Array 1 8155-6692 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFL01000008.1 Acinetobacter baumannii strain ABBL066 contig-1000042, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8154 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 8094 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 8034 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 7974 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 7914 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 7854 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 7794 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 7734 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 7674 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 7614 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 7554 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 7494 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 7434 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 7374 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 7314 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 7254 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 7194 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 7134 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 7074 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 7014 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 6954 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 6894 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 6839 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 6779 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 6718 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : GAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGCA # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [16-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 871-3 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFL01000015.1 Acinetobacter baumannii strain ABBL066 contig-13, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 870 28 100.0 32 ............................ ATAAAGCATTAGAGAAATCATCGCGTGCTGTA 810 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 750 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 690 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 630 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 570 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 510 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 450 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 390 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 330 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 270 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 210 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 150 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 90 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 30 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 15 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: R [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.14 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 5961-10911 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFL01000015.1 Acinetobacter baumannii strain ABBL066 contig-13, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 5961 28 100.0 33 ............................ CTTTTGGGAGTGGGGCATTTGAAATTAGTTTGT 6022 28 100.0 32 ............................ TTTGACTTTGCTGCCTCTAACTCTTTTGTTTT 6082 28 100.0 32 ............................ AACTGGAGCAGGATGAAGATGCGAAATTAATT 6142 28 100.0 32 ............................ AACAGTAAACTACCGGATTTACAGTTCAGACA 6202 28 100.0 32 ............................ GAACTCGCTCAAGACCAATGAAGTTAATGGCA 6262 28 100.0 32 ............................ CTACTAACTGCCTTGCATCTTCAGCACCGAAC 6322 28 100.0 32 ............................ ACAATGTGGGGCTTTTTTTGTTTGTGAAATTA 6382 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 6442 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 6502 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 6562 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 6622 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 6682 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 6742 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 6802 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 6862 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 6922 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 6982 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 7042 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 7102 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 7162 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 7222 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 7282 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 7342 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 7404 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 7464 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 7524 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 7584 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 7644 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 7704 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 7764 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 7824 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 7884 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 7944 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 8004 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 8064 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 8124 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 8184 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 8244 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 8304 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 8364 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 8424 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 8484 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 8544 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 8604 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 8664 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 8724 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 8784 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 8844 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 8904 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 8964 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 9024 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 9084 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 9144 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 9204 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 9264 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 9324 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 9384 28 89.3 32 ....T.......AT.............. TTAAAATAAATGCCTGTGGTTTTTTCTTAACT 9444 28 89.3 32 ....T.......AT.............. AGTTTCCGAAGTTGAATTACACTCGCCAAGTT 9504 28 89.3 32 ....T.......AT.............. TAACACAGTGATTTGATTACCTTGAGCAACCC 9564 28 89.3 32 ....T.......AT.............. ATCTTGATGCCGAGGTCTTTAGCTTCTTGAGA 9624 28 89.3 32 ....T.......AT.............. TCATCCACCTTTGATGAAACGGATCCACGCAA 9684 28 89.3 32 ....T.......AT.............. TCTTGTGTGACGGCCTCCACTCCAGATCCCGC 9744 28 89.3 32 ....T.......AT.............. TTAAGCTTCAAAAATAGCCATTGATTATAAAA 9804 28 89.3 32 ....T.......AT.............. TGACAACTTTCCACGGCAATCAGGGCTTTCCA 9864 28 89.3 32 ....T.......AT.............. TAAAGATGCACGTGGCCTAATGCAAGTTATTC 9924 28 89.3 32 ....T.......AT.............. TTTAAAATTAGGTGCTGAGTTACCACGGCTCA 9984 28 89.3 32 ....T.......AT.............. TAAACCAAGAACTTGAAGATTTTGATGCTTAT 10044 28 89.3 32 ....T.......AT.............. TAAAAATAGTGTGTTAATTATTTATGATGAAA 10104 28 89.3 32 ....T.......AT.............. CGTATACATGCACATCAATACGATATCCCGAT 10164 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 10224 28 89.3 32 ....T.......AT.............. TGCAGCTACTCGACATGTTGGTAGGGCAGATG 10284 28 89.3 32 ....T.......AT.............. CAGTCGGCTGGTGCTAATTGAATAAAATCGTT 10344 28 89.3 32 ....T.......AT.............. AGATTGAGGCGATTTTTATCGCGGACATTGCC 10404 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 10464 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 10524 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 10584 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 10644 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 10704 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 10764 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 10824 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 10884 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 83 28 94.4 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : ATTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTA # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.71, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //