Array 1 49802-51172 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUMO01000012.1 Pseudoramibacter porci strain RF-744-FAT-4 seq12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 49802 29 100.0 32 ............................. ATCACCGGCATCAATCAGAAGCTGTCGACGGA 49863 29 100.0 32 ............................. TTTCGCGAAGTCGATACCGACCACGCACGTCC 49924 29 100.0 32 ............................. CAGTGCGCCCGACGCGAAATTGGCTTTGCTGT 49985 29 100.0 32 ............................. CACACGGCCGCCCAAAAATGGGCGGTCATTTC 50046 29 100.0 32 ............................. AAAAAATCGCAACAGTGAGCCGGGGGCGTCTG 50107 29 100.0 32 ............................. TCCAGCGACGTGGTGTTGACCGCAATTTCGAT 50168 29 96.6 32 ............................C GCGCCTGCGATGGAGTCAGCATATAAAGTAGA 50229 29 96.6 32 ............................C CTGATCGGTATACCATTTCTGATCTTTTTGCA 50290 29 100.0 32 ............................. TTCGCAGGTCACCGGCACCACAAACCGACTAG 50351 29 96.6 32 ............................C AGGGACCGCGTCGTCCGGTACGAACGACGTCA 50412 29 100.0 32 ............................. GGACCCCAGCGACGCGCCGAGTACCGCCGTCG 50473 29 100.0 32 ............................. TTTTCCGATTTCAGAAATCGCGGATCCGTTAA 50534 29 96.6 33 ............................A TTATAATCGCCCTCAATATAGAGGACCCAGAAA 50596 29 100.0 32 ............................. GTGACCGCCCGGCGCACGCTGACCGTTTTGTT 50657 29 100.0 32 ............................. TTGCCAATGTACCCCAGAGGGGTATATGAATA 50718 29 100.0 32 ............................. CTACAAGCTGCCGCCTTCGGTACGCGGTGAGC 50779 29 100.0 32 ............................. GATTCTGCCTTTTCCGCTTTTAGCTGATAGCT 50840 29 100.0 32 ............................. AAGGCCGCGGCAGCAAGGCGCCCCGCGGCCGT 50901 29 100.0 32 ............................. ATCTGCCTGCCTGACGTCGCGTATCGGCGCGC 50962 29 100.0 32 ............................. TATAGCCTCGACATCGGGGGCGCGTCAAGTCA 51023 29 100.0 30 ............................. AAATCGATTACGGCACTAGTACGACACTTA 51082 29 89.7 32 ...........GC...............C TTAATGTCAATCCGTACTTTCTAAAAATCGAA 51143 29 75.9 0 ......T.T...C....A..AG....T.. | A [51167] ========== ====== ====== ====== ============================= ================================= ================== 23 29 97.9 32 GTGTTCCCCGCATACGCGGGGATGATCCT # Left flank : TTGAGCAAGATGCTATTATTGAGTTTGGTGCGCTGCGCGTCCGGCATAATGTCCCAGAAAAAGGCTTCAGCCAGCTGGTGCGAACCGACCGGCCGCTATCGCCTGATATCATCGAACTGACAGGCATCACCCCAGAAACAATGTTGAAAGAAGGGACTGAACTTAAATCAGCCTTAACTGCATTTCTCAAATTTATCGGAAAGGATCGGCTTCTGATTTACAATGCTCATTTTGATATGGGATTTCTGATGCATGCCTGCCAAACCTGCGGCATCGAAGCACCCACCAACACTTGCGTCGACGTCATGAAAACAGCCAAACAGCAGTGGCGGTTCAGTCCAAATTATAAACTCGAAACCCTTGCCACGTTTTTTGACTTGCCGCAGCAGGCGCATCGTGCACTCGACGACTGCGAATTAACCCATCAGGTTTATCAGAAGTTAAATGAAAATGGGATCCAACAAAATCAGGAACACTGAAAAATCAAGTGTTTCGTTAGT # Right flank : TATTGTAAATCTTCGCCCTACTAGATCGCAGTTAAATTTTTATATATTCCCCGCTATTTTATCTTTCACCACGCCCAACACTTCCCTCAGCATATTATTCGGCAGGTACAGCGGGGTTGAGGGTGCGGCGATGCCGTACACATGGCGGTAGCCGGCCTTTTTCGCAAGGCGCAGTCCGCGATAGACGTGGAAATTATTTGTCACAATGCCGATGTGGTCCGTCTTGATCTGCATCAGCCTGGCCGAATACCGGATGTTCTCAACCGTGTTCTGCGACCGGTCTTCCATTTGGATGCGTTTCGGCGCAATGCCTTTCCGGATCAAATACCGGCGCATGGCCGACGCTTCGGTTTCCGGCTCGTTGGCGCCGCGCCCGCCGGAGACGATGCACTGCGTTTCCGGATGCGCCTTGAGATAATCGGCCGCTGTATCCAACCGGTAGGCCAGGACCCGGCTCGGCCCCGCCGCTCTCACCTGGGCACCGAGCACGACGATCGCGT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGATCCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATACGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //