Array 1 705976-705280 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMJH01000009.1 Acidovorax sp. Root275 contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 705975 36 97.2 30 ................................C... GGCCCAGGCCCTGCTCAGGCTGGCGCCTGT 705909 36 100.0 30 .................................... TGGCATCCGCATCACGCACCTCCTTGCTTG 705843 36 100.0 30 .................................... CATCACAGCTCCTTTGCCTCAGATGCGGGA 705777 36 100.0 30 .................................... CTGCATGCGCGAGGGCCACGTGTCACCCTT 705711 36 100.0 30 .................................... GGCGGCCCCCGACTTACTGACGCCGCTGAA 705645 36 100.0 30 .................................... GCTTGCTGTAGAGCCGAAAAAACGTTTTGA 705579 36 100.0 30 .................................... CAACGCAATCAAGGCTTCGCGCTCTACCTG 705513 36 100.0 30 .................................... TCCAGCGCCGCCCCGGCTGGTGCTTGCCCA 705447 36 100.0 30 .................................... CACAACGGAGAACGACATGAAAAGAATGAT 705381 36 100.0 30 .................................... AATGGGCTGCGTGCCGATGGGAGCGTTTGC 705315 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 11 36 99.7 30 GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGACT # Left flank : CGTACAAGGGGACGAAGTCGAGCGGGCAAGGAACAAGTCATGGCAGAAGTCGGGCGTTTCAACGGAAGTTGGCGGGCACTATGCGCTGCTCAATGTACTGCCACAGTAAGCCGTGTAAGCCTTGGCTGCACTGCCGTCGTGGGCGTCGATCATCGCCTGGCGCTTGTCGGCATCAGCCACGTGGTTTTTCAGCAGGCCTTCAGCGCGCGCATCGGTCAGCGTGCCTTTGAGGATTTGCGCGGCACCATTCGCCCCCTCGTGGTGGACCAGATAGATGTACTGCGCTTTCTTGTCTGCGGGCAGATCGGCAGGCACCAGAGGGGTGCCATCGTCGTTGGTGCGGGCGCTCAGCTGGGTGAAGTAACCCTTGTCCAGCTCAGCCGCAGCCACGATGGAGGTGGTGGCGTCAAAGCGCAAGTCCAGCAGCGCAGCCCGGTCCACCACCTGGTTGGCATCGTTCACCTGCTCCAGGGACTTGGCCTGTTCATTGACGTAGCTGC # Right flank : CTGATCGCGATAACCCCTTGATTCGTCAAGGGGGTTTTCGCTTCTGCAGTCCAGGAAAACATGGCGTAGGGCTAGAAAAGATCGAACTGGTCGGGCGCTTTTTGCGCGGGCTGACGGCTTCGGCCATGGAAGGAGATGGCGCGCTCGTACTGCTTGTCGGTGAACTGGAAGATATGCACTTTGCCTCCGGCCGGCAAGGCTTGCTCCACCTGACGGCAGAGTGTGTCCACCTGGGCCTGGCTGGTGCAAAAGCGCAGATAGATGCTGAACTGGCTCATCTGGAAGCCCACGTCCAGCAAGGCATTGCGAAAGCCAGTGGCCGCCTTGCGCTCGGCCTTGGTGATCACTGGCAGGTCGAACATCACCACCATCCACATCAGTCGGTACCCCGTCAGCATGGTTGCAATCCTGTTGGCATGCGTCCGTTCGGCGTCACTTCAATCGGAATCGAAGCTGCCTGCCAGTGAGAGCGGCAATCCGGGCAGGGGCAGATCGAGCCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCCGGCCAGTGCGCATATCCCAGTGATCTAGAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.20,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //