACGCCATCGCCTA 44531 36 100.0 35 .................................... GACGAGAGCGTGCACGCATGGGGCAAACGCGTGCG 44460 36 100.0 39 .................................... TTCTCCACCACCGACGCCCAATTGGCCGACGCACTCGAC 44385 36 100.0 36 .................................... AAGCTCGTGATGCGCTCGCGCAAACCGGTCGCGAAA 44313 36 100.0 34 .................................... GACGGGTGGCAGATCGAATGCACGGCGACTTCGC 44243 36 97.2 39 .....T.............................. GTTAACCCTGACTGTGATCGTGCCTACCAGCAGGCCAAG 44168 36 100.0 36 .................................... TGTCTGATGGCGCACCCGTACGCGCCCTCGTTCCAC 44096 36 97.2 35 ...............A.................... TGTCCGAACGCATCAACGCGAGCTCTCGCACCGTC 44025 36 100.0 35 .................................... AGTTTCGTCCATGCCGGTTCCGTCTGCGCGACGCC 43954 36 100.0 39 .................................... TCTTGACGACACCCGCCACGCCTACGACGATGCAGACCA 43879 36 100.0 36 .................................... CTGCCATTCCCGCCGGCACGGATGGTGTTCGCACAG 43807 36 100.0 39 .................................... GTGCGGGCTGACGAACGTAAGATCACGCGTGATTGGAAA 43732 36 100.0 37 .................................... GTGTTCGCGAAGACCGTGGACACCGAGATCCCGGCGA 43659 36 91.7 0 .....T..........T........C.......... | ========== ====== ====== ====== ==================================== ======================================== ================== 37 36 99.6 37 ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Left flank : ACGCACTTCAACGACGTGCGCCTGAAGAACTTCATCGAGATGCGGCACTGGGATTCGCTGCCGATCGAGCGCGCGGAACTGCTCACGCAGATCGTGAGCAACCTGTTCTACGATGTGGAGCGCCGAAACAGCCTCGAATCGTACTTCAGCGGACTGACCGGCGAAGACGTGCACGCCGCAAAGGCCGTGCTGCAGGCGCGCGGGGGAGAGGCGAAGCCCTACGACCAGCCGATGGAGTACTGGGCCGAAGTGCTGGGCGTGGGGGATGCGCTTGCCGATGTGCCGGGCGACGCGAAGTGGCCGGAGGTGCGGCAGGGGTAGAGGCTATCCCGTGCGAGGACTGCATCATGCAGCATAAAGCGGGGAAGCTCTCGCATCAATACTTTGTAAGGGTTTGTTGAGCTTGTGTAGATAAATCAGTCGTTTGTATCACGTCAATTTGTCTACCTCTCGCAAAAGCGCTTATCAGACTATGTGTATCAGTCTGTATTATGGCTACT # Right flank : GATATTCAAGTAGGATATTGGAGGGTAAAGCCGAGGTCATCTTCGAAGTTTCGGCTTCGGAGACTCGCGGAAAATTAGGCATCGGACACCTGAACTTATAGTCAGTTGATCGTCTTAGAAATCTTTGCTCTGACTTTTCTTGTTTTTTACTTTCGACATGATTCAAAGCACTCTGATTTTTATCTAAGCAAAAATGAAGTATGCTGAGAATAACGCAATGAAGCGAGGTGAAGGGTTGGAAGATACATTACCAATTAGTCTCATATGTGACTTTATCTTTTGTCCACGAAGGGCATGGTTAGAAATCCAAGGTGAGAAGATTGAGTCGTTACAGATGGAGCGCGGTTTTCATGACCATCGTGCAGTGGATGACGCCAACGGTGGCCGCGGGGATACTGACTATAGGGCAGTTAATGTGAATCATCAGGGGTGGGGACTGTCGGGGCGATTAGATGCGGTCCGGTTGAATGAAGACAACGGTGTGATTATCCGTGAATATA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGAAGTCTCGGCTTCGGAGCTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.10,-7.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //