Array 1 65636-56007 **** Predicted by CRISPRDetect 2.4 *** >NZ_LMSK01000004.1 Rhodanobacter sp. Soil772 contig_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 65635 28 100.0 32 ............................ TGAATGTTGGGCGCCTCGATGGTCACCTTCGT 65575 28 100.0 32 ............................ TGCGAGTTGGCGAGGTATTCGGTCGACGCCTC 65515 28 100.0 32 ............................ GGGCGCTACGCCCAGTTGCAGGCGATAAAGAA 65455 28 100.0 32 ............................ ATGTGCACGCGGCCGTCCAGCATCCGCTTCAC 65395 28 100.0 32 ............................ ATGATCGACCCTGAAGAAATCGAGGCCATCAC 65335 28 100.0 32 ............................ TTGACGGACTGCGTCACGTTCGAGACGACATT 65275 28 100.0 32 ............................ CGCTCGCGTAACAGGTGCACATACCGCAGCAA 65215 28 100.0 32 ............................ TCATAGACGATGTGCGCCGGGTTCATCGCCTT 65155 28 100.0 32 ............................ ACCGAGGTAGCCGTTCGCGCCGGCTGGCTGCA 65095 28 100.0 32 ............................ TTGACATCGTGCAGGTGCCTTGCGCGGCGATG 65035 28 100.0 32 ............................ TGATGCCTGCCGTCTCGAAGGCGATGGACGAG 64975 28 100.0 32 ............................ GAGAAGGCGAAGAAGAATCAGCACGTCGCTGA 64915 28 100.0 32 ............................ CGGATGCGAAGCAGGCGCTGCGCATGCAGATC 64855 28 100.0 32 ............................ TGACGGAAGCGCAGAAGCGCGCGTACATCATC 64795 28 100.0 32 ............................ TTGTTACGGCCGAACAGTGCCGGGATCGGCGC 64735 28 100.0 33 ............................ GTACGCGCCACGCATCACCTGCGAATGGTGCAA 64674 28 100.0 32 ............................ GCGTTGCTCATGTGCGTCTTGAGCCCGCGATC 64614 28 100.0 32 ............................ GGCGGGCAAGTCATCGGTGCGGCCGATGTAAC 64554 28 100.0 32 ............................ TTTTCGTTGAGCGGGCTGTTGTCGCCGATGGC 64494 28 100.0 32 ............................ GCCTGGCTCAGCGACGACGCCGGCGCCGCCCT 64434 28 100.0 32 ............................ AGCTCGAAGCGCCTTACGGCTGGATCCACACC 64374 28 100.0 32 ............................ GAACGATGACGACGGTAAGCACGCCAAGCATC 64314 28 100.0 32 ............................ AAGGGGCCAGCCATAGCGATCACCGGAGACAC 64254 28 100.0 32 ............................ ACCACCACCGCCGCCCGTGCCGCTGGTGGGGA 64194 28 100.0 32 ............................ AGCGCCGAAGCGCCGGCCACCCCGAAGGGCAT 64134 28 100.0 32 ............................ CGGCGTGCCCGGCACTTTTGAACTGTGGCTCA 64074 28 100.0 32 ............................ TAACGTCGTGCCGATCTCGTTGCCGCCCGCAT 64014 28 100.0 33 ............................ AGGAACATTGCCCTGCGCATCGAGCGGCAACTC 63953 28 100.0 32 ............................ TACTGGTCCAGGCCAACTCCGGTGGAGGCAAG 63893 28 100.0 32 ............................ ATCAACGGCGTCACCGGCATCAGCCGCGACGT 63833 28 100.0 32 ............................ TCGCTGCCCGCCGGCGGCACCGCCAGCCTGGC 63773 28 100.0 32 ............................ AACGTCGGCGTCGATGCTTCCGGCCACGCCAC 63713 28 100.0 32 ............................ AACGCCGAGCACCCGTGGGTGGTCAAGTGCGG 63653 28 100.0 32 ............................ GGCACCGCCGACGTAGCCGCCGCGCTGCTGGC 63593 28 100.0 32 ............................ AGCGCGGTGAGGTCATCGGCCATTGACCAACT 63533 28 100.0 32 ............................ CAGCCATCCCGGCGCCTGCGCCTGCCCTTACA 63473 28 100.0 32 ............................ GAGCAGGATGCCGCTCGCCTGGCCGCCGCCGA 63413 28 100.0 32 ............................ GACGAGACCATCGACGGCTACCGCGGCATGAA 63353 28 100.0 32 ............................ GACCGAGGAATGCGGCCGGGTGGACAACCGAT 63293 28 100.0 32 ............................ ACGCCAGCCACGGCAGCAGCGGCGCCGGGCAG 63233 28 100.0 32 ............................ AGCGCCTGGTTCCACACGCTGACCTGCTCGCC 63173 28 100.0 32 ............................ TGACCAGCGCGCTGCGGCAAACCTACATCGGC 63113 28 100.0 32 ............................ ACCAAGATCAGCCGAATGGTCGACCTCGCCGC 63053 28 100.0 32 ............................ AGCATGGCCATGGCACCAGACGATTTCTCCAT 62993 28 100.0 32 ............................ ATGTTGTTCATCGCACCTGTCGCCGCCGGCGA 62933 28 100.0 32 ............................ TATGGAGAAAGTCCGTGCGAGTCCCGGCGCGC 62873 28 100.0 32 ............................ TTGTCGATGCGCTTGAACGTGGCCTTGAAGTC 62813 28 100.0 32 ............................ AACCCCGAGGCGAGCTACCAGCAAGACGTGCG 62753 28 100.0 32 ............................ ACGCCGCTGGCCATGCCGGTGCCGTCGTACAA 62693 28 100.0 32 ............................ ATGAACCAACGCCAGATCACCCACCCGGCCGG 62633 28 100.0 32 ............................ GGCAATGCCAGTGGTGCGGAAAGCGCAAACCC 62573 28 100.0 32 ............................ TATCGAGACGGCGCCGAAGGATGGGACGCATA 62513 28 100.0 32 ............................ GGCATGCAGGTCACCGGCGAGGTGTTGCGCGA 62453 28 100.0 32 ............................ GACATCAACAATGCAGCACTGAAGCTGGTCGC 62393 28 100.0 32 ............................ AGTCGCACGCCTGGAAGCCTTACGGCCGCGCC 62333 28 100.0 32 ............................ GCCAGCGCGGCTTGCTGCGGATCCCAGGGGTC 62273 28 100.0 32 ............................ TTCGACTATTACCGCACCGCACGCCGGATCAC 62213 28 100.0 32 ............................ TGCTGACGCCCTCGGCCGTCGCCGTGGGCACA 62153 28 100.0 32 ............................ GAGTTTCGGCAGGCGAAGTGGTTCGACCACGA 62093 28 100.0 32 ............................ TGGTCGCACCGCGATCGCACCTTGCAGGCTGA 62033 28 100.0 32 ............................ TGGATCTGATCCACCTCGACGAGTTCGAACAC 61973 28 100.0 32 ............................ GGCGAGCGTGCACAGGCCCATGTAGCTGATTT 61913 28 100.0 32 ............................ GGCGGGCAGCACGCGCACCAGCAACGTGAACT 61853 28 100.0 32 ............................ TTTGTCGGGCACTCGCAGTTCGGGAATGTGCG 61793 28 100.0 32 ............................ GTTAGGTGGCTCCGCGAGCAGTGCGGGCCGAC 61733 28 100.0 32 ............................ AATGGCGAAAGGGCATTTCGTGGCCGTCAGAC 61673 28 100.0 32 ............................ AACTTCTCCCGCGATGCCTTTACGTTCGTCGC 61613 28 100.0 32 ............................ AGAAAGATGGCTCATTGCCATCGCGGCAGACC 61553 28 100.0 32 ............................ GATCAGGTGACTGGCGTTTCCGCTCGTAAGTC 61493 28 100.0 32 ............................ GCGATCAGGGAGCGTTCGCATGATCGTCTTCA 61433 28 100.0 32 ............................ ATCCGCTCACGGCTTGCTTTGACACTCGCAAC 61373 28 100.0 32 ............................ TCTACGAAGTCGTAATGCTGGCAGGCGCGAGC 61313 28 100.0 32 ............................ GTGTCCGCCACGTCGTCATGGCACTCACGCCA 61253 28 100.0 32 ............................ CGAACGCTGCGCGCGCCAGTAGCGCTGCGCTT 61193 28 100.0 32 ............................ TGGGCCACCGCGTTCGCGCCCGGCGTGCTGGC 61133 28 100.0 32 ............................ TCGACGTAGAGCGTGACCGCCTCACCCTGGCC 61073 28 100.0 32 ............................ GATCCGCCCGAGAATCTGACGAAACGGACGCT 61013 28 100.0 32 ............................ ACGAACACCGGCTATAGCAGCGCGGCCACGAA 60953 28 100.0 32 ............................ GCGCGTCGAGCGGGTCGATGCCGTCAAGCAGG 60893 28 100.0 32 ............................ GAAGGAAGATCGCAAACAGATCATTCGCGACT 60833 28 100.0 32 ............................ GCCGTGGCGATGGGGCGGGCGCCGCTGTCGAT 60773 28 100.0 32 ............................ ATGTTCAGGACGTCGATTTCCTGCACGACGCG 60713 28 100.0 32 ............................ AAACTCTTCCGGCACCACCCCGCGATCGAGCA 60653 28 100.0 32 ............................ GATGTGGATGATGGTGGATCGGTTCATGGGGT 60593 28 100.0 32 ............................ ATGACGCTCGGCGCGATCCCCGATGTGGGCAG 60533 28 100.0 32 ............................ AGCGTCATGCCCACCGGCAACCGCTGCAGCAC 60473 28 100.0 32 ............................ CAGATGTTCTGGCTGCCGATGTATTTGTTGAG 60413 28 100.0 32 ............................ GACATGAAGGCCTTGCGCAGGCTCAGTCGGCC 60353 28 100.0 32 ............................ ACCTGAGCCGGGCCGACAAGGGCGCGCTGGGC 60293 28 100.0 32 ............................ AATCAGCACACCCACCGGTGCCACGTCGAACT 60233 28 100.0 32 ............................ AGCAGCAGCGTCCACAGCGACGATCCGACCAC 60173 28 100.0 32 ............................ GGCACCCAGCCGGCCGAGCTAGTGGAGTTCGG 60113 28 100.0 32 ............................ ATCGTTCATTCAGATGGCTGCGCGTGCCCCAT 60053 28 100.0 32 ............................ ACCTTCACCCGGTTCAAGCGCGAGCTGACGAT 59993 28 100.0 32 ............................ ATGTTGTTCATCGCACCTGTCGCCGCCGGCGT 59933 28 100.0 32 ............................ TGCACGTCCGCGCTTGCCCTGGCCGTCGCTAT 59873 28 100.0 33 ............................ GGCGGCGACGAGCGCATGCCGCGCCTGCACCAG 59812 28 100.0 32 ............................ AGCCAGCAGCTTGGCTTCCTGGTGCAGCTGGT 59752 28 100.0 32 ............................ TTCTTGGCGATGCTGTGGCGGATCAGCGCGGC 59692 28 100.0 29 ............................ TGGTCGAGCCTGTACCAGCACCCGGTACC 59635 28 100.0 32 ............................ GGCAGCACGTGCCAGTCGGTTACTTCGAAGTC 59575 28 100.0 32 ............................ CGGGTCAGGCGCTGCCGCGACTATGGCAACGA 59515 28 100.0 32 ............................ GTCGAGGCGTTGAACGCCCGCGACTTGGCCCG 59455 28 100.0 32 ............................ TTCAACGGTGGCATGGTGGTGTTCTCCAGCTC 59395 28 100.0 32 ............................ GCTGCGAAGTCCTGCGCCGAGGCATAGACCGG 59335 28 100.0 33 ............................ GACAAGACCACGATCGACGACCGCTTGGTGTTC 59274 28 100.0 32 ............................ TCGATCAGGAAGCTGTTGAGCAGAGCGTCCAT 59214 28 100.0 32 ............................ CGGTGGTGACCCGGGCGGCGGTTGAAGGCGAG 59154 28 100.0 32 ............................ CGCAGCAGGAGAAGAGTGATGGGCAACCACCT 59094 28 100.0 32 ............................ ACCGCCGACGGCCGCAAGCTGTCCATCAGCGC 59034 28 100.0 32 ............................ TGCTTGTTCACGCCCGTGATGACCGCAGCCGT 58974 28 100.0 32 ............................ GTCTACTGATCCACCTGCCGCCGACCCCGTTG 58914 28 100.0 32 ............................ GCGAATGATGCCGGCGTGGCATCGGCTGCGAA 58854 28 100.0 32 ............................ GCCGGCACGGCCGGCACGCTGGCGTTCACCGT 58794 28 100.0 32 ............................ ATCAAGCGGCCGATGTCCGATGGCACGATCAA 58734 28 100.0 32 ............................ ATTGCCCCGGAACGCCCGTCCCACAAGCCTTC 58674 28 100.0 32 ............................ AGCTCGTGCAGTTGCAGGCGAGCCAGCGGAAG 58614 28 100.0 32 ............................ TGGTGGACCGCTGGCTGGACCGGCTGGGGCAT 58554 28 100.0 32 ............................ ATGTTTCTCTACGCCCAAGACGGCCGCGTGCG 58494 28 100.0 32 ............................ ATCGCGCGCTCGGTGGTGATGCCGTGGATCTC 58434 28 100.0 32 ............................ ACGAAATGCGCACGCAGGTGCGCGTGCCCGCC 58374 28 100.0 32 ............................ AACGTCAATTCGCCTTCGAGCTGCTTCGCTTC 58314 28 100.0 32 ............................ TTCCTGCCCTGCGAGTGGGATGTGCAGCCACG 58254 28 100.0 32 ............................ TGCACTTTGCCGCGTGCCGCCGGCATGCGCGG 58194 28 100.0 32 ............................ CCGTCGACCAGGCTGCCACGACGCGCGGTCGT 58134 28 100.0 32 ............................ TCCACTTGACACCATGAGCGTGTAGTTGATGC 58074 28 100.0 32 ............................ AGCAAATCCTTGGCCCCGGATGTCGTTGAAAC 58014 28 100.0 32 ............................ ACCCTGGCCATCGAGGCGCCGCGCGACACCCT 57954 28 100.0 32 ............................ AAGTCATAGGCTTGGCCATCCACCCATGAACC 57894 28 100.0 32 ............................ GTCGGTGCCGGCCTTCGCGCGCAGGTCGTGGA 57834 28 100.0 32 ............................ TCACGCCGCTGGCGATTGTGGCGGTGCTGATC 57774 28 100.0 32 ............................ AGTACCAAGCCGGCCGCAACGCCGTCATCGCC 57714 28 100.0 32 ............................ GTCGATCTTGACCGAGTTGGAGTTGAGGTTGA 57654 28 100.0 32 ............................ CAGCATCGCCGCCTTGGTGTGCCACGTTTACC 57594 28 100.0 32 ............................ TGTTCGAGGAAGGCCGTGATGACGCCCATGGC 57534 28 100.0 32 ............................ CAGGCCAACCTTGCCGGCGCCATCCGCCATTG 57474 28 100.0 32 ............................ GACACGCTGCAGCCGGCCGCGCGCGCGCTGTT 57414 28 100.0 32 ............................ TGCGCGTTGCGCGCATCCTCGTTGGCCTGCGC 57354 28 100.0 32 ............................ GGTCTGGTCGCAGATCTGGAACAGGCCCAGGT 57294 28 100.0 32 ............................ ATGCCCGCCGCCGCGATCGGCAATGTCCTGGT 57234 28 100.0 32 ............................ TTGAACGGCAGCGAGCCATAAACGACGGAGCC 57174 28 100.0 32 ............................ ATGAACGCGTGGTCGTGCTCGGCCTCCCACAC 57114 28 100.0 32 ............................ GAGCACCGGGACCGGATGCAGCACCCGAACGT 57054 28 100.0 32 ............................ TGCAAAACAGTTCTTGGCCTGCTTTCCGTAGC 56994 28 100.0 32 ............................ TGCCGCAAACCACGCATATGGCCGCGCAACCA 56934 28 100.0 32 ............................ ACGTCGTCGCCGCGCGAGGTGATGGTGGCAAT 56874 28 100.0 32 ............................ AGCAGGTCGATGCGATTGGCGCCGGCGACCAT 56814 28 100.0 32 ............................ TCACATCACCATCTTCTGTTGAAGCCCCTACA 56754 28 100.0 32 ............................ AGCTACGCCGACCATCCGCGCAAGCTGGTGAG 56694 28 100.0 32 ............................ AGCGGCACCATCAGCATCAATGCGCCCAACCT 56634 28 100.0 32 ............................ ACGTACCTGCTGGCCCATGATCAGTGCTCCTC 56574 28 100.0 32 ............................ CAGATGGACTTGGCGCCGCAGTTGCTGACGGC 56514 28 100.0 32 ............................ ATCAGCAGCGCCTTGCGCACCGTGTCGATGCC 56454 28 100.0 32 ............................ ACGTTGCCCTTGTCGGTTTGGATCAGCCTGTA 56394 28 100.0 32 ............................ CAGCCAATGAAACCAGCACCACCACCGAAGCA 56334 28 100.0 32 ............................ ACCTCGGCGCCTCGCTGGAGCTCGAACAGTCC 56274 28 96.4 32 A........................... GAAGATCATCATGATCTCGCGACCGTCCTCCG 56214 28 100.0 32 ............................ ACCGCGTGATGCTCGCCGCCGGCGCTGATGGT 56154 28 100.0 32 ............................ GACCCACAATCAAGGGCGAGCCAGCATGGGAC 56094 28 96.4 32 .................T.......... CAGTCCGCCACCTGCTTGATGATCGGGAACGT 56034 28 96.4 0 ...................A........ | ========== ====== ====== ====== ============================ ================================= ================== 161 28 99.9 32 GTTCGCTGCCGCGCAGGCAGCTCAGAAA # Left flank : GCACTGCAGCAACTGACGCAAGCAGACTGGCTCAAAGGCGTACGCGATCACGTCCGCATGACCGAGATTGCCGGTGTACCGGCAGGTGCATCGCACCGCACCGTTCAACGCAAGCAATTCAAGACCAGCGCCGAGCGTTTGCGCAGGCGACGCATGCGCCGCAAGGGAGAAACGGAGGAACAAGCAGCCAAGGCCATTCCATCCAGCATGGAGCATCGCCCCAATCTTCCCTACGTATACCTGCGCAGCCACAGCACCGGACAGCCGTTCTGCCTGTTCATCACGCTCGGCCCGCTCGCTGTCGACGCGACACCCGGCAGCTTCAACAGCTATGGCCTGGGTGGAACCACGACAATCCCCTGGTTCTAACCCTTTTTCCTGCCCTGCTATCCAACAATCGAAAAATCAATGATTTGGCGGCTCGTCTCTCAATAAGGGGCAGCCGCCTTTTTTTTGCCTTTATCGCCAATTCATCAAATACTTGGCCACGTTGAGCCCTA # Right flank : ACTCGACTTGGGTGTGATGTCAGAACCTGGTGTTTGCCTCCTGCACAAGCAGTGACAAATACATCCCAGCTAACCGCGATCTTTCCACTCTTCGCGCAGATGCCGTTGATGGTTTAGGCCATTGTCTTGCTGCCAGATTCCTGCAGTGCGGCTTAGCGCAGACTGCAGATTAATTCGGCTGTCGTTCTCGCGCTGGATGCGATAATCATGCACAGCTTGCTTTACCAGTTCGGCTACCGACAGATCGCGAGACCGTGCCTCACGATCCAGCCACGCTTGGTCATCTGTATCCAGGTTGATGGACACGCACGTCATGCAATATATCTAACATGAATTCCCGTTTATCGGCTCGTGCTTCTCGTACCCAAAGCGGAAAATGAGAGCGGGACCGTAAAGGAGCTTCACGCATACCTTCCGATCACACTCCCGCGAGCTGCCGCCGCCGCGCCACCTTGCGCTCACGCCGCCGCGTCCACCACGCCTTCCGCCGCTCGGCGAGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //