Array 1 59503-58545 **** Predicted by CRISPRDetect 2.4 *** >NZ_RQVC01000013.1 Veillonella sp. CHU732 contig_0013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 59502 36 97.2 30 ............C....................... CCTAATGCTGCAACTACTGTTACTACTAGA 59436 36 94.4 30 ................G...............G... CTCATACTGGTAACGTAATGGCAAATGGTG 59370 36 100.0 30 .................................... TATTTGCCTTCACGAGTAATGTATTCCATA 59304 36 100.0 30 .................................... ATGGTGTCGGCATCTTGCGGTAGTACCTCA 59238 36 100.0 30 .................................... TTCGAAGAAGAGCCCTGATCTTGTACCCTC 59172 36 100.0 30 .................................... ATCACACCCATATCTACGACATGCTCATGA 59106 36 91.7 30 ............A........A......C....... CGAACGCAAGAAAATTAAAGCACAAGCGCT 59040 36 97.2 30 ...............T.................... TGTGGGGCAAGGGCAAGAATTGTGGGTCGG 58974 36 94.4 30 ........A....A...................... CTGTGCAGAAGTCCGCCAATACTTCCGTAA 58908 36 94.4 30 ..........G................A........ GGCTCTACCATAGTTTTCCCCTAATACGTT 58842 36 91.7 30 ................G..........A....G... TTCCCATATGATTTTGGCTTGGTCACGTTT 58776 36 94.4 30 ...............G...........A........ CAAATAGTATAATTTTGTTAAGGAGCAGGG 58710 36 100.0 30 .................................... TATCGGTTCCTGCCGATACAACAGTGGGAG 58644 36 97.2 29 .C.................................. TGATATGTACGTCCAAAAAATATGTGACG 58579 35 77.8 0 .C.....T.....A.GG..........A..G-.... | ========== ====== ====== ====== ==================================== ============================== ================== 15 36 95.4 30 GTTTGAGAGTAGTGTAATTCTGTAAATGTCTCAAAC # Left flank : TAAAAGCTAAGGTAAAAGCTGTATTTTCAGCAAGTTTCTATTAGTGAATGGCTTTATTATGTTACAAGAATCGGTGTATGTGAAACTGGTGTTAAATACGACAAGTGTTAAATTGTTAGAGAAACAACTTCGAGAACATAAGCCTGTAGAGGGGAATATTTGTTTACTAACAGTGACAGAAAAGCAATATTCTAAAATGGAAATACTGACTGGAGAAGTGCAGTCGGAAGTTTTAGATACAACAGAGAGAGTAATTTAATGATGGAAGAGTTGCACGATACGGTGTCTAAATTACATCAATTTTTAACACTATATTAGCAAAACAGTTATGCATTCTATGCATATCATCTGGCGCATATAGACTGCATGATATTGATAAATCTTTAATTAATGGGTATACTTTAGATAGTGACTTTTGTTTGATATAACGGTATTTACAGGATTACACTTGGTGGTGACTGGACAAGCTTTGGAACTTTGGACTCGTATTTGGGGTTGGG # Right flank : TGTAATTCCTATATTCTTGATGTATAGTAAGTCATGTTTCTAAATTGAATAAAGAAATGGATAGATTAGTCTGTGAATGCCACGGTCTAATCTTTTTTATATAGTATAGAATCATAAACTTGCTACCGCCTTTTTATCACTTCTTTTTGACTATTACTTGCTAGTAGGCTATAATAATCTAGATACATAGTCTTTAATTGAAACTTTCCACATATAAGGAGTTGAGATAGTTGTTAGGTTTTATACAAAAACTATTGGGCAATAAAAATGCAAAAGAAATTAAACGGATTCGATCCATTGTTGAAGAGATTAATGGATTGGAACCAGAATTGTTATCGTTAAGTGATACTTCTTTACGCGCAAAGACAGAAGAGTTCAAAGCAAGATTGGCGAATGGTGAAACATTAGATGATATTTTACCAGAAGCATTTGCTGTGGTTCGTGAAGCATCCAAACGTGTATTGGGTATGCGCCACTTTGACGTGCAAATGATTGGTGGT # Questionable array : NO Score: 2.54 # Score Detail : 1:0, 2:0, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.51, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTAATTCTGTAAATGTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //