Array 1 32220-28772 **** Predicted by CRISPRDetect 2.4 *** >NZ_OOGT01000006.1 Acinetobacter stercoris strain KPC-SM-21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 32219 28 100.0 32 ............................ TCGAAGCTGCCTTTCTAGCATCGCTTTCGTCT 32159 28 100.0 32 ............................ ATCAAGAAATATAAAACCAGGTTTAAAGAATT 32099 28 100.0 32 ............................ AATGGTAAGGTTGAATGTATTGATGCCTTGGA 32039 28 100.0 32 ............................ ATACGTGGGGCTTTATTTTGGGAGAGTGTTAT 31979 28 100.0 32 ............................ ATACCAAAATGGCGCATCATAAATAGCATGTT 31919 28 100.0 32 ............................ CCTTGATTGTAATATGGTATCGTTGCGCTATT 31859 28 100.0 32 ............................ ACTAGGACAAGCTCCTTTTGAGTAACCCAGCT 31799 28 100.0 32 ............................ CTAATTTGCATCGTCTTAAAGTTGAGTTGTCA 31739 28 100.0 32 ............................ AACCGTTGCAGATTCTAAAGCATCAACAACAC 31679 28 100.0 32 ............................ GTAAATGTGGGAAGGAAAAGGAGATTGAAAAT 31619 28 100.0 32 ............................ TGTATTGCTCGTCAGTCATGCCATTTCTTTTT 31559 28 100.0 32 ............................ TAAAAGAAATTTCTAAAAAGTTTGGGCCAAAT 31499 28 100.0 32 ............................ TTGTTGTATGAAGCAAATGATCCTTGCTCTAC 31439 28 100.0 32 ............................ ACCAAGTATGCTCATCTTTGAAAAACCCACCT 31379 28 100.0 32 ............................ AGGAACATGGGAGAATTGGACTGATTGCAGAA 31319 28 100.0 32 ............................ ACTAACAAAAATGGAATGCAGGACATTTGCAA 31259 28 100.0 32 ............................ ATGCCTAGGATTTCAGAAACTCGTTGAGAATA 31199 28 100.0 32 ............................ TGCGGGCATGAATGCTACCGGTGAATATGACA 31139 28 100.0 32 ............................ TTGTGCAGATCTACAACAGCTGGAATCAGGGC 31079 28 100.0 32 ............................ AGCATGTCACATGAGCATGATGACCAATGGGA 31019 28 100.0 32 ............................ GATTTCACGATGTTTCGTGCTGTGGATGATAC 30959 28 100.0 32 ............................ ACACGCTGATCCGCCCAATTACATTCGACAAT 30899 28 100.0 32 ............................ CATTCGCGTGTAACCAGCTTTACTTGGTATGT 30839 28 100.0 32 ............................ ACTTACCCTTTTGAAGTCGACCCCATATTCAA 30779 28 100.0 32 ............................ AAGCAAAAAACACATCATCTTTAGTGTGAATT 30719 28 100.0 32 ............................ ACAATACCCAGTCATCTACAGCCTTATTTACT 30659 28 100.0 32 ............................ CAGCCTGTCCAGTTCCTTTTATGGCAAAAACT 30599 28 100.0 32 ............................ AGCATTAGGCGCGTATCTTGGAAACATTCATG 30539 28 100.0 32 ............................ TTGTTGATGTGAATCTATATACATCTGTACCA 30479 28 100.0 32 ............................ CACATCGTCATGCTTAACCTTGTGCCTGTATC 30419 28 100.0 32 ............................ TTCCTCTGGGTTGATTTAGCATGAAGCCCCTA 30359 28 100.0 32 ............................ TGTCAGTTTTACATTCTGATCATCTTTATTTT 30299 28 100.0 32 ............................ TTGTTGGAATGAACCCAACTTCACTACCAAAT 30239 28 100.0 32 ............................ TCAAGCCCTCTTTTGCGTCGGGCATTTAGAGC 30179 28 100.0 32 ............................ GACCAAATACGCTGCTCCGAGCTCAGCAAAAG 30119 28 100.0 32 ............................ GATTTAGTCGAAGCGGTGGCAAAGATCGCGAA 30059 28 100.0 32 ............................ TTGGGGAAAAACCGTGAACAAGATCACATTTA 29999 28 100.0 32 ............................ TATTCCTAAAACAATGCCCCTGTAATAGGGGC 29939 28 100.0 32 ............................ TCACCCGATAGCGCCCAATCCGGGGCGCTGCA 29879 28 100.0 32 ............................ GGTCGGCGGTTCGCTTCACCGGTGACGGGGTC 29819 28 100.0 32 ............................ TTTGAAGCTTTTGTGCGGTCTAGGTACTCTGT 29759 28 100.0 32 ............................ TGCTCCTTTAACTTAGCCGTTGCCTCAGCTGT 29699 28 100.0 32 ............................ GCTATGGCTGACTTCACAACTGCTTCGTCTAA 29639 28 100.0 32 ............................ TCGGGAATTTTAACGCCGGAATAAACCATGTT 29579 28 100.0 32 ............................ GATTTGCTAAGAAATGCGCCTGATATTTATTG 29519 28 100.0 32 ............................ TCACATCCAACGAACCATCGGCATTAGTGGTA 29459 28 100.0 32 ............................ GTTATTCAAAACTCTCACAGCTCGCATGTCGC 29399 28 100.0 32 ............................ TAACACATCATCTGTTCGAATGTGTAAGACCT 29339 28 100.0 32 ............................ AACATAAGTTTTACTGGAGTTATTCTTAAATA 29279 28 100.0 32 ............................ TTGAACATCACTTCGCAGTCACGTTTAACGTG 29219 28 100.0 32 ............................ TCTCAAAATCTGTTTGATACACAAATGGCAGA 29159 28 100.0 32 ............................ TGTCCGTACTGATGCGCGTTGGTTTCAAGATT 29099 28 100.0 32 ............................ TCAAGCTGTTAAAATTCTAAAAGTACATCGTT 29039 28 100.0 32 ............................ TGTGGAAGTTCGTCGCGCTGGCGGAACGTACC 28979 28 100.0 32 ............................ GTTAATACCTGAAACAGGGATTGCTGGATTTT 28919 28 100.0 32 ............................ CTCATCGATGTAAACAACATGTATGTTTCATG 28859 28 100.0 32 ............................ ATATTCGTTAAATAACAATAACGCCATTTCCG 28799 28 85.7 0 ........................AGCT | ========== ====== ====== ====== ============================ ================================ ================== 58 28 99.8 32 GTTCACCATCGCATAGATGGTTTAGAAG # Left flank : GGTCGTTGGGCTAAGGCATTATATCGCCAATTGGCTCAAGGGTTTGATTTTGAATTTAATCGAGAAGAAGGTAAATCTTCACATGATTCGATGGCTGATACAGCAAACAGTTATCTAGATCATGGCAACTATATCGCTTATGGATATGCTGCAGTGACTTTAAATGGTATGGGGATCAGTTTTGCTCTGCCAATTTTGCACGGTAAAACCAGACGTGGTGGACTGGTATTTGATATTGCTGATTTGGTTAAAGATGCCTTTGTTATGCCCCAAGCATTTGCTTCTGCCAAGTTTGGTCATAATCAAAAAGAGTTTCGCATGCAGTTGATAGAAACCTGTCAAGATCAGGATGTACTAGACTATATGTTTAGCTTCATTTCTGATCTTTGTAATAAGATTAAATAATTCAAATATTTATAAAATACTTGTTTTTTGATGTATTTTCACTCTTTAATAGCTTAACAGTTTATTATCTGGAGTATTTTTTATAAAATACTCCA # Right flank : ATTACACCATCAAAAATACCCCTCAATATTTAAATATTGAGGGGTATTAATCTAGGACTGCTTCCAGTGAAAAGAATATTTAGATCATTCATCAGCAAGAGAACATTCAAAATTACCTGGATTCTGCGCACAGCGAATTTTCTTTAAAATTTTCATCATTTCGGGGTTGTAGTAACCTTCTTTGGTCATTTGAATACGTGCTTCACGCATAATTCGGATATATCCGGGTTTATCTGCCTCGCGGATATCCATCCAATATTTTGCAGGAATTTGTTTTTCAAGCTTATCTACAAACTGAAATGCTGGTGACAATTGTTTGGAAATAATCTCACGAGCGACTGATCCCATACCCACAGGAAATTTCCCCCTGTGCATAATCAACACCCCTGTCAATTGTACAATTGGAAATCGAATGATTCCTCCGACAACATTTCCAGATTTGTCCTGCATACCCTTGTGTAGTTCCAATGGATCGAACAACAATGCAGGACCTGCCATAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCATCGCATAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTTGCCATCGCATAGATGGTTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-76.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 11281-13409 **** Predicted by CRISPRDetect 2.4 *** >NZ_OOGT01000047.1 Acinetobacter stercoris strain KPC-SM-21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 11281 28 100.0 32 ............................ ACTTTGATTCATCCTCTGTTAAACCCACGCCT 11341 28 100.0 32 ............................ ATAAGTTGACCATGCTCATTCATTTCATAAAT 11401 28 100.0 32 ............................ GTAAGCATAGCGAGGATCAAATTGATTACCCA 11461 28 100.0 32 ............................ ATCCTTTGCCAAAAGTTGAGAATGAACTTAAT 11521 28 100.0 32 ............................ AAAGTATTCCAACTCTATCCTTAATTTCATTA 11581 28 100.0 33 ............................ CATTGCCCCAGCAGCGCCCTGCCAGTTCTTGAT 11642 28 100.0 32 ............................ TTGATAGTGAATCGATAGGTAAAGAGCTAGAT 11702 28 100.0 32 ............................ AAGATGGATCAAATCCTTTCCAGTCTCTTTGA 11762 28 100.0 32 ............................ TCCGCACCGCCATTGCTTCGCATGACGAAGAT 11822 28 100.0 32 ............................ TTGTTACGTGCCGTCTTACTGAATGCATCTTC 11882 28 100.0 32 ............................ AATATTTAAAACCAAGAATTGGCTTATTAAGT 11942 28 100.0 32 ............................ AGTGTGAAGCGTGGATCTGCCAGCCTGATTCA 12002 28 100.0 32 ............................ TGATTCACGAATCGAAGATTGACGTCATTCAA 12062 28 100.0 32 ............................ TTGGTAGGGGATATATTTACTCAGGATTACCT 12122 28 100.0 32 ............................ AGTCGTCATATTCGGCTGCCCGTGGTGCATTA 12182 28 100.0 32 ............................ GTGTTCGCGCCAATCATGGAAATTCTTGTTCA 12242 28 100.0 32 ............................ ACTTTGATTCATCCTCTGTTAAACCCACGCCT 12302 28 100.0 32 ............................ TCGTAGCAATAACCACAGCAGTTGATAAAAGT 12362 28 100.0 32 ............................ CATATCATTTAAGCTTTGATTTGCTTTTTTGA 12422 28 100.0 32 ............................ ACGCTCATCACCCATCCAGTTTTCATCAAAAT 12482 28 100.0 32 ............................ AAAACACATCCAGTGGTTTTGAGTAATCATTA 12542 28 100.0 32 ............................ GTAAATATCTAACCCAATAAATGCGAAATACT 12602 28 100.0 32 ............................ CTTAGTGCAATCTGCATCTTTCTTATATTGCC 12662 28 100.0 32 ............................ TTAATTATGAATGTAGGGCATTGATTATCCCC 12722 28 100.0 32 ............................ AGATAATGACCTCCATGCAGAATATAGGTTCA 12782 28 100.0 32 ............................ TTACAGCAAAAGTAACTTTTTATATTTCTATT 12842 28 100.0 32 ............................ AATAATCAAGTTTGTGGTAAATCATTAATAAC 12902 28 100.0 32 ............................ AAAGCCAAAGGGCATCATTATTGACCACGTTG 12962 28 100.0 32 ............................ GACAATTTATTAATGCGCATCAGCGACGTGAA 13022 28 100.0 32 ............................ AAATTGTTATCCGTCATCCAAATATCCACGTA 13082 28 100.0 32 ............................ CGACGGCTAAAGACCCTCGGACTTTTCACAGT 13142 28 100.0 32 ............................ AAAAATGCACTGTCGGGGAAATTGTCACTTCT 13202 28 100.0 32 ............................ CGCCCCACCGAGTCGCTATCTCTATATATTCA 13262 28 100.0 32 ............................ AAATACAGAATTAACAGATTATCCAGCTAATT 13322 28 100.0 32 ............................ TGCAATGGATATTGTGCTTGAGATTTATTCAG 13382 27 78.6 0 .........T..A...-..A....T..A | T [13406] ========== ====== ====== ====== ============================ ================================= ================== 36 28 99.4 32 GTTCACCATCGTGTAGATGGTTTAGAAG # Left flank : AGTCAGTTTATCGGGGTTTTTAGTCCTTATAGCATGTATTAATTTACTGATGGACGAGCGGAAAAGGGAAGTTGCCTTACTTCGTTCGTTTGGTAGTTCCAAAGCCAAACTTAAAAATATGATGAGTATGGAGATCGGTTTTATCGGATTGATGGCAGGAATCGTGTCTTGTTTCTTTGCTGAAGTGATCAGTGCGATTGCAAGTTATAAGATGGAGTTGATTATTCAAGTACATTGGGAGATTTGGATTATTTTACCAGTCGTTATGACGGTGTTATGTATGCTCATCGGACGTTACCGTTTGAGTTATTTAAGTGAGATTCCACCTTTACAGAGTTTAAGGGAAATCAATCAGTGATTCCTGGATTTAGCTTCGATTTTATGTTGTGAGAAAGTTATTTTTAAATCAATCAATTAGGATGTTCGTTGGAAATAAAGTGTTAATGATAAAAAATATGCTATCTTATTTATATCACTAGGGTTTTGTTTTTTAAACTCTA # Right flank : ATGAGGTCTAAATCATCCAGAAATAGATCTCATAGGTTTTCTACATTCCCAACTGATCTTTCATTTGTACCCAAATTTCTTGCCAAACTGGAGCAATAGGTTGCACAAGTTTCATTAAATATAAATAGATGAAATATGTTGCGATGATAGCAGCAATCAAAATAATGATTCTTGAGAGCATGCCCATTTTTTTCCGTTCAACATAATACCACGCGATAGCCAAAACAGCTCCCATGATCATTCCACCGACATGTGCTGCATTATTAATGCCAGAAGCTAGCATTCCGAAAGCCAAATTGATCACCATAATGGTGATCAATGATTTTTTATCGAGTAATAAACGCTGATGGGGCAAAGGTGAGAAAAAAGACAATGCTGTTAATGCACCACCAATTCCCATAACTGCACCTGATGCACCTGCACCAACTTTGGGTAAAAGATCGGGACTAAAGTTTTGAAGGAGTTCATAACTATGCTGAATATCGATATAGCCACTGAGT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCATCGTGTAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACCATCGTGTAGATGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 8479-11272 **** Predicted by CRISPRDetect 2.4 *** >NZ_OOGT01000010.1 Acinetobacter stercoris strain KPC-SM-21, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8479 28 100.0 32 ............................ ACATCTTCCTCAACTGTTTCAGGAGCAAATAT 8539 28 100.0 32 ............................ AATACGCGGAGATTGAACAGGTGCGACAACAT 8599 28 100.0 32 ............................ TGCCAGTAATAATTTTCATTACTTAACTGTAA 8659 28 100.0 32 ............................ ACGAATTTCATTGATTGTAATACCCGCTTTAT 8719 28 100.0 32 ............................ AACCAGGGAGGTCTAATGGGTCTATCATGGCA 8779 28 100.0 32 ............................ ATGTGGAGAATGACAGGAAATGGCGATTGCTA 8839 28 100.0 32 ............................ AATAGATCCAATCTTGTTATCAAGATCCTTGA 8899 28 100.0 32 ............................ CCCCAATAGCAATCGCCATTTCCTGTCATTCT 8959 28 100.0 32 ............................ ACAGAGCAGACAAACGCCATCTATGGCTGATT 9019 28 100.0 32 ............................ ATCTTGAGCAGTACGAGCATGATTAATGCCAA 9079 28 100.0 32 ............................ ATGAACCGCCGTTTAAATGCCCGCAATCATTA 9139 28 100.0 32 ............................ TTAATTATGAATGTAGGGCATTGATTATCCCC 9199 28 100.0 32 ............................ ACCGCCACCGATTTCACCACCAGAGGATAAGC 9259 28 100.0 32 ............................ AACAAATTACCTCACAAGAAGAAGTCGCGTAC 9319 28 100.0 32 ............................ ATCTTGATATAGTTTGCTGACTTACTCCAATC 9379 28 100.0 32 ............................ CAAATGATACGCTTGTAATTAAAACAGTAGCA 9439 28 100.0 33 ............................ AATCCGAAGATCGAAATGGAAACGGCTTTGCTA 9500 28 100.0 32 ............................ AAATCGAAAAAGATGCTTATGATAATGGCTTT 9560 28 100.0 32 ............................ ATTATCCAGTAAAATCCATTTGAAAAATCAGA 9620 28 100.0 32 ............................ ATGTACTTGTCCATAATCAATATCCTGCTTTT 9680 28 100.0 32 ............................ TGAATACTGTTTATCCACACCACGCATGAACT 9740 28 100.0 32 ............................ TGCGAGGTGAGCATGAATAAGCATATTCAAAC 9800 28 100.0 33 ............................ CAAGATCCTGGACATTGGAAGGTGAAGTTAAGA 9861 28 100.0 32 ............................ AGAAGCGCGTTCTGCCATAGGTGCGCCAGCCT 9921 28 100.0 32 ............................ AATAGTTATGGTCACCATCAAAATATAATGGC 9981 28 100.0 32 ............................ TCTATGTTTCGGTTTAGTCATAATATCAAATA 10041 28 100.0 32 ............................ ACGCATGAACTCATTTGCCATGATGTACTGGA 10101 28 100.0 32 ............................ ACTCGGAGCATTATCTCTAATCTCTTGCTCAG 10161 28 100.0 32 ............................ AAAAACTGCAAAAGGCGTTGAAGCACTATCAC 10221 28 100.0 33 ............................ ATTATTTTGAAGATGATATTAAACCTCTTTAAT 10282 28 100.0 32 ............................ TAGTAGACGGCGCTTGGTCTGACGTATCTAAA 10342 28 100.0 32 ............................ TCTAAAGATCCTGTGATTTCTGCTTCTGTAGC 10402 28 100.0 32 ............................ AAAGTGTACGCGTAGACCAAGCCCGGGGGCTC 10462 28 100.0 32 ............................ ATTATGTTAATCACTATCATTTCTCTCATTTC 10522 28 100.0 32 ............................ CTATGGCTATAGATAATAGCACTGTTACGAGA 10582 28 100.0 33 ............................ CATCGAGATAGATATATAGATTTACCCGATTTC 10643 28 100.0 33 ............................ CTTCAAAAAAAAGCCCGATATGTGTAGCAGATC 10704 28 100.0 32 ............................ TGAAACAGGGATTGCTAGATTTTTGAATAAAA 10764 28 100.0 32 ............................ AAATACCCTCGCTTTCAGCATATGCATTCTTA 10824 28 100.0 32 ............................ GAGCACGTGCTTCAAAGAACCTCGGGGCACCC 10884 28 100.0 32 ............................ ACGGTAAGATTTACGAAATGTCTGCTTCGAAG 10944 28 100.0 32 ............................ GATCGAAGACTTTTTAGATGACGAGCCATCAA 11004 28 100.0 32 ............................ TTTTGCTCCAGTTGGACTAATTGCACCAGCAT 11064 28 100.0 32 ............................ TTGGCTCCCCCGGTAGTTTCCGCATTCTGCGA 11124 28 96.4 32 ..................A......... GCGTTCGTCCATTTGGAATACATACCCCCCAT 11184 28 100.0 32 ............................ CAGCTCGGCCAATATCTTGAATATGCTTAACC 11244 28 92.9 0 ........................A..T | T [11264] ========== ====== ====== ====== ============================ ================================= ================== 47 28 99.8 32 GTTCACCATCGTGTAGATGGTTTAGAAG # Left flank : TCCTCGAGCTTTAGGCAGTCATATCTTTGATGCAGATATCCGAGAACTCAGTGAAGACGTCCGCTCACTGGTTGAACATGACGCATTTTTATTCCAGAAAGTACGGTTCTTGCTTGATACTACATCAGGATTTATTAACACCGAACAAAATGACACGATCCGTCGATTCTCGATTTTACCAAGTATGCTGGCACCTCCTATGTTGATCGCCAGTATTTATGGGATGAACACTGAAATATTACCTTTTGCACACGGTCATTGGAGTTTTTATGTGGTTATCACTATTTTAATTGCTTTCTTTATCGGTCCACTCATTTACTTTAGATGGAAGAAATGGATTTAACTCTGATTTTAAAAACCAAGCATCAATGCTTGGTTTTTTCTTAAAAAATATTATCTTTATAATTCAATAAATTAAAACTAACATAAAAAATGATCATATTATGATCATTTCTATGCTATCTTATTGAAATCTGAAGTATCCATTTGAGTTTTTTCGA # Right flank : TTTAATAGGGGAAAAATAATGATACAACAAATTTTAGCTAATATACGAAATGATCTTAATCTCCTTGGAGATGAGACTGTCCGTAAAACATCTCAAAGATTTTTTAAAAAAGATCAAAAAGTGAACTTTTATGGCATAAAAAATGCCGATGTAAAAAAAATCATTAAGAAATATAAAAAACCAGTGCTAATCCTATCGAAAAAACAGATATTGGAACTGTGTGAATCTTTACTAAAAACAAACTATATTGAAGAAGCTGGTATTGCATTTGCATTTACTGAGATGATTGGCGAGCAATTTGAACCATCAGATATTAACCTTTTTGAAAATTGGATTAATTTATATATAAACAATTGGGCTACTTGCGATACGTTATGTAACCATACGATTGGAAATTTTATCATCCAGTATCCTGAACTTATATCAGAACTCAAAAAGTGGACAAATTCATCAAACCGCTGGATGAAACGCGCTGCTGCTGTTTCCCTTATTATTCCAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCATCGTGTAGATGGTTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACCATCGTGTAGATGGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //