Array 1 149488-145917 **** Predicted by CRISPRDetect 2.4 *** >NZ_FJAB01000001.1 Legionella pneumophila strain 2531STDY5467307, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 149487 28 100.0 32 ............................ CTTAACATCAATCCGTAGATATCCAGCAAAAT 149427 28 100.0 33 ............................ AGAGGAAAATGACGACGACGATCCTTGGGCGTA 149366 28 100.0 32 ............................ TATCAAATTTTGTGCTTCTGGGCTTTCGGGAT 149306 28 100.0 32 ............................ CAGGAATTTCTGGAAGTAAATCCAGGCGGTGT 149246 28 100.0 32 ............................ TCATTAGCCAATTCTTCTAAAATTGTTGTTTC 149186 28 100.0 33 ............................ CTATCTTCAAATCCATAGCTAGTTCTGGATTAT 149125 28 100.0 32 ............................ TGTAACCTTGATTCTTGACTATTAAAATCCCC 149065 28 100.0 32 ............................ ATATAAGAACAATCGAAGTTCCAAATGTGGAA 149005 28 100.0 32 ............................ CCAAATTAAGCAGCATTCTTCAATACTTTTAC 148945 28 100.0 33 ............................ CCATATGATACGCAGACAATTGCATTTTTTGCT 148884 28 100.0 32 ............................ TTTTAACAATGCGTTGTTCATTGCGTTTATTC 148824 28 100.0 32 ............................ TAGTATTGTAACTGGTCAGTTTAGGTCTAATT 148764 28 100.0 32 ............................ TTTAGAGATATGTCATTTGTTTGACCATCAGA 148704 28 100.0 32 ............................ TCCAATGAAGAAGCCTAGAGAAACAGACACAT 148644 28 100.0 32 ............................ CACACCCACAATAAACGTCATTGTCTTTGTGC 148584 28 100.0 32 ............................ ATTAGTTATTATTAATCGTGATGATTACCGAG 148524 28 100.0 32 ............................ TCTGAGTTAGAGCAACTTGAAAAACAAATACA 148464 28 100.0 32 ............................ AATAAGTAAGATTTTCCACATCCTGGGCCACC 148404 28 100.0 32 ............................ ATTAAGTCAAATAAAGTTAAGAAATTTAATTT 148344 28 100.0 32 ............................ TTATGGAACGACAGCATGTAAATGGGATACAG 148284 28 100.0 32 ............................ GCTAGTTTTCCAACTTAAACTAATTCCTACTC 148224 28 100.0 32 ............................ AGCAATGAATTTGATAGGCTAGCGGTCATTTA 148164 28 100.0 32 ............................ TATTAATAATATTTTAGAAGATTGGCACATAA 148104 28 100.0 32 ............................ ATTTAAAATCAGGGTGAACCTCAAAAGGAATC 148044 28 100.0 32 ............................ CTCATGACCTTTAGCCGTAGATATAAAAAGAT 147984 28 100.0 32 ............................ TCAACGCCCTGCGCTCAACAGGATTAACCTTG 147924 28 100.0 32 ............................ GACTCCTCAACTATCTGTTCAATTGGTTTAGG 147864 28 100.0 32 ............................ ATCAGCGAGGGAAACATCAGTTCCTCCGGTTA 147804 28 100.0 32 ............................ TATAGAGTCGAATAATACTTCTCCTCAGTTTA 147744 28 100.0 32 ............................ GTGTATATGATTTAACGCTGATTTCATGGGGT 147684 28 100.0 32 ............................ TTAATAGTTGTCTGATTATCTTATAATAAAGT 147624 28 100.0 32 ............................ AGTTTCTATCAGGTATCGGCGGGTAATCATAA 147564 28 100.0 32 ............................ TTTGGACGTTTTATCCTCCACAGTATGCCAGT 147504 28 100.0 32 ............................ TACACTCATAATTGAAAGTAGTGCAAAAATAA 147444 28 100.0 32 ............................ TATGGTGACGACTTAAACGAAGCGTTAAACGC 147384 28 100.0 32 ............................ TACATGCAAAAAGGCGGTAAAGCATGGCAATA 147324 28 100.0 31 ............................ AAAGCCGCCGGAGCTGTCACTACGTCATTCG 147264 28 100.0 32 ............................ AATAAGATGAAAAGTTGTTGACAAAATGTACT 147204 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACTATTAATC 147144 28 100.0 32 ............................ ATCTAAAAATTGTTGAACAGTTGGAATTGGCT 147084 28 100.0 32 ............................ AACATGGACTAAAATATCAAGAGGCATAGCTT 147024 28 100.0 32 ............................ AAAGAAGAACATAGCCAGCCTACTAGCCCTTA 146964 28 100.0 32 ............................ TTAACAGTTAATCTTTCAACATCAGATAAACT 146904 28 100.0 32 ............................ GTCAGTTGTTCGATAGTTATCGATTATAAAGC 146844 28 100.0 32 ............................ TATAGGCGTGAAACAGAGCGTTTATTGCAGTG 146784 28 100.0 32 ............................ ATATACCAGCGATAAAGGAGGAACCATTAATT 146724 28 100.0 32 ............................ TCATAATTTGGAATTGGGGTAAAATGCTCGCC 146664 28 96.4 32 T........................... AATGTCTGATGGATCGATCATACAAAGCCCAA 146604 28 100.0 31 ............................ AATGTGCCAACAAAATACAAGTCATTGACAA 146544 28 100.0 32 ............................ GAGATATTATCTTTGAAATCCATTTACCGCAG 146484 28 100.0 32 ............................ GTTTATTCGCCAGTCTCGCACCAGTATGTATT 146424 28 100.0 32 ............................ TTGTACAATGCCATCAGCTAATACATCTGTTT 146364 28 100.0 32 ............................ AAGATGAGACAACGCAGGCCAATAAAAATCAA 146304 28 100.0 32 ............................ ATCTTCAAAATATTCATAATCATTGGATTCAA 146244 28 100.0 32 ............................ AACATGCGCACGAATTAGCCAAGTTTGCAATA 146184 28 100.0 32 ............................ GGTAAGCCTATGTCCTCGACCAGACGGTCATC 146124 28 100.0 32 ............................ AAAAGATGAGGCTACAAAGTCATTAATCAAAA 146064 28 96.4 32 .............T.............. AAATCCCCAAAATCGCATTTGAACTGTAAATT 146004 28 100.0 32 ............................ GTAGGAATATTTATATTGTATGTTGTTGATGA 145944 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 60 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : CGGTGTCTCGTAAACAGCCTACAATGAGCCAATCAAAATTGAGGCGGTTAATTAAACGTAACTCCTTGACAGAAGATGAAATCAGGCAATACAAGGCAAAGATGTTTTCCAAAGGTCTGGATAATCCATATATTGAACTTGTGAGCGTATCAAACGGGCAAAGGCACCGACGCTATATTGAGTTTGGCGAATTGTTCAATGAGCCAATTCCTGGCCTCTTTGATCAGTTCGGCCTTTCTAACAGTGCTACTGTTCCATGGTTTGATTAAATTTTAGAACAAGGTAAATTCCTTGAGTTCGATAGGTTAAAGTAAGGAGATATAGTTTGGTCAAATGCTTCAATACTTGATTATTTCGATACTTCTAACGACCAATAAATTTAGTTCTTTAAAAATTTGTCTTAAAATCAATTGGTTATAAATTAGCTGAAAGATATTGGGTAAATCGATTTTTTTCAGCTAACTTTCTGTTGTAACTATTTTTTTAAGATTTATATTACA # Right flank : AAGCACGTACGTACAGGGTCAGATCTTGCTTTTTGCCTTTATCCATAAAAGACGACAAGCTTGGAATTACCGCTTGATAATTATTTCCCAATGCATTAATTTTCTATCAAAAGGAATTAAGCAAGTCCAGGAACAGCGATGGTAAGACCTTTGCGTATTGAGTATGCTGGTGGGCTCTATCACATCACCAGTCGAGGGAATAGAAAGGAAGCGATCTATTTATCAGATGAAGACAGAGAGAATTTTTTATCTGTTTTGGGTGATGTTTGTTTAAAATATCAGTGGTTATGCCATTCGTATTGTCTGATGACAAATCATTACCATTTACTCATTGAAACTCCGCTCGGTAATCTTTCAAAAGGAATGCGCTATCTGAATGGGGTATACACTCAGAAATTTAATAAATCACACAAGCGAATTGGGCACGTCCTGCAAGGTCGCTATAAATCTATACTGGTTGAGAAAGACAGCTATTTATTGGAGTTGTCGCGTTACATAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //