Array 1 51374-51706 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDRW01000001.1 Ralstonia solanacearum strain IBSBF1900, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 51374 29 100.0 32 ............................. CAATTCTTCTCTTCCATAGGACTCACACATCA 51435 29 100.0 32 ............................. GGACGCCCCCTGGGCGAACAAGCGGGAAAGCT 51496 29 100.0 32 ............................. GCGTACCTGTTCAGGGAGCCGACGACTAGCAC 51557 29 100.0 32 ............................. GCCGTCGTGATCCGCAGGTTCGTATGCCGAAA 51618 29 100.0 32 ............................. CAACAGCTAGACGGCGCCAGCGGCACCGTTAC 51679 28 82.8 0 .A......T.-A...............T. | ========== ====== ====== ====== ============================= ================================ ================== 6 29 97.1 32 GTGTTCCCCGCGTGGGCGGGGATGAACCG # Left flank : AGGCAATGGGCTATGGCGTCTATGCGCTGGCGGAATCGGTGCAGCCGGACCAGGCCGCCGCACTGCGCCGGGATGCCCTTGCGCAGCTGCGGCGCGCGCTGGAGCTGCACGACAAGTCCGGCGTGAAGAAAGACATCGAGCGCATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGCCCATGTTTCTCGGCCCTGGCTTGCTTGCAGCGCTGCTGCTCAACAAGTGGAAGGTGACCGAACGCGGGACAGGTCCATACCCCTCTCACACCTTGAAAAAGGGACGCCTGCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCGCCGTAGTAGTGATCCCGCCCTCGAAAGAGGGG # Right flank : GTCGTGGTCAAGTAATTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGTCATGCGGCCCCCCGCAGTAGGCGCACCAGCCAGGACGTGTCGGCGCCGCCGCCGATGCGGAACAGCTCCACCACGTTGCCGCGCACGGAGAACACCGCCAGGCACAGGACGGCGGTGATGCCGTTCTGTGCCAGCAGCGCCCAGTCGTAGCGGCCGAACAGCACGCCGATGGGCACGGCGCCGGCCAGCACGATCAGGACGTAGGCCAGCCGCGCCGCCCACGGGCGGTGGGCCGCGCCGTCACGCTTGAACAGCAGCAGGCGCAGCGCGATCAGCGCGCACAGCGCCGCCTGCACGATGAACAGGGCATTCACGGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.60,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [20.0-18.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1482581-1483708 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDRW01000001.1 Ralstonia solanacearum strain IBSBF1900, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1482581 29 100.0 32 ............................. TCGAGATTTGCTCCTGTGTGTTGGATGGTCTG 1482642 29 100.0 32 ............................. CCGATCTCCCGGGCGACAACATCCTGATGCCG 1482703 29 100.0 32 ............................. GCTCAGATCGAGTTCACGCGTTTGGCGCAGAC 1482764 29 100.0 32 ............................. GTGCAGTTCCACGACGCAGTTGCCGATGCCGC 1482825 29 100.0 32 ............................. CCGCCCGCAACTGGCTTGGCTACTAATCGGAG 1482886 29 100.0 32 ............................. GCTACCTGCAGGCCGATGTCCGCGTGCGCTAC 1482947 29 100.0 32 ............................. ATGAGTCAGCAACTCGCCGATTGCTCGCAATT 1483008 29 100.0 32 ............................. TTGAGAGTCACTGAACGTGTACGGCGTGAATG 1483069 29 100.0 32 ............................. CCCTACATGGACCTGCGTGCGCCGATGTTCAG 1483130 29 100.0 32 ............................. ACGGCGTTCGCGGAGCACATCTCTGGGGAGAT 1483191 29 100.0 32 ............................. CTCGTACACTGGGGATCGAACCCTATCATCGC 1483252 29 100.0 32 ............................. GATTTGCGGCCGGACTGGCGCGAGATTTGGCC 1483313 29 100.0 32 ............................. CCTAGCGTCATGGGCAGCGAGCTATACGGCAA 1483374 29 100.0 32 ............................. CTATTCCAGCTCCGTGAACACGGCCACGCGCA 1483435 29 100.0 32 ............................. CCAGACGACGGAATGATTGCAGCTTGCTTAGC 1483496 29 100.0 32 ............................. CAGTGTTTGGCAATCGAGCGCCTCACGCGCGG 1483557 29 100.0 32 ............................. ATGAGTGGGTTACCCGTCGCGGCGGCTTTTAT 1483618 29 79.3 32 ........T...TAC.........C..T. CCCGGCGCCGGCGGGCTGAGCGGTGTGAGCCT 1483679 29 86.2 0 ...........A.A..........CG... | C [1483684] ========== ====== ====== ====== ============================= ================================ ================== 19 29 98.2 32 GTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : AGTGATGACAACGTCGCATGTGTTGTCCGGCGGCGTCGCCGAACGGCCCGCGCGGCCGGCATCGACGCTGCTGCATGCTTGCAGGCCCGCCTGTTCGTGGCGGACACCGAATCCGAGGCCCTGCAGCAGGCCGCCTCAGCTCGCGAGAAGATGCCGCCCTTCCTGGTCGAGCACACCATCGCCGGGACCCGCAATCGGTGACCGGGCCGATCGTGCCCCCGATGCGCGAGACCGGTGCCGGCCACATCATTGGTTTCTTTGCAGGTAATCCGGCAACCGCGAGGCGGCCCTGTCGTCGGATTGCCTATTGCCTATTGCCTATTGCCTATTGCCTATTGCCTATTGCCTATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTGCGGGGATGAACCGCGGGCCGAGCTATGCTGCCGGCCCGCTATGAT # Right flank : GCCAGTGGCCATCCAGTCGATGTCACGACCCGGATGCCGCTACACGCTACACACTAGTGCCAGCTTGACCGCGCCTTCCAGCCGTTCCTGCACAGAGGCAAGGGCGCAGCGCGTCCGGGCCGCTGGCGGCGACGCGACGTCGCCGCAGGGCTGGATCAGTCCGCCAGCGCAGCGCGCGCAGCGCCAATCGCCAGCTTCACCTGCTCCGGCGCCGTCCCGCCGATATGGTTGCGCGATGCCACCGAGCCCTCCAGCGTCAGCACGGCGTGCACGTCGTCGCTGATCAGGTCTGCCTTGTCGCCCAGGCCGCTGATCTCGCGCAGTTGCGCCACCGACAGGTCGGCCAGGTCGCAGCGCAGGTCGTCGCAGGCGCGCACGGCGTGGGCCACGGCTTCGTGCGCGTCGCGGAAGGGCAGGCCGCGCTTGACCAGGTAGTCGGCCAGGTCGGTGGCGGTGGCGTAGCCCTGCAGCGCGGCGGCGCGCATGGCGTCGGCCTTGAC # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [25.0-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2056929-2056229 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDRW01000001.1 Ralstonia solanacearum strain IBSBF1900, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2056928 29 100.0 32 ............................. GAAGTATTCGACGGTGCAGCCTCGGTACTCCT 2056867 29 96.6 32 ............................A AGAGGGGCCTCCACCGGGGTCACTACTACGGC 2056806 29 100.0 32 ............................. TTGCTTTGAATGCCCGAGCCGCACAGTTCGCC 2056745 29 100.0 32 ............................. ATGTGTGGATTTTTTTTCGGTCGAGCTTGGCG 2056684 29 100.0 32 ............................. CGTTGCCGTGCTGACACGGTTCTTGTGCGAAC 2056623 29 100.0 32 ............................. GCATCGGGCCAAGGGTGTCCCATCCGCGAACT 2056562 29 100.0 32 ............................. CTCAACGAAATGGCGAATCTCCGCATCTCGTG 2056501 29 100.0 32 ............................. AGCCCAGCATCGCTGGGCTTTTTCCTTTTGGT 2056440 29 100.0 32 ............................. TCACGTGCAGCCTCCATGTGGATTTCTTCGAT 2056379 29 100.0 32 ............................. ATTTTGAGTGCTGCCTCCACCGAGGCACCTCA 2056318 29 100.0 32 ............................. CGTGGACTTGAATCCCAACTGGCGCAAATGAA 2056257 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 12 29 99.7 32 GTGTTCCCCGCGTGGGCGGGGATGAACCG # Left flank : CGTGCGGCAGTATCCGCAGTACGAGCGCATCGGCCTGCGCGAGCTGTGCGACGGCATCCACAGCGTCTACAAGGCCAACGACGTGGCCCGCGTGACCACCGAGATGTACCTCTCCAACATGGAGCCGGCGATGAAGCCGTCGGACGCGTGGGCCAAGATGGCGCACCGCGAGACCGAGCGCGTGGCGATCGACGACCTGGAAGGCCGCATCACCGCCATCCTGCTGACGCCGTATCCGCCGGGCATTCCGCTGCTGATCCCGGGCGAGCGCTTCAACCGGACGATCGTGCAGTACCTGCAGTTCGCACGCGACTTCAACAAGCTGTTCCCGGGCTTCGAGACCGATATCCACGGGCTGGTCGAGGAGGAGATCGACGGCAAGGTGGGGTACTTCGTCGACTGCGTGCGGTAAGGCATTGCCGCGAGCTTTTGCCCGGCGGTAGATCGGTAGATTTTTGAGGGCCGATTTTTTGCTTTTGGATCAAGGGCTTGCGGTAAGT # Right flank : AACGTGACGTGGCCGCGCGAGTGCGAAAAGTTGTGTTCCCCGCGTGGGCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCGCCTCCGTAAGCCATTGATTTTTAAGGGGGTCGTTGAGATGTGTATAAGACGATGCGTTCAGCCCACCAGCCACCGGTGGAACCGCGGTGCGATTTCCCGGAGATCGCCAAGCCGGCTCGTGATGCCGTGGATGATGCCGACCCCGATCGCCGTCAATTTCTTGCACTTGCGCCGCTCATAGAGCAGCACACCGATCATCTCGTGCGCGAGCCGCTTCTGGTTATGTATCAGAAACGCGGGCGAATGCCGCGCATGCCGCAGGCTGAGGCTGATGCCGTTCCTGCAGCGGTAATACCGGCGCAACGCACCATGATGGCTCGGTCGGATCCGCACGCCCAGGAAGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGGGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGGGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-11.70,-13.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 4 3557626-3557776 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDRW01000001.1 Ralstonia solanacearum strain IBSBF1900, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 3557626 29 100.0 32 ............................. CGGGGCAAGAATGGAAGAGCATGGAAACTCGG 3557687 29 100.0 32 ............................. CCCCACTGACAGATGAGCAGAAGGACAAGATT 3557748 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : TCGCATCATCCCGGCTATCGAGGAGGCGCTTGCGGCGGGCGGGATCTCGCCCCCGGACGCACCCCCGGAATCCGTGCCGCCCGCCATTCCCAATGCCGAGGGCCTTGGCGACGCTGGCCACAGGGTGCAGGGATGAGCTTTGTCGTGGTCGTCACCGAAGATGTCCCCCCGCGCTTGCGCGGACGGCTCGCCATCTGGTTGCTGGAGGTGCGCGCCGGTGTATACATCGGCGACGTCTCCCGGCGCACGCGCGAAATGCTCTGGGAGCAACTGGTCGAAGGGCGTGAAGACGGCAACGTCGTCATGGCCTGGGCCAGCCCGCACGAATCGGGCTACGAATTCCAGACACTGGGCGCCAACCGCCGCCTTCCAGTCGAATTCGACGGACTGCAGCTCGTGGCCTTTCAGCCGGCGGATAAACCTGCTCTTTGACAACGCGAATAATCGGTACGTTTTGGGTGGCGGGATTTTTGGTTATTAATCAATGGGTTGTGTTAAGT # Right flank : TGAATCCAGCGTATGCGTTGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCAGACCTTCCCTAGAGCGAGGGTGACAATTGGAGAGAGCGAATGCGCATTTGTTCGTTCTTGTTTCAATATGAAACGCTTTTATTGCGCAAGGTGATTTGGTCAGAACAGGGCTTTTTGGTACATTTCCTCACCTCAGCCGTTCAGCACAGGCGCAGCGAATCATGACCACGACTTACGCGAACGCCGATCCCGGCGAACTCGAAAAATTCAGCGAACTCGCCCACCGTTGGTGGGACCCGAACAGCGAGTTCAAGCCGCTGCATGAAATCAATCCGCTGCGCCTCGACTGGATCCAGTCCGTGGTGCCACTGGCGGGCAAGCGCGTCGTCGATGTCGGCTGCGGCGGCGGCATCCTCTCCGAAAGCATGGCGCGC # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-15.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 5 5807424-5807212 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDRW01000001.1 Ralstonia solanacearum strain IBSBF1900, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5807423 29 96.6 32 ............................T CTTGAGCAGCGCCGATGTGCTACCGGGTGCCG 5807362 29 100.0 32 ............................. GCGCTTGGTGCGAAGTTGCTCCCGGACATGGT 5807301 29 100.0 32 ............................. CAAGCCCGATGTGAGCCATGTGCGCCCTTTAT 5807240 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 4 29 99.2 32 GTGTTCCCCGCGCCTGCGGGGATGAACCG # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACGTTTACAAGCCACCTAACGATGACCGTCGCGCTGAATAAATCAGTCTTTCCCTAACTCATCAGCATCAACGTATCAGACCCAATCAATTGAGCCATCTTCCATTACCCACCCAATCCCCGCCGGACACAATTCCGTAAAAAACCATACACCTTTATTCACATCCTCGTCACTCTGCGGAAATGCGCCATAAAAACTCTCGACCACTTTATCGATAGGATCATCAATAACCCTTCCATTCTTTGCCAATTTAATAAGACCATCACTCACCATACGCTTAGGCATCCACAAAAACCTGCCCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTGTCCCCCGCGCCGGGGGGGATGACCCGCCGACAGATCTACTGATTCTTCGATTAGCTTC # Right flank : TCCATTCCAACGTGCAACTTGTCGCCGTCGCGGTGTTCCCCGCGCCTGCGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGGGGAAGTTGTTGACGGCGCGGTGGCGCAGGTTGACGACGATGTGCTGGCGCTGCTCCGGCTCACGGCCATCCATTTCCGGATGACCGGACGGGGCGAACCACGTGCCGGGCGGCAGGTTGCGCACGTCGCTGGCGCCGTGCACGCATTCGGCCCGGTGCTCATGGGCCAGGATGCGGGCCTTGGCCAGCCGCGTGTGGTCGTCGCGCGAGTCGCCCGCGTGCGGCGGGTCGATGACCCAATCCGTGAGCAACGCGGCCAAGTCGTTGCCGGCCTCGCCCTGATCGATGATCGTGTCGAACTCCGCCACGTCCATCTTGCCGGTCTTGTAGTCGCNNNNNNNNNNN # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCTGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [28.3-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //