Array 1 977921-976634 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP018847.1 Xanthomonas citri pv. citri strain LL074-4 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 977920 31 100.0 37 ............................... AAATGCTTTCGACGCGCATAAAGCGCTGGCGCAGGAG 977852 31 100.0 35 ............................... CTGTTCAAGCTCCGCCGCCTGATCCGCTTGCCGAG 977786 31 100.0 35 ............................... CGCTGCACGGATGCGCCAGGCGGCGAGGCGATCAT 977720 31 100.0 36 ............................... TCGAGCGCATCGATGACGGTCACCCATCCCCCAATG 977653 31 100.0 36 ............................... GTGCCACCGACAGCGACGCACGTGGACCTGCAGATC 977586 31 100.0 34 ............................... CTCTCTCACGCCGCGCGTGCGAGATCCTGCGTGC 977521 31 100.0 36 ............................... GCAGACTGCCGAGGCCGGCATGCTGGAGGGGCGCCT 977454 31 100.0 37 ............................... GGGTTAACAACGCCTTGAAACGGCTTTGCCGCGACGC 977386 31 100.0 35 ............................... GCCATCATGCTTTGAATGCGCTTACCCACGGCGAA 977320 31 100.0 35 ............................... GCGGATATGTGATTAGACCCTTTTACGACTTTCAG 977254 31 100.0 34 ............................... TCATTGAACCCAAGGACCACTTCGCAGGGCGACT 977189 31 100.0 34 ............................... TGTCGAGCGCGCACTGCTGCCGCGATGGCCGGAA 977124 31 100.0 34 ............................... GGCTGGGAGCGTTACAAGTTTGAGCAGCCCGTAG 977059 31 100.0 35 ............................... TGGTTCAGGGCTGGAAAGACTTGGATGCCCGCATC 976993 31 100.0 34 ............................... CTGACTATCCCTGCATAGGCCACGACCTGCGAGG 976928 31 100.0 36 ............................... AAGAAGACCAGTCTGCGGCGTCGCGGCATCCTGGGG 976861 31 100.0 34 ............................... CTGAGTTCGTCGCCGTCCCGGTCGTCTGACGCGT 976796 31 93.5 34 T...........T.................. CTGAGTTCGTCGCCGTCCCGGTCGTCTGACGCGT 976731 31 93.5 36 T...........T.................. CATGCCATATGCGGCGAGATCGCACAGCAGAAGGAA 976664 31 96.8 0 .G............................. | ========== ====== ====== ====== =============================== ===================================== ================== 20 31 99.2 35 GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Left flank : GACGCGGCTCAAGTCCCATGATGATTCTTGTAAGCTACGACGTCAGCACCAGCTCTCCCGGGGGCGAGAAGCGCCTGCGCAAGGTCGCCAAAGCCTGCCGGGACCGTGGCCAGCGCGTGCAGTTCTCGGTCTTCGAGATCGAAGTCGAGCCTGCCCAATGGACTGAATTACGGCAGCAGCTATGCGACCTGATCGACCCGGCCCTGGACAGCCTACGGTTCTATCACCTTGGCGCGAAATGGGAGACCCGCGTGGAGCACATCGGCGCCAAGCCCAGCCTGAACCTCAAAGGCCCACTGATTTTTTGACGCGAACCCCAAGCGCCCCATAAAAACCGGGCAGGTTCGCAGTCTCCTCAAGCAACTGATTTGCAAAAAAAAAAAAAAAATACATAGCGGATTCACGGGGTCCGCATGACGACTTCTCGACTGCTTTTTTCAGCAAGTCCGCGCAATTGCCCGTGTTTTAGCAACGATGGCAAACACTTATGCTAAGGGGGG # Right flank : AATTTAAACTCGCCCCGCCAGCCGGACGCTGACGAGGTGCAGGTTGGACATGCTTGAGGCCTGCGTATGGCAAAGATCAATACGCACGCAGATCAAAAATTGGGCTCCGTCCATCAACGCTTGAGAACCATTATTTGACGATGATGGTCTGAGGCGTGCCTGCAGGCTTGCCGTCCACCATGACCTGCGCGGTGTAGGTGCCGGCCGGCCAGCCATCGGGCTTGCTGAAGCTCAGGTTGGTGGTTTCGGCACCGGTGGTGTTCAACGTCGCGTTCTGTTCGCCAGCCACCTGGCCATCCTGGTAGGTCAGCTTTGCCGACACGGCCACGTTGCTCGCGCTGCCGTCCGTCTTGACCGAGACGATGATGGTGTCTTTGCTGCCGACACTGGTCGCCGGGGTCACCGTCTTGTCGGCTGCGGCCTGGGTGCCGACGGCCACACTGGACACCGTCACTGCGCTACCCGTGGCAGCACCGCCATCGGTGCTGGCCGCACCGGTT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCTCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCTCACGGGCGCGTGGATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.41 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //