Array 1 42043-40230 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXCO010000023.1 Prevotella histicola strain SCHI0027.S.7 NODE_23_length_42070_cov_84.518301, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 42042 47 100.0 30 ............................................... ATTCGTGCCGGGTATAGGTATCTCCACAAA 41965 47 100.0 30 ............................................... TATCACTTCGCATGAAATTACGTATAGTTG 41888 47 100.0 29 ............................................... CATTGAACGAGCGAACATCGGAAGGTGTC 41812 47 100.0 30 ............................................... CTTAACCTCGTCGTAGACATTACGAAGATT 41735 47 100.0 30 ............................................... AGAAAAACCACCGTTAAGCATAGAAGTTGA 41658 47 100.0 30 ............................................... AGGAGGTTCAGAAGAAATTATAACGTCTTT 41581 47 100.0 30 ............................................... GTGAAGTTGTCGTCATCAAAGCGTTTGTTT 41504 47 100.0 30 ............................................... TAAAGAGAAAAAATACAAAGAGTTCTATGT 41427 47 100.0 29 ............................................... GGGTATTAAAGTATTCGTGAGTGAGCGTG 41351 47 100.0 29 ............................................... GCGGAAGAAGCGTTTGAAGAAGCAGCGGA 41275 47 100.0 29 ............................................... TCAGCTTTACCTAATTCTCGAACTGCAAG 41199 47 100.0 30 ............................................... TACCGACCAAATAATCATATGTTTTCTCGG 41122 47 100.0 30 ............................................... TGGTCCACTTGCATAGACAAGCATGTTTGA 41045 47 100.0 30 ............................................... GTCACTTAACTTATCGAAACGAATACCAGT 40968 47 100.0 30 ............................................... TGTTTCATCCTCAACTGCAAATGAAACATT 40891 47 100.0 30 ............................................... AAGAGGGTTATCATTGAGATAATCAAGTGA 40814 47 100.0 30 ............................................... AGAGAAACCTCCATTTAACATAGAAGTAGA 40737 47 100.0 30 ............................................... ATAATCATCATAAGGAGGAAGAGCAACAGG 40660 47 100.0 30 ............................................... TTTACGTGAAGGTGAACACTTTGGGTGGGG 40583 47 100.0 30 ............................................... GTATTAGCATTTTGTTGGTCAATACCAATG 40506 47 100.0 30 ............................................... ACAAAATCACGATAGCGGTCAAGTTCTACA 40429 47 100.0 30 ............................................... TTCTCATCGGCAAACTGCTGCACACGATCG 40352 47 100.0 29 ............................................... GTATAATAGATAATATATCATCATCCGTT 40276 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 24 47 100.0 30 GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Left flank : GGCTCAAATACGGGTGTAAAAATGTTC # Right flank : TGAAGTAGCGTAAGAAGTTGGTTATCAACACCGTAACACCTACTTTGAGAAAAGAAAAAATGCAAGTAAAAATAAAGTTCCACCATTAGAAGTGGAACTTTATTTATTTCTAAAACAACTCTAATTGAACTCCAGGAGCATTTGGCTTATGCGGTTTCTTGCCATAAAAAAGTTTAATTTCTTCAAACTGTTTATCAGTTATACTCATTATTCCAACTTTCCCATACACAGGAATAATGGTTGACACCCTCTTAATATGCACTTCCATGTTTTCCTTACTACCACAATGGCGTATGTAAATAGAGAACTGGAACATTGTAAATCCGTCTTTTAGCAAGTTCTGACGAAAGAGTGCGGCAGCCTTTCTCTCCTTCTTTGTATCTGTGGGTAAGTCAAAAAATACCATTAACCACATACTCCTATATTGACTAAATCTATAAGTTTCCACTGAAGGGGATTATAAATCAGGATACAATATTCTTCTTTGCTCACCATTAAAG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTAAAATTAGTATCTTTGCATTATCAGACACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.90,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA // Array 1 1-432 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXCO010000035.1 Prevotella histicola strain SCHI0027.S.7 NODE_35_length_15716_cov_83.476373, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================================ ============================= ================== 1 48 100.0 29 ................................................ AGAACATTTTTACACCCGTATTTGAGCCA 78 48 100.0 29 ................................................ GCCTGCGTTCTTTACTGATAAGTAATCGA 155 48 97.9 28 C............................................... CCACTTACTGTTTCCAAAGCCATCATAA 231 48 100.0 29 ................................................ TGTCATTGTCTGTTCTGCTTCTTCGTGAG 308 48 100.0 29 ................................................ AGCTGCTCGATATAACGGAAAAGGTGCTC 385 48 95.8 0 ......................................G........T | ========== ====== ====== ====== ================================================ ============================= ================== 6 48 98.9 29 TGTTGTGTCTGATAATGCAAAGATACTAATTTTAAAGCAAATCACAAC # Left flank : | # Right flank : TGGGCTTTTTGATGCTAATTAACTTTAAAAAGATATTTAGATTTTGAAGTTTAATATTAATTATATACCTTTGCATTAGATCATAAGAATATGGTTTAGGGACAGGGTCGAAAGATCGTGTACCATCAAGGGGCGCTCTAAGCGTCCCACTTTTTTATGTTTTTCTTATCCCCCTTTCCTTTTTTACGTAGTGGTAGATTTGTTCTATTATATATAATTATTGTTGTTGCTACCACAAAGGTACGTATTTTCAAGCGAATCACAACAGTCTTTTTAATGCTAATTAATTTTAAAAAGAGATTTAGATTTTGAAGTTTAATATTAATTATATACCTTTGCATCAGATCATAATGATATGGTTTAGGGACAGGGTCGAAAGATCGTGTACCACCCCAAGGTCGTTCTTTAGCGGCCTTATTTTTTTATGTTTTTCTTATCCCCCTTTTCTTCTTTTACGTAGTGGTAGATTTGTTCTACTATATATAATTATTGTTATTGCT # Questionable array : NO Score: 2.71 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:-0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGTTGTGTCTGATAATGCAAAGATACTAATTTTAAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.83%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //