Array 1 634-130 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBWL01000127.1 Clostridium sp. C105KSO13 isolate C105KSO131, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= =================================== ================== 633 33 100.0 34 ................................. GTCATGGTGTTAAAAACTGGTGGCACTGTATTGC 566 33 100.0 33 ................................. TTATTGCGGAGGTGGTCTTTTAGACTCTCTTTC 500 33 100.0 35 ................................. CTGTTATATGGAAAACCATCCCTTAAACACGCCGC 432 33 100.0 35 ................................. GTCTGCGTAATAATAGTCCGTTCTGTCCGGCAGAA 364 33 100.0 34 ................................. AGATTATTACCCTCAGGCCAGCACAGTACTGTTA 297 33 100.0 35 ................................. GTTTTGCCGTGCGAAAATATGTACAGTACGGCGGG 229 33 100.0 34 ................................. ATAACAACCTCTCCTAGTATGTACTGATAGCACC 162 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= =================================== ================== 8 33 100.0 34 GTCTTCCTCCGCTTGGAGGAAGTGGATTGAAAC # Left flank : TGGACGAATATCCTCCCTTTCTTTGGAAGTAGGTGATGAAGTGCTTGTGTTGATAACTTATGATGTGAATACAGAAACAGCTGCAGGGAAAAAGCGGCTCCGGAAAGTAGCAAAGCAATGTGTAAATTATGGACAGCGAGTTCAGAATTCAGTCTTTGAATGCAACTTGAATGCGTCCAAATGCCGACAGGTGAAAGCAATCTTGGAAGATATTATTGATAAGAATGTGGATAGTCTACGCCTTTATTATTTGGGGGATCACTATAAAACTAAAATCGAGCATATAGGAGTGAATCCAGGTTTTGACGTAACAGAGCCTCTTATATTTTAGTGCGAATAGGAAGTGCACATGAAAGAGCGGGGGATTCGCACTGAAAAATGAGCCACTTTCTTATATAAAACAATAAATATCGTATCAAAAAATATAGAACGAGTTAAAATATAGTGTGGTTTGCACATATCTATACGCAAGGAAAGTAGAGAATGTGTATAAAATTGCC # Right flank : CATACCTCCCTATTTAGTCAAGTCTTTTTCCTTTAAAATAAAGGATTTTTTGTTATATATCTCAGGTGAATGAGCCATAGTAATGGATATTTTTCTATATCAAGTATGAAAATAGTGATGTTTGGGTACA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCTCCGCTTGGAGGAAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : NA // Array 1 84271-77922 **** Predicted by CRISPRDetect 2.4 *** >NZ_FBWL01000161.1 Clostridium sp. C105KSO13 isolate C105KSO131, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ==================================== ================== 84270 33 100.0 35 ................................. GAGCAATATCTGGGCGCCTGCCTGTAAGATGGCCG 84202 33 100.0 35 ................................. GAGCCGATGCGTATCTCTGGATGCGTGCATGGACC 84134 33 100.0 35 ................................. TCTCTTGCCCATTATCATAGTTCAAGATTTTGTGC 84066 33 100.0 34 ................................. TTTATCGTCAATTGAGAATTGAATCTCGGTTAAT 83999 33 100.0 34 ................................. ATGCGGACATGATGTATCAGTATAATTTTCTTAG 83932 33 100.0 34 ................................. CTCTCTGTCCTGTAGTTCCGCAAAAAGTTGGACT 83865 33 100.0 35 ................................. AGTCCCAGTAAAGATAAACTTGTTCATGTTCCCCG 83797 33 100.0 35 ................................. ATGTCCTCCCGGTCTGGTCTCCGGGAGGGGAAAGG 83729 33 100.0 35 ................................. GCATTACACACGCGTTCTTCCCCCGTGCCGCCGCA 83661 33 100.0 34 ................................. AGTTGTTGCCAGATGCTTGACGATATGGCACTCG 83594 33 100.0 34 ................................. ATCATCTCCGCATCTTTGTACGCTGAACTTGATA 83527 33 100.0 34 ................................. TTGATAAATCCCACTGCGTTATCAAATACACTGC 83460 33 100.0 36 ................................. TCTTTCCCCATGACAAACATGTGAAATGCTTGCTGA 83391 33 100.0 36 ................................. GAATACCCACGGAATAGCACTGGAAGAGGCTAAGGC 83322 33 100.0 34 ................................. ATTGCTCCACCCCTATCCCTATGCTATACTATCT 83255 33 100.0 34 ................................. AGACATTGGAAGACCGCCACGCATAGTAAATAGC 83188 33 100.0 35 ................................. GAACATCCATTGCGTATCCAGTTATCAGCTCATAA 83120 33 100.0 34 ................................. ACGCTAAATCCGCTGTTGATTGTATCATGGAAGT 83053 33 100.0 35 ................................. ACTCCGGGAACTGGGTATATAAGGAGGACTGAAAT 82985 33 100.0 35 ................................. AGAAGTACATCACGAACGTGACCAGCAGTCAGGTT 82917 33 100.0 34 ................................. GTCGGACGGAGGATGTTATCTGGTGGGAGAATCC 82850 33 100.0 33 ................................. ACAATCGGTGTATGGAAAGCAGCAGATTGTATC 82784 33 100.0 35 ................................. ACCGTTTTTCGTAGACCTGTGGGGCGAGACTGAGG 82716 33 100.0 34 ................................. GTACTATCTCCACTCTGACGCTTTTGAGTATTGT 82649 33 100.0 34 ................................. ATAAAGATTGCAAGGACAGGCTGAAAACCATTAA 82582 33 100.0 33 ................................. ACGATAAACAAAAATATGTAGATAACCGTGGAC 82516 33 100.0 34 ................................. GGTTAAAATGGCAAGTATATATATAAAAATGAAA 82449 33 100.0 33 ................................. TCTTCTTTAACTTCTGGTATCCCTCTGCATTCC 82383 33 100.0 33 ................................. TCCGAAGACACAAAAGATATTGCAAAAAAAGAG 82317 33 100.0 34 ................................. GAGAAACTCCCCCGGACAGTACAGAGAGCAGTTG 82250 33 100.0 34 ................................. ACAGAGAATCCATGAAAATAAAAAATAGGAGGTA 82183 33 100.0 36 ................................. GCGAAAAAAGAAAGGAAGATGAACTATGTGGGTAGA 82114 33 100.0 34 ................................. ATACCCGGAATTAGCAAAAGATACCGCTTATGGA 82047 33 100.0 35 ................................. CCCTTGACGATTGTGACAAAGTACAGTTAAAAGCG 81979 33 100.0 35 ................................. CTCCAAAAATGTCAGTCTGGCAAAGGGTAGCAATT 81911 33 100.0 33 ................................. GCCATCCGTCCGTAAGACTGGTTCGTATCAAAA 81845 33 100.0 34 ................................. TCATTAATGCCGCTCACGAACGCACCGACGTAGA 81778 33 100.0 33 ................................. TTGAAACGTCATGAGGAAATTATGTCGGACATT 81712 33 100.0 34 ................................. GTATTTGCAGTGGACAGCATCATAGTAAAATCCT 81645 33 100.0 34 ................................. GACCAGAGAAAAGTCCGTGGAACAAAACATCGAA 81578 33 100.0 34 ................................. GAATATGAAAAAGCCGCAAATAAGGCAGGGTATC 81511 33 100.0 35 ................................. ACATACCCCGAAATACCCCAACATATGCCGACATA 81443 33 100.0 34 ................................. GTGGACTGGAATGGGCGATGCCCTTAAAGGAATC 81376 33 100.0 33 ................................. AAAGTTCTGCAAGTCCTCGTTTACGGTGTCAAC 81310 33 100.0 34 ................................. TGCAGAGACGTTAGTGGAGTGGTTTTACTCCGGG 81243 33 100.0 35 ................................. TTTCCCCGTCAAAGAGCAGCTCAACCGCTCTATCA 81175 33 100.0 34 ................................. GTTGCCGGTGGTGAAGGATGTAATAGGGGATATC 81108 33 100.0 33 ................................. CGACCAGAGATTACAGCCGGGGGATTAACCACC 81042 33 100.0 34 ................................. GCTTACTCCTGTTGGTTGCCCACCACTCACCGTC 80975 33 100.0 33 ................................. TGTAGTCTATAAGGGCGATGGTTTTATCGTTCT 80909 33 100.0 33 ................................. ACAAGAATTAAAGGGCGATTCCGGTGATGCAGA 80843 33 100.0 34 ................................. GCTTGGTGATTATGATTTGAATTAGGAGGTAGAC 80776 33 97.0 35 ..........A...................... GTAAGACGATATCAAACCAAAGACAAAGAATTGCA 80708 33 100.0 34 ................................. GGTATGTGAAGGATATGAGTATCCGGAATATTAT 80641 33 100.0 33 ................................. GACACTGAACTGTTTGGACAAGCGATTGAGAGG 80575 33 100.0 34 ................................. TGTCTGCAAGCAATGCGGGTTAACCGCAGAGGAA 80508 33 100.0 34 ................................. ACAATGCCAATCAAACACAAGAAGTGATGGGTCT 80441 33 100.0 34 ................................. GTAGGAAAGGATGTAGTAGATATCCTAGGATATC 80374 33 100.0 33 ................................. GTTTTCAAATATTTTTTGAGCCATTTCGGCAGT 80308 33 100.0 34 ................................. ACAATCGGTGTATGGAAAGCAGCAGATTGTATCC 80241 33 100.0 35 ................................. TCTTCCCCCGTTGTGAGGTACTCCAGGGATACTCC 80173 33 100.0 34 ................................. AAAGGATATAGCGATTAATGAGTCGGTTGAACTC 80106 33 100.0 34 ................................. AAAGTTGCTACCCGAAGAGGATATATTCCGCTGT 80039 33 100.0 34 ................................. ACAGCCGAGAAAGATGCACATGAAGAGGAGCTAC 79972 33 100.0 36 ................................. TTCCCGCAGTGGTGAAACCTGTACAGATAGTCCACC 79903 33 100.0 36 ................................. AGAACAGGCTATGAGGAACTGAAAGGCTACGAGAAA 79834 33 100.0 36 ................................. ACACAATTATCGCGCACTGGGCATAAGAAAAGCGCC 79765 33 100.0 35 ................................. GATGCATTTTAGGGGGCATACACATGGCAAGTAAA 79697 33 100.0 34 ................................. TGAATCATATAGGGGAGGAGCTATTGTGTACAAC 79630 33 100.0 34 ................................. ACATCCGTTGAGGGTGGAGCGCTTATCCCGGAGG 79563 33 100.0 34 ................................. AACCCGTACAAAGGAAATGTAATCACAGACATGC 79496 33 100.0 34 ................................. GGACAGACGGGGAAAACATGGAGCTTGTGCGAAA 79429 33 100.0 36 ................................. GAAAACAGGGTAATAGAAGTTGAGTATGTGATAAAC 79360 33 100.0 35 ................................. ACCAAAATAAACCATACTTATCCACAACTGTTAAC 79292 33 100.0 33 ................................. TCGGAACAATCATGAAGGAAGACGAAAAGAACA 79226 33 100.0 32 ................................. CATTATGCACTATGTACATACTAATTAAGGTT 79161 33 100.0 34 ................................. AGCACGTAATCCCTCGGGTAAGTCCGTGCCTGGC 79094 33 100.0 34 ................................. AAAATTGGAAAGTCTCTTAAAATACTAGATGATT 79027 33 100.0 35 ................................. TACGCTAAATCCACCGTTGATTGTATCATGGGAGT 78959 33 100.0 34 ................................. TCTAAAGCACTTGTTATTTTTGTGCTTCCTATCG 78892 33 97.0 35 ...C............................. ATTTTCTGGTTATTGGTTGATAGGTACAAAACGAT 78824 33 100.0 34 ................................. AATGTAGGAGTTAGCACTCTGTCCAGTATCTATG 78757 33 100.0 33 ................................. CTCAAAAAGTTTGATTGTATCACCGTTTCCACG 78691 33 100.0 34 ................................. AATGAAAATGGCAGTATTACCACTGCTTAAAGCA 78624 33 100.0 35 ................................. ACAGACCTTTCGGGGGTAGTGGAGCCTGTATTGTC 78556 33 100.0 34 ................................. GCCCCCTCTCCCGGACAGGTGATACAGAAAATCC 78489 33 100.0 34 ................................. GACATAGTACGGATAAAAATATATAATGGATATA 78422 33 100.0 35 ................................. AGTAAGCAAAATGGAAGTCCGCACCATCTGTACAT 78354 33 100.0 34 ................................. TCCTTCCACCCAAGTCTTGTCTACCACCACCAAT 78287 33 100.0 34 ................................. ATTTTCCTCCTGGTTCATAAGAGCGTCTGTTGTT 78220 33 100.0 33 ................................. ATGCTGATAAAATTGTTAGGCAGGTAGTCAATA 78154 33 100.0 34 ................................. GCAGATGCCAAAGGGAATTTCCGAGTATACGATG 78087 33 100.0 34 ................................. TGATGATATAATGTGGCTTCCTGGTTTTTGCATG 78020 33 93.9 33 ...............................GT ATTCTGGATTCAATTACTGATCCTAAAAAGGAT 77954 33 97.0 0 ................................G | ========== ====== ====== ====== ================================= ==================================== ================== 95 33 99.8 34 GTCTTCCTCCGCTTGGAGGAAGTGGATTGAAAC # Left flank : ATACCTCTCTGTTTTAATAAGATTTTTACTAACCGGCAAAGTCAGTAATCTTATTTTACACCGAGGTATTTTTTTCTCAACCTTCTTTCTTGGAATTCCTTATATTTTAATTATACAGGAAGCTCCTAATAATTTGTTATATCGTATACCG # Right flank : GCTGTGTTAGCAGTAGTAATGGGCTGATACAAGTTTGGTAGTGTCATAAATTTTGTGTCTTCGGTAATAAATGGATCCAATCTGGAAAGAATTAAATATGAATATTCTTATCAGAGAGGAGCCTATTCTGGCTATTGCAAGGGAGCAATTAAGACAAATTATTTCAGAAAATGACATTAACAGCGTATCTGATGTTTACGAATTATTTCGTGAAAGTTTCAAGGATATGTTGCAAAAGCTTTTGGAAGCAGAAATGGATGTTTCCATCGGCTATCCCAAAATGCAAAAGATGACATCATCACTACCAACAAACGGAACGGCTATTCACCTAAAATGGTAAAGAGTCAGTATGGCGAAATTCCAAGAGACCGAAATGGAGAATTCGAACCACAGATTGTTCAGAAGCATCAGCGGGATGTTTCCGGGATAGAGAAAAAAATTATTTCCCTATATGCCCGTGGCATGAGTACCAGAGATATCCATGACCAGATCGAGGATCT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCTCCGCTTGGAGGAAGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.50,-8.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : NA //