Array 1 1857002-1866157 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058557.1 Alkaliphilus sp. B6464 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================================= ================== 1857002 30 100.0 35 .............................. TTAGTGACTTAAACCACTCCATCGGATATCCTAGA 1857067 30 100.0 35 .............................. TCATCTATTTTACAAGGTACTTTATCCCATCCTAA 1857132 30 100.0 36 .............................. GACGTAGGGTTTAAATAATCAAGTAACTCTAAGAAT 1857198 30 100.0 36 .............................. GTAAGCAAAGTAACAGGTTTATCAACAACAGGCTTA 1857264 30 100.0 35 .............................. ATAATTTTTTCGTTATGACTCTCTAAAACAGAAGT 1857329 30 100.0 36 .............................. AGGATATTCAAGATAAAAAGATAGATACCCTATTTG 1857395 30 100.0 35 .............................. TTTTTATATCCTAATCATTTATAAAATAATAATGA 1857460 30 100.0 36 .............................. TCTTGTAATCTCCGTTCCATACCTAAACTTAGTCCT 1857526 30 100.0 34 .............................. GTAGCAAACTCAGATAGACCAGATTGAAAAACAT 1857590 30 100.0 34 .............................. GAAGATTTAAAATTAAAACTATTAGTACCAGTAA 1857654 30 100.0 36 .............................. TCCGTTATTAGATGCTATTGACTTTCAAAATGCGGG 1857720 30 100.0 35 .............................. ACAGTTACATCTACCTTATCTGTAGGCTTAAATCC 1857785 30 100.0 36 .............................. CCATATTTCTTATCACCTCTTTCAAGCCCATAATAA 1857851 30 100.0 35 .............................. TTCATATTGCTTGATGTTACTAACTTAAAACCTAC 1857916 30 100.0 36 .............................. CTTGAAGGTATGACGGAAATTGAAAAGACTAATGTA 1857982 30 100.0 34 .............................. AGATCATCTAAAACTATTACTAATTTGCTTTGTG 1858046 30 100.0 36 .............................. GAGATGCAATAAATAATAATATGAGAGCACTTACTT 1858112 30 100.0 36 .............................. ATAGAAAAATGTTAAGGCATACAGAGGATGGAGCTG 1858178 30 100.0 35 .............................. TTTTTCTATTACACATACCACAAGTTATAATCCCA 1858243 30 100.0 36 .............................. ACCAGCAGGTGGCAAAATGCTAACAGAAATGTATGG 1858309 30 100.0 36 .............................. GAACCTTACTAGCTGATGAAATAGAGTGTAGAGTCC 1858375 30 100.0 35 .............................. AATAGACCTAGCTATAGTTTACTATAACAAGCAAG 1858440 30 100.0 37 .............................. GAAGAAATAGAAATGTTAGAAAAACATGGCAGGGTTA 1858507 30 100.0 36 .............................. ACGCTTACACAGTATTAGTTTTAGCTGAGAAGAAAA 1858573 30 100.0 36 .............................. AGTAAAACACCCCTTTTTATTAATTAACACCCGGTA 1858639 30 100.0 35 .............................. TAAATTATTTTAATCATATAGTCACTTGCGGATGT 1858704 30 100.0 36 .............................. TGTAAGATGTTGTTACAAGTGGTACATAACATAATG 1858770 30 100.0 36 .............................. AATATAGAATGGGCTTCTTTTTCTTCTTCTGTATTA 1858836 30 100.0 35 .............................. TTATTGTTAGGTGTTAGGTCTTTGTTAGGTGTTTG 1858901 30 100.0 35 .............................. TATTTACACCTCCCTAGTATCCATCCACTTGTCTT 1858966 30 100.0 36 .............................. CCAAACTACACACCTGCCTTTACAAATCTATATTCT 1859032 30 100.0 36 .............................. AATTTTTCGGCTATATTACCAACGATTAGAGCCATT 1859098 30 100.0 36 .............................. AAGGTATAGGTTCTATTTAAAATAAGAGGCACCCAA 1859164 30 100.0 35 .............................. ACTTTTTGGCTTATAACGATATTTGCACCAAAGCC 1859229 30 100.0 35 .............................. GCACTAGGCAATAAATTTAGAACTCCTAAAAAAAC 1859294 30 100.0 35 .............................. ACTTTTTGGCTTATAACGATATTTGCACCAAAGCC 1859359 30 100.0 34 .............................. TATAATATAATACGTAGTACAAAAAGGAAGGGGT 1859423 30 100.0 35 .............................. TTCTATTCAAACTGCTGCTAGATGGATGGCTAATG 1859488 30 100.0 34 .............................. AGTTATGGTTGACGATGCTAGAAAAGGTGTATCT 1859552 30 100.0 35 .............................. GCTATTGGTATGGTTAATGCACGAAATACAACCCA 1859617 30 100.0 35 .............................. ATAAAAATGGGATTACCTAACATGTTTAGTCCCTC 1859682 30 100.0 36 .............................. TACCTAATTGGAGCGCTTTAACTGCTAAAAATACAT 1859748 30 100.0 36 .............................. TGTCTAGCATTTACTTAGCCCCCTCGTACATTTCCC 1859814 30 100.0 34 .............................. ATCTTGGTAAATATTACTACCCTCTTTAGGGTAG 1859878 30 100.0 37 .............................. GCGATGCTTAAGGTTGATATAGATACTATTTACGAAA 1859945 30 100.0 35 .............................. TTTATCTTCCTCCTTTATTTATTCTGTGCAACATC 1860010 30 100.0 37 .............................. GAGTGTTAAATTTAACATGACAGGTGGAAATATTCAC 1860077 30 100.0 34 .............................. GATACGATTGCAGACTATGAAAAAGCATATTTTG 1860141 30 100.0 35 .............................. GAATATAGAAGGTTTAGATAGAATTAGAGAACAAA 1860206 30 100.0 37 .............................. ATTACAAAGTCAACATTCTCCCTAATTTGAATAACCA 1860273 30 100.0 35 .............................. CCATAGATTTTAAAGACAGTATCGGGCCTAACTTC 1860338 30 100.0 36 .............................. TCAAAAGAAGGAAAAGCTGATGAAATAGAGCAACAA 1860404 30 100.0 36 .............................. ACTAGCTCTAAATTAACTTGACTTATCCAACCATCA 1860470 30 100.0 34 .............................. TTAATTCATGTTCCAGTATTTCTGCATATAATGG 1860534 30 100.0 36 .............................. TTTGTTTCAGCATTAAAATATTCCTCGCCACATTCA 1860600 30 100.0 36 .............................. AAATATTAGGTTATAACAATACCTTTAGACCATAAA 1860666 30 100.0 36 .............................. GTACCAGGGTTAGGGTTCTCTCCTGGATTAGGGTTC 1860732 30 100.0 35 .............................. TCTAAAACAGAAGTTAAATTAACACCTGATAGATT 1860797 30 100.0 37 .............................. CAGGGAATATGAGGTGCTTATTTTAGTAGAAATTAAG 1860864 30 100.0 36 .............................. ATTTATCCGGTACTCCTACATCCATTCTGGCAGCAT 1860930 30 100.0 34 .............................. TTTCTACAAAATCCGAAAATACCTTCCATGTGCT 1860994 30 100.0 36 .............................. TTAAAACAATACATATAATAAGATTAAGAAACAAAC 1861060 30 100.0 34 .............................. AAGAAGTTAAGCAAAATAAAGATGTTGTTGCTAT 1861124 30 100.0 35 .............................. GCCAGTTGATGATGTTATTTGGTATGATGTATATT 1861189 30 100.0 35 .............................. TTTATAACAGATTTAAATCTACATCACGATAACTT 1861254 30 100.0 37 .............................. AAGATATAGAAATCTTGATTTTTTTCTGTTGTTCTGG 1861321 30 100.0 35 .............................. GACATGATTATATACGACACTGTAAGATATGAAAA 1861386 30 100.0 37 .............................. GAAGTTAAATAAAACACCTTAGTATTTTCACCATTAA 1861453 30 100.0 35 .............................. TTCTGCCATTTTGGTGGTGGGTTGTTTCCTTCGCC 1861518 30 100.0 33 .............................. ACTATAAGAATATAGGTATGTTCTGCTTTTCTA 1861581 30 100.0 36 .............................. TCTCCTGCTACAGCTGGATTAGGCATAAGAGTAGCT 1861647 30 100.0 34 .............................. AATCTGAGATAATGTCAGATAAGTATTGATTCTC 1861711 30 100.0 36 .............................. TGTGCAGAACTACATAAGCTAGGTATATACACCATA 1861777 30 100.0 36 .............................. ATCTTATGAAAAGGATTATATTCAACTAGTTTCTCA 1861843 30 100.0 36 .............................. TCAGTTCGACAGTAAAATACCAAATTCGACTATTTT 1861909 30 100.0 37 .............................. TTTTTATTTTTTGAGCTAACCATCTTACACTTCTTCC 1861976 30 100.0 36 .............................. CCTTAATTAAATCTATTTCTCTAAAGCCCGTCCATC 1862042 30 100.0 34 .............................. TCTACTACAAATATACTAGTTTCAGTGGCTTCGG 1862106 30 100.0 36 .............................. TTCAGCAGTCCTAATAATTATAGGGTATGGGATATT 1862172 30 100.0 35 .............................. AAATCTTTGTCAGATAAGAAGTCATCCTGCCAACG 1862237 30 100.0 34 .............................. TCTGGCAACAGTCCAGATTTGTCGGTCATTTCAG 1862301 30 100.0 35 .............................. TTGCATACATTATTCTACTTTGAATCTCTTTTTCT 1862366 30 100.0 34 .............................. GACGTACTTACAGTTAACAATGATACAGAGCCAA 1862430 30 100.0 35 .............................. TTACAGATGGAGAGAACTTTGATAAAAAAGAAGCA 1862495 30 100.0 36 .............................. AATTTATTATCATTAATTGGAGTGATTTCATTGTAA 1862561 30 100.0 37 .............................. AGTGGTTCTCGTTATATAGATGAATTATATGGTTATC 1862628 30 100.0 37 .............................. TCTACTATCTTCCACTTTCTTTTCTGAAGGGCTCCCC 1862695 30 100.0 35 .............................. TAATACTTAGGGGGAGTACTACTTAGGGGGATAAA 1862760 30 100.0 34 .............................. CTCTTCACTTGACATCTTGTCTCCATCAGAAATC 1862824 30 100.0 36 .............................. CACATATATTGACCTCCTTTTAGTTACTCATGATTT 1862890 30 100.0 36 .............................. TCCGGAATCAAAGCTATCTCTAATGTTCCTTCATAT 1862956 30 100.0 37 .............................. TTAAATTGACTAGGAATGTTATAAGGGGGTAGTTCTA 1863023 30 100.0 36 .............................. CCATGAACATTCGGGACAGTAAGGGTTATAAGATAA 1863089 30 100.0 36 .............................. TAGATGAATTGCATTTTTTACATCGAATTATACCGC 1863155 30 100.0 36 .............................. TAACAATATATTGTGTTTTGGGAGCATCCACATAAT 1863221 30 100.0 37 .............................. CTTTTACCATTTATTCTAATTGCATTCCTTTTAATAT 1863288 30 100.0 34 .............................. GAGAGTTCTACAAAGAGATAAAGGATGAAGTTAG 1863352 30 96.7 36 ...............T.............. AGAACCTATAGAAAAGGAGGCACAGGAGCAGAAATC 1863418 30 100.0 36 .............................. TTGTCTTTAGTTTGGGATTTGCTTTCTTTCTTGCCC 1863484 30 100.0 37 .............................. ATTATAGTCGAATATAGACCTAAAAATGATGAAATAA 1863551 30 100.0 36 .............................. TTAGAATATAATATAAAATTCATAAAATTACTATCA 1863617 30 100.0 36 .............................. GTCTGCTGTTGAGTTAAATCTTCATTAACCTTATGA 1863683 30 100.0 34 .............................. AAATCATAAATATATGTTTTTTCAATTACTGTAG 1863747 30 100.0 35 .............................. TTGGGTAGGCTATATCGTGTATAGACTGTGCAGTA 1863812 30 100.0 35 .............................. TGGGCAACTTTTCCATTAACTCATTCGCCGCATTT 1863877 30 100.0 37 .............................. ATCCCTGCAAAAAAATATGGAATAACAACAGGTGAAC 1863944 30 100.0 35 .............................. AGGCTGTAAAGGCTCTATTAGACTTAGACAAGGTA 1864009 30 100.0 36 .............................. AGAACAGCAGGATTATTTACTCAATGGGTATTTGGT 1864075 30 100.0 36 .............................. TTGTCTACTCTACCAATATAGTAAGTGTAAAAAGTC 1864141 30 100.0 34 .............................. ATCCAGATGGGACGAAAGGGAAGCATGTTTTAGA 1864205 30 100.0 36 .............................. TTTTCAAAATATAAAATAGTATTATAAAGGGTAATA 1864271 30 100.0 35 .............................. CCGGGATTAGGATTTTCTCCCGGATTAGGATTTTC 1864336 30 100.0 37 .............................. TTAATTGAACTATATAGTTTGGAAATTTCTTCTTCGC 1864403 30 100.0 36 .............................. ACATTAAGAGATTATGAAACAAAACATAATGTAAAA 1864469 30 100.0 36 .............................. AACTTGGCAGATGCACGAAGATGCTTCTTTAGAGGG 1864535 30 100.0 36 .............................. GTTAAAAAGTATACATTTTCAATTTGTTCCGCCTTA 1864601 30 100.0 36 .............................. GTTTCCTCTTTCCAGTGTTCTATGATTGCCTTAGGT 1864667 30 100.0 36 .............................. AAATAATAATTATTTATAATAGATTCTTCCATAGAA 1864733 30 100.0 33 .............................. CCTCTTGTTGACTGGTTTGGAGAAAAGGTAGAA 1864796 30 100.0 36 .............................. AACATCAAAATAATAGAAAAAAGATGGAATGAAGTG 1864862 30 100.0 36 .............................. AGTGTTAAGGCCATGAGTGGAGCAACTGGTGAAGAA 1864928 30 100.0 37 .............................. GCACTGTACAAAAATGGGGTAGCTGAAAATAGGGCTA 1864995 30 100.0 36 .............................. ATTGAATACTTATTCATACTTAATTCCCCCTTCTAA 1865061 30 100.0 35 .............................. GAAATTTACTCCAGAATTTCTAATTCAATATGCGA 1865126 30 100.0 34 .............................. TATATCTTGGAATACTTTTTAGAATATGTATAAA 1865190 30 100.0 36 .............................. GTCGGAGCCGGATTAAAATTAGGACTAGGAAATTGG 1865256 30 100.0 35 .............................. AACAATGCAATGTTATATTCCATCCCACCAACTCC 1865321 30 100.0 35 .............................. TATCAAGAGAAATGAGTAAAGAACAAGTAGCAAAA 1865386 30 100.0 38 .............................. ACCTAACTAATCTATATCAAAGTGGCAGGCCTAATACT 1865454 30 100.0 35 .............................. CATAATATTACTAGATGGTTGGCTAGGTTGTATTT 1865519 30 100.0 35 .............................. TAATACTGCTCTTGTTTAATAGAACTGTCATCTCG 1865584 30 100.0 36 .............................. TCGGCTATTATATCTAAGATGTGGTATTTCTTTGAT 1865650 30 100.0 36 .............................. TGGAACAGGTAAAACATATCTGACATCTTGCATAGC 1865716 30 100.0 55 .............................. GAAATAATAACAGGATTAATATACTCTAACTGTGATAATTGAACTATAACGAGTG 1865801 30 100.0 37 .............................. AAGAAAACTTATGAATATGTTTTACAAAGAGCCACAA 1865868 30 100.0 34 .............................. GCTAGTTCATTTAGATCTTCTTGAGCTTCTTGGA 1865932 30 100.0 36 .............................. ATACCAGAACACTTAGATGATGACATAATGTTAAAT 1865998 30 100.0 35 .............................. CTATTTTGGGGTATTGGTCTTGTTACTATTACATT 1866063 30 100.0 35 .............................. GATATTGCCCCTGTCTGCACTGGATTAGATGCATT 1866128 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================================= ================== 140 30 100.0 36 ATTGAACTATAACAAGAGTTGTATTTAAAT # Left flank : ATCTTAAATGAAGATAAATAAAAACTATAATTATAACTATGCATTTGTATTTTATGATGTTAATGAAAAACGAGTAAATAAAGTATTTAAGATATGTAAAAAATATTTGTCCCATTTTCAGAAATCAGTATTTAGAGGTGAGACAACTCCATCTAAATTATTATTACTGAAAAATGATTTAAATAAAATAATAGATGAAAGTGAAGATTTTATATGCATTATAAAACTAATGAATGATAATGTTTATGGAGAAGAAATACTAGGCAGTAAACAAAATGATACAGGAGAAGACCTAATATTATAATAACTTTATAAAAAGATTTAAATTTACCAAGCATTTTTTTGAAACAGTTTATCTGAATACAGATTTTACAACACATTTGGTAACATTGTTATTGAATAATATATTTTTTAAAAACACTTGGTAAAAAAATTAAAAATTATTGATATTATAACGTTTACTGATTTATAATTAAATTTAGAATGGCTAAATTGCTGTG # Right flank : TTTTCCTTTTTCATCCCTAATGAACTTTCTTGTATAATTGAACTATATATTTATGGAGTGTTCTGAGTAAATTAGATAAGTAGAAAGTACGATTTTCTTTAATTTACGTAGTATTTCGTGTCAATAGATAATCTATCAAGATATTTGCATTAATTCAAAAATATGTAACCCGAGAGTATACTTTACCAATTTGAGATAAAGCGTTTTTAAAAACTACGCTGCTAATTTTTGCTTAGAATAATAATCTTTTTTATACTCTTTTGGAGACTTATATCCTAAAGTTGAATGAAGCCTTCTAGGATTGTAGAATAACTCTATATATTCAACTATTGCTATTCTAGCTTCATTTCTAGTTCTAAATCTACGTCCATATAGCTTATCCTTTTTTAAAGATGCAAAAAAAGATGGTTAGACATGTGAATATCTATTAGATAACATAAAAGGAATTTAATAAATAAAAACAGCCAATAATATAATATGACATACTCCATTAATTATTT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACTATAACAAGAGTTGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [78.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //