Array 1 103594-105904 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNOB010000010.1 Eggerthella lenta strain D33t1_170424_B8 NODE_10_length_132247_cov_44.4017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 103594 33 100.0 34 ................................. ATTATCCTCACCGAAGCTGTATCCATCCTGGAGA 103661 33 100.0 34 ................................. CAATTGAAGGAGGAATGAAGTGCGAGGAATAGAC 103728 33 100.0 33 ................................. CGGTCGAGACCGGCGCATTTGATGCTGTCGGTG 103794 33 100.0 33 ................................. TGGATATCATCACAGGTTTCACCGCTGCGGTGG 103860 33 100.0 34 ................................. AAACACTAGCAAGGAGAGTGTACCATGCCCAAGA 103927 33 100.0 34 ................................. CGGTTTGATCTCCGGCATCTCGAATCCCTCCATC 103994 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 104060 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 104126 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 104192 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 104258 33 100.0 34 ................................. TCCAGTATACAGAGCGTTGCGCAAGTTGTCCTGG 104325 33 100.0 33 ................................. CCGTGCTGCGCCCGCCCAATTCCATGAAAAGGC 104391 33 100.0 34 ................................. CAAAACCGAGAGGATGCTCATATCCGACGGCCGC 104458 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 104524 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 104591 33 100.0 35 ................................. TCATATTCATAGATGTTCTCTGGCAGTCCAGGGAG 104659 33 100.0 33 ................................. CACATAGTCACGCCATAATCATCGCGCGAGAGC 104725 33 100.0 33 ................................. TACTTAGTGTGTTATATGCGCCGCAAATACTAT 104791 33 100.0 34 ................................. GGATACGCTCTCATGCATGCATACCCTGTGGCCG 104858 33 100.0 35 ................................. TTGTTGTCGCCGTTCCTCGCGGCAGCCACCTCGGC 104926 33 100.0 33 ................................. CGATGCCGACCACGACGATAGCGCCCATGATGG 104992 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 105057 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 105124 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 105194 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 105260 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 105326 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 105392 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 105462 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 105531 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 105602 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 105668 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 105735 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 105804 32 93.9 34 ..............-.................C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 105870 33 75.8 0 .....GTT.A..T.....C.C..........G. | T,C [105874,105886] ========== ====== ====== ====== ================================= ====================================== ================== 35 33 98.7 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : TCGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //