Array 1 3180-3507 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAEMFG010000045.1 Vibrio cholerae strain Vc516 NODE_45_length_5258_cov_115.186064, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	============================	================================	==================
      3180	    28	 100.0	    32	............................	AAACAGGAAAAACAAGATGCGGCCATCTACGA	
      3240	    28	 100.0	    32	............................	TGATTCAAATTCGGACGTTGTTCAATCTGTTA	
      3300	    28	 100.0	    32	............................	TAAATGAAACTGAGCATTTCTTGCTTGAGTCC	
      3360	    28	 100.0	    32	............................	TATAACTCTGGTCGCCTATATGTTAACGGGCT	
      3420	    28	 100.0	    32	............................	TTGCACCAGCCGATCATGTTTCGGATTTGCTG	
      3480	    28	 100.0	     0	............................	|                               	
==========	======	======	======	============================	================================	==================
         6	    28	 100.0	    32	GTTCACTGCCGCACAGGCAGCTTAGAAA	                                	       

# Left flank :   AGCAAGCAACTTTTCGAACTTTCTGGTGAGGGTACACAACCTATAACGTTAGAGCCTCAGCTAAAAGAAATTGTAGACTTTGTTATTAACGCTACAAAAGATAAGAATTACGAAGAGTTTATAAAACTCGTCTACTCGACATACCCAGTTTTATCTAGTAATAAATATAGCGATTTAGACTTGGTTCAAAAAGCTAGAGAATATAAGGCTCATCTCGTCGCACATTAGAATGCTAACAAAGCATTTAAGTGGGACTCTCAACGCATGGCATTTTTGTCATGCGTTTGTTTTTGTGATTAAGGTGCTATGCATCAATTACGGTTGTGCGTTGTTCGCCCCTTAATGCGGCGTTAACTGGCAATGAAATTACCCATCTTTTTTCGTTGAGTTTTAAGTTATTGATTTATATTGATAATAAATCTAGTAAAAAATAAAAGGTTATTTTGGGAAATTTGATGTAATTACTATTATTAACAATAGGTTACTGCTAAATTTTTATA
# Right flank :  ATATTTATAACTTTGGCATTTGGGATCGGCCAGTTAACAAACGCCTCAAAGGGACTGTCAACGCGTAGCGTTTCCAGTCCCTTTGAACCGCGGTGGTTATGGTTGTTGTATTTAAGTTTAGTGTTAATGCGTTGCCAGCCCCTTAGGCGGGCGTTATGCGATTAAAGGGAATCATCGACTAATGTTGGAAATTGAAAGACTTAATGAATCACATATCAATGCTATTCAAAAAGTGAGCGTTGAAGATGAACAGTTAAGATTTGCTGGTACAGCAGAGGAATTTCTGCAAGACGGCAGTGATACAGCTCATCTCCATGTCATCAAGCATGATGGTTCAATTGTTGGCTTCTTCAAATTGGACATTGCTTACTCAGAAAGTTATCAATTTTGTCCATCTGACGGGCTTGGTTTAAGATTTTTCGTTATAGACAAGTCGCAACAAGGCAAAGGCCTTGGGACGAAAGCGGTAAAAGCATTGTTTGATTATCTGAAAAAGAGCT

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTCACTGCCGCACAGGCAGCTTAGAAA
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [8,6] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-8.00,-7.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [80.0-56.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.51,0.41   Confidence: HIGH] 

# Array family : I-F [Matched known repeat from this family],   
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