Array 1 357058-356846 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLO01000001.1 Levilactobacillus sp. 244-2 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 357057 28 100.0 33 ............................ TTTCCCGGCAGATCCGAATATGAAAGAGCCAAA 356996 28 100.0 34 ............................ CAACGCTTCGTCCGGTATTTTTGCAGACATTTCA 356934 28 96.4 33 ............A............... TTCTTTTTAAAGGTGTAAGTCCATCTAACCTTA 356873 28 82.1 0 .........A......T.....C...TA | ========== ====== ====== ====== ============================ ================================== ================== 4 28 94.6 34 GTATTCCCCGCGGATGCGGGGGTGATCC # Left flank : GATAGCTGAGCGAATCCATTTGAATATCCATGATGCGTTTTCCTTTAAGCGTGGTGACACCGCTGATTTGAACGATGGTGCCCTTGGGAATAGTGAAGGCCTTTTTGTACTTGGTTTTAGCAAGAACAATTTTTTTCTTAGCTATCAAAAAATTCCCGGATTTTGCGTTGACGTAGCTGGTACTGGCCGCTGCTGTGACGCCACCGGTTAGGGCTAATCCGAGTCCAAGTGCACCTATGGTAACTAGAATGTTCTTAAGTTTCATATGTAACTCCTCCTAAAAATGGTACCTTAACCACTCTAAGTATACGCCGCTGAGGTGAAAAAATCTGAGGTTAAACACTGGGAATTGACGCTGGTTTAAAGTGGCTAAGGTTTTCGCTATAGCGGCAAAGAAACTGATTGTGGTTGGGGGATGGCTACAGTATGCCTAGGATACAAGTTAATTGAAAACCCGGTTTTGGTGATTTCAAAGTGCGGTGTGACGGCGTTTGTTTAGT # Right flank : ATTGTAAGTCCAATTATTTGAATTAATGTGTCATTCAAAAGTAAGAAAGCTAAGTATTTATCTATTTGTAGAATATGAGCACAAAAATATTTTTACATTTTGACAGTTAACGTTGTGCTATAATTATGGTGTGAGTTGGTGAGAACAATCATTTTTAAATGGAGGGATATACAATGAAAATTAAACATCTTGTAGCTGCCGTCGCAGTGTGTTTTGGTGTTGCAGGGATGGCTACGACTACATCAGCCGCACAGCCAGCGAGTGCCGTGACCACTAGTAATAAAAATTTTCGTAAATATAAAACCATGCCGAAAGCTTTGCGTGGTACTTGGCAAACCAAGGGATACACTAAATATCGTAAGGGAATCAAGTCTAATGCTACATATCAATTTAATAAGAACTCATATACCCTAATCATGAAGTTTAAAGGTGGTAGTGTGAAGTCTAAGACCATCCACTTCCCAAAGAGTCAAATCGGTGGTATGTGGTATGAGAAGCAA # Questionable array : NO Score: 5.59 # Score Detail : 1:0, 2:3, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGGATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,5.28 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 2 358401-358189 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLO01000001.1 Levilactobacillus sp. 244-2 contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 358400 28 100.0 33 ............................ CCGTGACCTTTTCGAGCGCTACGCCCCAGAACT 358339 28 100.0 33 ............................ CAAAAAGGCCACAATCCCAGTGGATTGAAGCCA 358278 28 100.0 33 ............................ TTATCCTCCCTGGATTATGAACTTATTGCCAAT 358217 28 82.1 0 .........A.A.G..T..........A | A [358191] ========== ====== ====== ====== ============================ ================================= ================== 4 28 95.5 33 GTATTCCCCGCGGATGCGGGGGTGATCC # Left flank : TAGGCCTTGTACAGCTCGGGATGGTTGACTACCAGTGACGTCCGGTAGTGGCGGTCGGTCATGTACTGACGGACCAATTCCATCAAAACGACGGACTTCCCGGTCCCAGCCGCGCCTTCGATGACGGCAACGGAAGCCGTGTCGCCATTCAGGCCTTGCTTGATGTAGTCGTTGATATTGGTGATGACAGTCTTCTGGTCGTCGGAAAGGTCATCGACGAAGAACTGTTCTTGTAAAATTTTATTCATACTGGAACTCCTTATGCCGTTATGGGATTTATGAAAGACAATTATTAGTATAGCAGTTATGTGGACGGATACCGTTAAATTTGCTGGTAAACTGTCGAAAATGGGGGAACTGCGAACTGAAAAAATGTTTCGCTATAGCGGCAAAGAAATTGATTGTGGTTGGGGGAGGGCTGCTGTATGCTTAGGATACAAGTTAAATGAAAACCGGGTTTTGGTGATTTTCAAAGTGCGGTGTGACGGCGTTTGTTTAGT # Right flank : AAAGGCCAGTTCTCTGCGTGAGAACTGGCCTTTTACAAACAATATTAGTTGGCTTGAGGGTAGAAAATAGCAGTTGGCATGTAATAATGCGTGCCGTTTACCAGATAGCCGCAAGAGACTCGGATGCTGCTGGTTACGTCCTTATTACGCTCAGTGGCGTAAGTTGTCGTGTAAGTTGTATACTGACGCTTAATTACCGTCAGATACTGAGCACTACCAGACTTGCTGACGCGCTTACCAATTGCGCTAGGAACGGCTTGCTTGGTGTAGAGGTAGGTTTTTCCACTGCCTGAAGGGAGTGCGGCTTTGGTAACTTTGACGGAAGTCGTGGGTTTGGGGTCGACGCCTACACTAAAGACAGCGGTGTTTGCGTAGTACTCGAGATAACCATCACTGCTGACGTGAATTCGAGCTGCTTTAGCTGTGCTTTCGTTGTTAGCGTCTGGATACTTCAGTCCGGCAAAGAGGCTGCCATCCTGAGTCGCATTTAATCCAATGTT # Questionable array : NO Score: 5.64 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCGCGGATGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCGCATGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C/E [Matched known repeat from this family], // Array 1 122087-121142 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLO01000002.1 Levilactobacillus sp. 244-2 contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 122086 29 100.0 32 ............................. CGCTGCGGGTGGCCGCTGTCGTCGTCTAGGTA 122025 29 100.0 32 ............................. GTCAAGACGGCGGCGAAGTCTTGGCGACAATT 121964 29 100.0 32 ............................. ACGCTTTTCGAGGACAAAAAGACCGAATTTAA 121903 29 96.6 32 ............................T AGAGTGTTCAGTAGCCAATACGGAAGCCGCCG 121842 29 96.6 32 ............................T TGAGTTCGCAACAATGGATGCCAACACTGTAT 121781 29 96.6 32 ............................G TTATCCTTTACGTGTGGAACGCTATAGTTCAA 121720 29 100.0 32 ............................. CAGCATGCTTTTTAAAAGCGTAAAGTTCTTCG 121659 29 96.6 32 ............................T ATGATGGTAGATGTTTTCCATCAATTACAAAA 121598 29 100.0 32 ............................. ATCTATCTGTGGCATAACAATATCTAAATCGT 121537 29 96.6 32 ............................T GATTCGCTTGACACCTTCAGCAATCAAAATAG 121476 29 100.0 32 ............................. CGAGTTTGACGACTTCCAGGAAGCCGTGCGCA 121415 29 100.0 32 ............................. GGGTGGAACTCCTTCCACCGACTATGACAATT 121354 29 100.0 32 ............................. TGGGTCCTTAAAACTAGCTTTGATTTTCAAGT 121293 29 100.0 32 ............................. CTCATCAGATAGTTATAGATCATGACAGTGTA 121232 29 96.6 32 ............................T CATCCTCCTTAATTGGGATAAATTGGTAACTT 121171 29 86.2 0 ...........A.G....T.........T | T [121145] ========== ====== ====== ====== ============================= ================================ ================== 16 29 97.9 32 GTATTCCCCACGGATGTGGGGGTGATCCC # Left flank : ACTAAGAACGAAATCATTTCCATTGGGGCAGTTAAACGTGACCGGGATGATCAACTTGTTCGGTTTGATCAGCTGATTCAGATTGAACAAGAGGTTCCAGCAAAGATTGCGGAGCTGACCGGGATTACTGATGAAATGTTGCAGAATCAAGGGGTCAGTCTAGCAGATGCTCTCCAAGGGTTACGTGAATTTATTGCAGATACACCCGTAGTTGGCTACAACCTGAGATTTGACGAGATGTTTTTGACGAACGGCTTTAGAAAAGTTAAGCAGAATGACTTGTCATCACGGATGATTGATTTAATGCCGCTGGTTAAAAAGGCTAATCGATTTCTGGATAATTATCGGCTAGAAACGGTGCTGGCTGAATACGAAATTAAAAATCCGCACCCTCATCAGGCGTTAGCAGATGCTGAAGCCACGTTTGCGTTGGCGAGCAAGTTAAAGGAAAACGGGACTTTTTGAAAAACTAAATCCCGGTGTGACGGCGTTTCTTTAGT # Right flank : ATCGAACCTATCTCTATACTGCGCTATCGCGGTATTCCCGACAGGTGTAAGGGCCTATTCATGCGGTTAAGGAGAGTCAAAGCTACATCCATCGTCTCCCTGACTGGAAATAAAAATGGTATGTTCTATTCTAAAAAAATAGAGCATACCATTTTTAGGTATAATTCTTTCCTAGAAAACGTGCTTACCACTCAAAGAGTCTCCTTAAAGGATTTATCGTTGCCGGGGGAACAAGCCAGACGCGATTTCAATTATCTTGTTGAAAGCACGACAAGCGTCTCCATGGGTTAAAGCTGGTTCTATAAGCGGCACCTTGGTTATCTACCTGAATATTTGCCGTGTAAACTCAGCACAAACAAAAAAGGAAACCCCAAAAACAAAAGGGTTTCCTCAAAAAACACAAAATCAATTAATTTTCGTCAGCAGGGCGTTCGTCCTTAGAAGCACGCTTTTGCGCGTTGTAGTAGAAGATCCATGCGACAGCCCCGAAGAAGATTGGC # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGGATGTGGGGGTGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 132873-131990 **** Predicted by CRISPRDetect 2.4 *** >NZ_BOLO01000002.1 Levilactobacillus sp. 244-2 contig2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 132872 29 100.0 32 ............................. ATCCCAATTCCATCATATCCTCGAAGATTGAC 132811 29 100.0 32 ............................. AACTTTTAATTTGGCGCGGACCGCTGATGAGC 132750 29 96.6 32 ............................A TGGCCCGACAAAAGAAGAGTTTATCGCGGGGA 132689 29 100.0 32 ............................. AATATCACGAAAACCCTTGACTTTCATTTCAC 132628 29 96.6 32 ............................C TTTCTCCAAGCGCTTCAGCATGTGTAGGCTTT 132567 29 96.6 32 ............................C TACCGGGCCATGGCGAAAGCTGAGGTTTACAT 132506 29 96.6 32 ............................C GAGCTAGCGAAGACCGTCAACCTACTTAAAAT 132445 29 100.0 32 ............................. CCAGGGGTAAGCAACTGAAGTCTCAATTAAAG 132384 29 96.6 32 ............................C GTTACTGGGGTCACAGGGGCACAGGTGATTAC 132323 29 100.0 32 ............................. CAGCAGCGTTCCAAGCTGTTTCACGACATCAA 132262 29 100.0 32 ............................. CTGGCTGTGAGTAACGGGTTCTTCCAGTGGGT 132201 29 96.6 32 ............................C TAATGTGAACAGTGGGAGTGTCTTGCTTCCAA 132140 29 100.0 32 ............................. GTGTACGCATTGAGTGAATCTGGGGGACGTGA 132079 29 100.0 32 ............................. AAGCGAGTTGCAGCTGGAAAAGGACAAGTTTT 132018 29 89.7 0 .................A...A....T.. | ========== ====== ====== ====== ============================= ================================ ================== 15 29 98.0 32 GTATTCCCCACGGATGTGGGGGTGATCCT # Left flank : AATGACTTGTTAAAGGAAGGCTTGCTGGACGACCAAACGCCACGGTATTCCAGTATTCCGGGCCGCCGCGTGGGTAATTTTAAATTTGTCATGCTGAACCAACAGTTCCAGGACCTGGGTGCACAGGAGGACCTGCCAACGCTCGACCGGCTGCTGATTGGCGGGCGCTTGCTGCTGCAGCGGATTTCATTGTCGCCCCAGCGCTGGTACGGCCTGGCCTTCAGCGACGTGGTCGAGGAGCGGGTGCCATTGTTCATTGGCCATCAGCCCGACCGGACTTTGCGGCGGAATCGGGTGGAGTAGTGATTGGTTGAAAGTGGAGCCACTTTAGACGTGAAAAATCTGAAGTGGCTTTTTTATTATTGTGTTAATTGCGGATTTTGGAGATGCCCATTTTGTAATTGTTAACGCTGCCTTGTAGGGGTATGCTAGAGAAGCAAGTTAAAGGAAAATGGTACTTTTGGAAAAATAGGATCCCGGTGTGGCGGCGTTTGTTTAGT # Right flank : CAAGCGTAATTGCTTTTTGGACTAGGCACATTTATTCACAATAGGGTAAGAGTCAGAGAAACTGGGGAAGTTTTTTATAAGGCGTCGAATTAGCCTGGTGATGGATAGAGTATGAAAACTAGGCATAGAAATGATTGAATTATGCTTGAGATAGGAGGTCACCTTTGAGGGAAATCGGAGGCGACTTTTTATTATCAAAGTAATTGCGAATTTTCAAGATAGTGTTTTAGCAATTGTTAACAGGCTAACGCTGAGGTATGCTAAAAGGGAAAAGAAAGAACATTATTGTACAGGGAGTTTAGTTTTTTTAAATTTGTGATAGAATCCAGTGATTATCAAGCTCTCGAAGAATAATTCTCAAGTCAGAGCATGTAGCTATTCAACGCAAAGGAGTGTCGGCGTATGAAAATTTCTAGACAAGCTTCAGCCTTATGGGCGAGAAAACGTTCGGAGGATGGACAGGAATATTGGTTACCTTTGATTGCCCATCTTCTTGATAC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGGATGTGGGGGTGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGTATGTGGGGGTGATCCT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.80,-11.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //