Array 1 788646-789468 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_BQHD01000001.1 Citrobacter farmeri strain TUM17580 sequence01, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    788646	    29	 100.0	    32	.............................	ACCATTAACGCGGTGCCTCAATTCCAGCCGTT 	
    788707	    29	  96.6	    33	............................T	GGCCGGATATTCCTTTGCCTGATGTTCCCGAAT	
    788769	    29	 100.0	    32	.............................	CTTTATCCGGAACCTTTGTAAATTCAATACTC 	
    788830	    29	 100.0	    32	.............................	AGTTAAACGGCGTTAAAGAATCAATCGCAGAC 	
    788891	    29	 100.0	    32	.............................	GGTTGATCTCCAGTCGGAGGAGGCCGGGAAAA 	
    788952	    29	 100.0	    32	.............................	CAAACCTGATCACTCTGATTTCCACCCAGTAG 	
    789013	    29	 100.0	    32	.............................	GGGGACGCGCAATGAGCGACACCACCAAAGTG 	
    789074	    29	  96.6	    32	............................T	GTGTCACGCGGGGTTATAACGGCAGCCGCTGC 	
    789135	    29	 100.0	    32	.............................	CACAACTGGACGTTTTGCGTTGGGACAATAAC 	
    789196	    29	  96.6	    32	.............T...............	CAGACAGGTGAACGCGCCAGCACGGAGGATGG 	
    789257	    29	 100.0	    32	.............................	GATATTTCCCCGACTGAAGGCGAGGAGCGTTT 	
    789318	    29	  89.7	    32	.A......T...........C........	GCCAAGAAGTTCGAGATGATGTCTATCCGGAA 	
    789379	    29	  89.7	    32	.A.........A.T...............	GTAAAATAAACCTCCCATATTGCGAGGATTTA 	
    789440	    29	  89.7	     0	A.........................GT.	|                                	
==========	======	======	======	=============================	=================================	==================
        14	    29	  97.1	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GGTGCTAGCCGCCGGAGATATTGAGCCACCGCAGCCTGCGCCGGATATGTTACCTCCGGCTATACCTGAACCCAGTTCTATTGGTGATCAGGGACATCGGGGAAGTGGTGGATGAGTATGGTGGTAGTGGTTACGGAAAATGTCCCTCCGCGACTGCGGGGACGGTTGGCCGTCTGGTTGCTGGAGATCCGCGCGGGTGTTTATGTTGGCGACGTATCGAAACGCGTACGTGAAATGATCTGGCAGCAAATAGCACAACTTGGCGGGGAGGGAAATATCGCAATGGCCTGGGCAACAAATTCTGAGTCTGGTTTTGAATTTCAGACTCTGGGCGAGAACCGCCGCATGCCGGTAGATTTAGATGGTCTACGACTGGTTTCTTTTCTTCCTGTTGAAAATCAATAGATTAAAAGCTCTTTAATATTGTGGATTTGTGGAATAATTGTTGGTGGATTGTTTCTTTGAGATAACTATTTGAAGGATAGGATTATTTTTTAAGT
# Right flank :  GGACCATCCCCCTCAGATGGCCCAATTACAACCATACGTTCCCTGTTTCAGTAGGAATAAATCAAAATCGTGATGGTGTTCCTCATTGCATCAGATAAAAATCTGAAAATATTATCCCGTGCTGTTTTATTAATTTCTTTGTTTTACCCTTGGTGACGTTATTGCCGGAGGCAGTGACGTCAATATAAAACTGAGGGATTAAATAGATGAAAAAGACTTTTTTGGCTGCGGTGCTGACCCTGGTATCTGGTTCTTCTTTTGCAGCAATTACTGATACTTGCCAGCAATACTTTGATGATGTTGACGCGTTGATAGTTCAGGCATCAAAAACCAGCGATCAGGCTAAACAGCAGATGGAAGCCATGAAACCTCAACTTGAGGAGGCCAAGAAACAACTCGCAGAATTACCGGCTGAAAGTCAGGATGCTGGCTGCAAACAAGGCGCTGCCGCGCTGGTGCAAATGAAACAGTCTATGGGCATTAAATAATTTATTATAAGA

# Questionable array : NO	 Score: 6.11
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-10] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [73.3-53.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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