Array 1 29464-29929 		**** Predicted by CRISPRDetect 2.4 *** 
>NC_013893.1 Staphylococcus lugdunensis HKU09-01, complete sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                        	Insertion/Deletion
==========	======	======	======	====================================	=======================================	==================
     29464	    36	 100.0	    37	....................................	TTCTGTATTTCTATTAACCAATTCATAAGTGTCATTA  	
     29537	    36	 100.0	    35	....................................	TTCATCATATCCTTTTATATAGTTTTTGTTTTGTT    	
     29608	    36	 100.0	    35	....................................	CCAGTTGCTATTTTATTTGTCAACCATTTTATTAA    	
     29679	    36	 100.0	    32	....................................	TAGAATGTTTAAACAAGGTGTTTCAAAACCTG       	
     29747	    36	 100.0	    39	....................................	AACATTTTATTTACGTCTGTTTTTGCCTCTACTAAGTAA	
     29822	    36	 100.0	    36	....................................	TCGCTATTCAATAAGTTTTGTATTTGTTGTCTCATT   	
     29894	    36	  91.7	     0	..............................A.A..G	|                                      	
==========	======	======	======	====================================	=======================================	==================
         7	    36	  98.8	    36	AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC	                                       	       

# Left flank :   GATTTTTTAGAAGTATCATGATACAATTTGATGCTTTTTTTGAGTCTCATAAACTTTATGATAAAGAAACATTGGAATTTTTAGAGCAAAATGTAAATATAGTTAATTATAAATTGAAAAGTGTCCGTTTTCATATGGAAAAGGTTAAAATTCCATCTTTTAAGGGAGAAATTGTATTTAAAATAAATGGGCCATTGCCGTTTTTACAATTAGTTTACTTTTTATTAGCTTTTGGAGAATTTTCAGGTACGGGTATAAAGACTAGTCTAGGTATGGGGAAATACAATATAGTTGATAAAAATCAAGATAACTAAAAAGTAGTTACACTTCATAGTCCATTTAAAACAAATCGAATTTATAGTATAATATATATAGGGAAATAACCTTTAAGTGTCAAATTTTTTGACAAATAAGGTATTACCTAGAGTTAGATTGTCAAAATTTTTGCCAATTTAAATTATCCTTCAAACTTAGGCAATACTGGATTGAAATTAATTGCT
# Right flank :  GATGTTAATATTAAGGTTTTTAAAAAACTAGATAATAACCAAAGCGCTAACTCTGCATTTGAGTCAGCGCAGTTTGTTTTATTATTTAAAAAATTTAAATGATTTTGACAATCTTAAAAAAGGTTCTGTTGATTTTAACAAGAATTAATGAAAAGTGTTGATAGTTATATAAAAAATTGGGAGATGTTGAAATTATGGAGGAAGTACTGGATTTAATAATAAATTTAGTTAAGTTATTTATTATAGTTCCGTATTGGTTGATTAGTGTTGGTGTAACTGCCTTTTTTTATTTTAAGCTTGTCGTGTTTATTCGGAATACATTTAAAGCTTTTTTTGATAAATACTTTTATGGCGAAGACAGTGACTCTATTCCTTATGCTGTAGGTCCATATATAATGATAATAACTGCTATGCTTATTGGATTAGGAATAGTTATGGTAATTGTTTTATTTTTTAATGCACTTTTAGGGCAAAATTTGTATACCCTATTATTTATAGTT

# Questionable array : NO	 Score: 6.20
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     AATCAGAGAATACCCCGTATAAAAGGGGACGAGAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  F [-7.80,-6.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-3] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.78,0   Confidence: HIGH] 

# Array family : NA
//