Array 1 201795-202886 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP021772.1 Streptococcus agalactiae strain B111 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
    201795	    36	 100.0	    30	....................................	GTGTAATAACCAACCATTAAAAAGCCATCT	
    201861	    36	 100.0	    30	....................................	AGTTAAATTCACAATTTTGGTCTTTTTCGT	
    201927	    36	 100.0	    30	....................................	CAATAGCATCTATGATGATGCCGTCTACTA	
    201993	    36	 100.0	    30	....................................	ACTGATTAACTACAGCCTCTTCTTTTGTTT	
    202059	    36	 100.0	    30	....................................	TGGATTTAAAGCATACGGTTTCAAATCGTC	
    202125	    36	 100.0	    30	....................................	AAAAGTATATTGTTTCATCATTTCCCACTT	
    202191	    36	 100.0	    30	....................................	AGTTCCTAATTGAAAATCATGTAGCAATCT	
    202257	    36	 100.0	    30	....................................	GATGAGTCTGATTGAAGCGTTGGAAGTTTT	
    202323	    36	 100.0	    30	....................................	GGAACGAACGGTTAAGCCTTTCAACGCTTC	
    202389	    36	 100.0	    30	....................................	CACTGACCACCTCTGAACAACCATTCATCA	
    202455	    36	 100.0	    30	....................................	AATTCTGCTTTGAAATCAAGTTCCATTTCT	
    202521	    36	 100.0	    30	....................................	TGCTCCAAACGGGCATTTTCAGCTTTTAGT	
    202587	    36	 100.0	    30	....................................	TGAATAAATAAGCTACAAAAGATAGGATTG	
    202653	    36	 100.0	    30	....................................	TTTCCACTCGTCTAACCAGGCTATGAAGGT	
    202719	    36	 100.0	    30	....................................	CCTCTAGTGGCTGAAATAACCACTACTGAG	
    202785	    36	 100.0	    30	....................................	AAAAAATTAATGACGCAATTGCTAAGTCAA	
    202851	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
        17	    36	 100.0	    30	GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC	                              	       

# Left flank :   CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG
# Right flank :  CACAGACTTTAGATTTTTATGAAAAAAATGTGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:58.33%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-4.70,-0.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [56.7-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.27   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
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