Array 1 4096870-4098339 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007399.1 Pseudomonas aeruginosa strain F22031 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 4096870 28 100.0 32 ............................ TGCTGTTGCGTCAAGCCTCGGGCGGCCCGAAA 4096930 28 100.0 32 ............................ ATCTGCGCAATGGTCTTTCGAAGATGGGCGAC 4096990 28 100.0 32 ............................ ACCTGGGGTGCCTTGCCCGCCTGCCGCTGACG 4097050 28 100.0 32 ............................ TTGGACGGCCACGCATCAGCCTTGCCCAGGCC 4097110 28 100.0 32 ............................ TTTGCATGCTCGCACTACGGCAGGCACACGCT 4097170 28 100.0 32 ............................ TTGATGGCGTCGGTAAAGCCGCTGGTGAGCCC 4097230 28 100.0 32 ............................ TGCCGGTAGCAGGGCATCAACAGACCAAACAC 4097290 28 100.0 32 ............................ GTCGACGTCGATGAACGCCGCGCACGGATGGA 4097350 28 100.0 32 ............................ TTGCTAAGCATCCACTGTGCCGCTCCTGTAGC 4097410 28 100.0 33 ............................ ACGTATCAGGCATCGTACTCGGCAAGGTGTTCT 4097471 28 100.0 32 ............................ ACATGGGAATGCTCTCCTGGCACGAAGAAACG 4097531 28 100.0 32 ............................ GCCCGCTGGGGAAGCCGCAGTTATCCGGAGTA 4097591 28 100.0 32 ............................ AGGTTGACCAGCATGGCCGGCATCGACAGCGT 4097651 28 100.0 32 ............................ TGGGCCGGCGCCTACGCGGCGCATCAGCCGGT 4097711 28 100.0 33 ............................ ATGCAGCCAGGGCTTACTCCGCTGCTGCTGGAC 4097772 28 100.0 32 ............................ TTGAGCTTGTCGTTGTACTCGTCGAGGCTCAT 4097832 28 96.4 32 .............T.............. ATACTGACTCAGCCAGGGAAAAGTCACTTGGA 4097892 28 96.4 32 .............T.............. TGGTCGAACAGATGGCGGTCCTCGGCCAACTG 4097952 28 96.4 32 .............T.............. ACGTCGGAACGCAACTACCTGACCGCGTTGGT 4098012 28 96.4 32 .............T.............. ATCAGGTACAGCACCAGGGCACCGAAGACGTT 4098072 28 96.4 32 .............T.............. CGCAACGTTCGTGATCTGCCGTTCGCCGCCCA 4098132 28 96.4 32 .............T.............. TCGGCGAGGCGATCGATCATGCGAATCAGCAA 4098192 28 96.4 32 .............T.............. ATCGACCACGACAGTGCTTCCCTGGTCTATTC 4098252 28 96.4 32 .............T.............. ATTGGCCGTGCAAGGTCCACCAGTCGATGCTT 4098312 28 96.4 0 .............T.............. | ========== ====== ====== ====== ============================ ================================= ================== 25 28 98.7 32 GTTCACTGCCGTACAGGCAGCTAAGAAA # Left flank : CATGTGTCCGCGTAGCGCCACCCTGTACGTGGACACCCATGCACTCCCCACGCACTTGTTCGACAACGCGAAAGTGCGCCTGAGGTCGGCAATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCCGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGTTGCATCGCCCATCACAAGACCTTTCGCGCTCGAACGGCGAGGCTCACCGCCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGACCTCGAAAAAAGAGGGTTTCTGGCAGGAAAAACTCGGTATTTCCTTTTCCTTCAAATGGTTATAGGTTTTCGGGGCTA # Right flank : ACTCAAGAAAGAGCAGAACGGCCAGCCTGCGCCGTTCATTGCCGTGTAGTCCCGTAGGGCGAATGCCGCCATAGGCGGTATCCGCCCTACGGATCGGGTTCCTGGCATCCACGAAGTGAGGCTTGCCCTCCAAGTGGTGGGGCGGCAAACCCGCCCCGTCAGGAGGCCGAGCGGAATCGTTGCGGAGGGGGACGAGTGGCAGGATGCCGCGAGAGCCGCCTCGGTCCACGAAGGACCGTGGCGGCGTGCCGCCGGGAGCAACGATGCAGCGAGGGCACCCCAGCCGAGAAGCGGCTGGGGCCGGATGCCGGGGCGAGTCTTTTGGTTCCTTTTGGACGCTTGCAAAAGGAACTCGCCTGGGAAGGCGAAACAAGAGGCCAAGGCAGGCACAGAAAACAGCTTGAGCAGCAAACATGAAGCCCGCTCGAACGTCCCGTAGGGCGAATACCGCCACAGGCGGTATCCGCCGATGCCCTGGAGAGCCGGCGGATAACCGCAAG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTAAGAAA # Alternate repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [58.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //