Array 1 7056-8977 **** Predicted by CRISPRDetect 2.4 *** >NZ_MNBW01000038.1 Nioella nitratireducens strain SSW136 contig38, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 7056 29 100.0 32 ............................. CATCTGGCCCCGGCGAAAGCCCGGCCCCCGAC 7117 29 100.0 33 ............................. CGCAAATATCGCCTTGACGTGGCCACTAGCAGC 7179 29 100.0 32 ............................. TTCCCAGAACCACTCTTGCGGCGACATGGCCC 7240 29 100.0 32 ............................. CGGGAGACGGTGACGCTGTATGGTGGTGTGTC 7301 29 100.0 32 ............................. GCCCTGCGAGGCCTCACGCACCGCCTCGGCGG 7362 29 100.0 32 ............................. GGACATGTCCCCGCCCGCAGCCTTTTGCCCAA 7423 29 100.0 32 ............................. ATGTCAGGCAATGGCAAGTTTGTCGCCGCTGA 7484 29 96.6 32 ............................T ATGCGCGGGGGATCGAGGCGGCGGCTGCTTAC 7545 29 100.0 32 ............................. ATGACAGGGCGGGCTTGCTTTTGTCGGCTGGT 7606 29 100.0 32 ............................. TCGCCCGCCTCGTTTGTCGCCGCTGGCGTCCA 7667 29 100.0 32 ............................. CGTTCTCGATATTGATGTTTCCAAGATTGTCG 7728 29 100.0 32 ............................. CAACAGAAGCAGGTAGATCGCGCCTAGGCTAA 7789 29 100.0 32 ............................. CCAATCGACAATCGCAGTGCGCCAAACCCCGG 7850 29 96.6 32 ..................C.......... CGTCCACCTCGGCATAGGCGCGCTCGATCTCG 7911 29 100.0 32 ............................. GTGACTTCGCAGCCGTCCGTTTCTAAAAACGG 7972 29 100.0 32 ............................. CAGTAAGCTCTTGCGGGGCAATGGTCATTGAC 8033 29 100.0 32 ............................. TCGAAATCATGGGCGGCAAGGCCGATGTAGTC 8094 29 100.0 32 ............................. TAGTAGCCCCGCGCCCCCGCGTCTTTCATGTC 8155 29 100.0 32 ............................. CGGGTTGACCCCCACGTGACAAATTGATACGC 8216 29 100.0 32 ............................. GAAGGGAGATTGACCTTGAAATTCCATTGGAC 8277 29 100.0 32 ............................. GCTGGCGCAACTCAGTCGGGACGCGCGGCCCC 8338 29 100.0 32 ............................. GCCGTGTCTGACACGCATGCGGTAATGGGTCA 8399 29 100.0 33 ............................. TCAGAAAATTCCGCATTGTCCGCTAGTGCCTCC 8461 29 100.0 32 ............................. CGCTTGGTCTATCATTCCGTTCTCAAGATAGT 8522 29 100.0 32 ............................. TATTCTTCCATGAATACGTTCACCGCGTCTTC 8583 29 96.6 32 ...C......................... GCCCGCAACATCCGGCCTATGGGCTGCGATGC 8644 29 100.0 32 ............................. GGATACCGGATGCCAGAGGAGACCCTGTCAGA 8705 29 100.0 32 ............................. GCTGGTTCGCTTGGTGTAGGGGTTGCCGAAAT 8766 29 100.0 32 ............................. CCGCCCGGCAGGTCCTGCGCGAAATGGAGGCA 8827 29 100.0 32 ............................. TCGGCAACCTCAGCCCCACCCGCCGCAACGCC 8888 29 100.0 32 ............................. ATGTCCTCGCCCGCCGCGTTTCTGACGACGAT 8949 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 32 29 99.7 32 GCGTTCCCCGCACACGCGGGGATCAACCG # Left flank : CCGCACCGGGCTTCTGTCGAAGATCATCCCGCAGATCGAAGAGGTCCTGACCGCTGGCGACCTGCCAAAGCCCGAGCCGCCCCCCGATGCGGTCGCTCCGGCGTTCGAGGAGAATCAAGGAAGTGGCGATGATGGTCATCGTGGTTAGCCGCGCTCCGCCCCGGCTGCGAGGACGTCTCGCCGCCTGGTTGCTGGAGATCCGAGCCGGGGTCTATGTCGGTGACTACTCCGGGCGCACCCGGGAAAGGATCTGGGATCAGGTCCTCGGCGGGATCGAGCAAGGGGACGCCGTGATCGTCTGGCACTCACCGACCGACCAGGGTTTCGACTTCGCCACCGCAGGCCAGAACCGCCGTATGCCAGAAGATTTCGACGGGCTGAAACTGATCCGTTTCCTTCCGTCAAAAGGGTGAATCTCGGCATCGACCGGAAACCGGAAAATATCGGTATGCTCTTTGACAATTGAATAATTGTGTGCTTTCAGAGGTTTCTGGCAAAGG # Right flank : GAGGGCGCTGCAAGCCGTGCTTGACCGCAAGATCCGATAGGGCGCCGGATACCGGTGCCAGTCATACCGGTTTTAGGTTAGCGCATGACATCCAGTAAGTTGCTTTGACTAACCGAGATACCTTAGATCTAACGTTTCTGCTGCTACTTTTTTTCACCGATCATGAGGCGGACGCTCGATATCTTCCTTTGCACAAACAAAGCACATGGACAGTCACACACTATCCGGATGGCAGGTTCAGGGTAGCGCTATCCCCACCCATCCCCTCAGCATTCCCGTCGATGCCACCCGTATAACTGAATCAGTCAAACGCTGCATTCATACGGAGAAACACGAGCATGACGAATGGAAATCCCTATGAGGGAAGCGCCTTTTCACGGTTCTTGATAAAGCGAGTGCTGGAACTGAAGACGGTGAAAAGCCAGCGCGATATCGCGGTCGAGGCGGGGTTCGCGAACCCGAACATGATGAGCCTGCTGAAATCGGGCCGAACCAAGATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACACGCGGGGATCAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GCGTTCCCCGCACACGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: F [61.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //