Array 1 150912-151474 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDDB01000004.1 Liquorilactobacillus nagelii strain TMW11823 Lactobacillus_nagelii_TMW11823_seq4, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 150912 30 100.0 36 .............................. CGACATGGGTCGAGTCAGGTTTGACTTTACTGATGG 150978 30 100.0 38 .............................. GACAATTACAAGTTTATTGTTCCAACAGATAAAAAAGC 151046 30 100.0 36 .............................. TGAATTATGATGTCAATAAAAAACAGTCACAAAGCT 151112 30 100.0 37 .............................. ACTAAAATGACGATTCAAAGCAACAAAATGATTTTAG 151179 30 100.0 36 .............................. TAGACTTCATATCGTTATGAATAACGGTTTGATCGT 151245 30 100.0 38 .............................. TTAGCTCGAAGTATCAAATATGAAGTAGTTGAAAAAGA 151313 30 100.0 36 .............................. AATGTTTTGGTACGACAAGCAAGAAAAACATACGAC 151379 30 100.0 36 .............................. AACTAAATAATAAGACAATTAATTCAATTATTTACC 151445 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 9 30 100.0 37 GATTCTATTTAACTTAAGAGGAATGTAAAG # Left flank : TCAACCTTTTAAATTATGGTGGTGATTTTAGTTGTATATAATATTAGTTTACGACATTGCTTTAGATCAGAATGGAGCTAAAGTTTTGAGACATGTTTTTAAAATTTGCAAAAAATATCTGAGCCATGTGCAAAAATCGGTTTTTGAAGGGGAACTTACCAAGTCACAATTACAAAAATTGACTACGGAGTTGGATAAATGGGTCAGAAATGATAAAGATTCGATAATTATTTTTAAAAATCGAAACAAAAATTGGCTTGATAAAAAATTTATTGGCCTAGATATGTCTGATGAAACATCAAATTTTTTTTGAATTTAACTTGTCTGTCGACCTCAAATAGTTCAAATCTATGGGGGGACTGACAGAGAAGATGAAGCTTAATTTATTAGGCTTGAAAGAAAATATGGGAAAAGGTAATATTTAAATATAGACAATAGGTGAGATGGTCGACAGAATGTAGATGAAAAGTATTGATTTTATAGGGATTTCAATGTATATG # Right flank : GTAGAAATAGTCGTGCCTTCGACTAAAACGTTTAGAGATTTGGATCTGAGTCAAGTTTTTAGACACGATTACGTAGAATTTCTAACTGACTAATTGTTCCTTTTCATCTGGAGTTAAATAGCCATCGGCACTAATGATCCGCCGAGAATTATAAAATCCTTCAATGTAACTAAACTGAGCCAAATTGGCTTCATGATAGTCTTTGTAAGTCCGTTGGTAAACCTCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCTATTTAACTTAAGAGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 393-1478 **** Predicted by CRISPRDetect 2.4 *** >NZ_PDDB01000010.1 Liquorilactobacillus nagelii strain TMW11823 Lactobacillus_nagelii_TMW11823_seq10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 393 30 96.7 36 A............................. GCAGAATAGGCGAATTATATGGCCTAGTTTATGAGG 459 30 100.0 37 .............................. GAAAAACACTAGTGATTGAAAAAGATGATGAAACCAT 526 30 100.0 35 .............................. GAATACTTTGTTGCCTAATGGGTCATCATTCATCG 591 30 100.0 35 .............................. TTATTTTCACCTCTTTTCAAAATTAATTTTAGCAT 656 30 100.0 35 .............................. TTTGCCCCGCCAGTAACAGTTGTGCTTGAGCCAGC 721 30 100.0 37 .............................. GTTGGTAAGTCATCTGAACCTAATCGTTCAGTAATCA 788 30 100.0 38 .............................. CTTGGCCTTTATCCGCCCATGCTTCTTTCATCGGGTCA 856 30 100.0 33 .............................. AATCAATACCGACGTAGTACGTTAAATCATCAG 919 30 100.0 37 .............................. GCTTCCTACCGCAAACTGGGCAGTAATGGATGATTGC 986 30 100.0 36 .............................. TAAAATCTTTGAAATCTTTAGGCGTCTTAATTTCAA 1052 30 100.0 36 .............................. TTTGAAAACACAATTGTTTTATCCATTTTTCATTTT 1118 30 100.0 37 .............................. AACTCATCAAGCGTATCGTCAATTGCTTTCTGATTGG 1185 30 100.0 37 .............................. ACTGCCAGTTTTGAGTGCATGGTCTACAGCTGGGGTT 1252 30 100.0 37 .............................. TCAAAAGTAAGATATACTCCAAATCTTTTTTCAAACT 1319 30 100.0 35 .............................. AGATTTTTCTAATGGCGGTAAACCCCAAGGAACAC 1384 30 96.7 35 .............................T GTGGCAACTGGAGCAAAACGGTAGAGGCAGAAACT 1449 30 93.3 0 ............................GT | ========== ====== ====== ====== ============================== ====================================== ================== 17 30 99.2 36 GATTCTATTTAACTTAAGAGGAATGTAAAG # Left flank : TCTGACAGACTTCTTTAACGCTATGCGCTGATGCCGTTACTTTAATAGCTGACTGCCAATCTTTGATACTTACTTTTTTGCGAATATGGTTAATGCTTTTTTTAGGATATCGTTTTCACTTTCCAGCTTGGTAATTCTTGCCTGCATTTCTAACAAGTCGGACTTGGAGACCCCGGTATCATTATCTTTCTTGTACAAATCATTCCATTTATAAATGGTGGCACTGGCGATCCCATATTCGCTGGTAAGATCAGTGACTGATGTCCCGCTTTCATACAGCTGAACGATCATTTTCTTGAATTCGACAGAATATATCTTTCTTTTGCTCATAAGACACGATCCTCTCTAGTAGAAATTCTATCAAATCGTGTCTACACTTTCATCCTAAGTCCA # Right flank : TTATACTACCTGCAGGTTGAGTAATTCTTGCTCCCATATTTCTTATAAATTCTAACCAAAATGCCGATTAATATTCTGCTGATACCATATTTTCTCGTAATCACAGCCTTAACTTCAGCGTCATTAAGGTACTCTTTGACTGCTATAGTTTTATTCTCAATACTACTTTTGTCATAATAAATACCCCTAAAGTCGAAACGTAACTTTAGGGGTAAAATTTAATTTTCTGATTTAAAAATCAAAAATAAGGTTCTAGATCATTAGATTAAAGCTTTAAGTACGTGTTTTTTACACTGCACTTAGTCAAAAGGATATTTCATACCCCAAGCATTTCTTACACTATCTAGAATATGAGCAACGTCGCGTGAAATTGCCAGCTGACCGTCATCATGTCCATTAGCAATATAACGTTGCATATCGCGAACCTCATATCGTAAAGCCTGCGTACCATCACCGGAGCTCAAAGTCTCTGTAGTTTGGTCATGGGCATCTGCAGTATA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTCTATTTAACTTAAGAGGAATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //