Array 1 86225-85680 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPF010000100.1 Trichocoleus sp. FACHB-40 contig100, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 86224 37 100.0 32 ..................................... AAGTATTTGGGCTGCACAGTCGTCACCGTCAC 86155 37 100.0 36 ..................................... ATAGTTGATCGTTAGCGTGGCGTTGGCGGCGATCGC 86082 37 100.0 38 ..................................... TCGAAGGTTACGGGTGTTTCTACAAATGTTTTTGGGTT 86007 37 100.0 33 ..................................... GCGTAACTTTGGATACTTGGATTACTCCTAACT 85937 37 100.0 41 ..................................... ATTGCAGAAACCTGTTATGGCACAGACCGCAGACCCAGTTC 85859 37 100.0 32 ..................................... TATGGGTGTAGCGGACGAACAAGAACGCGAAG 85790 37 94.6 37 .......A............................C GCGATATCCACACCAGCATCCAGCAAGTCTCCCGCAA 85716 37 94.6 0 .......A............................C | ========== ====== ====== ====== ===================================== ========================================= ================== 8 37 98.7 36 GCCGGAAGACTCCTAAATCCCTATCAGGGATTGAAAT # Left flank : AAGAGTTCCAGCGAGTCAAGGGAACCCTAAGTATAGGCGATCGCGTAATCAAGTTGACTGATGCCAAGTTAACAGGCGACCGTCTCAGTTTCAAGACCGTGGAGTCGGTGAATGGAACTAAGGTAACGATGCAGTTTGATGGGAAAATTCAGGAGGATGCGATCGCTGGTAGTGTCGATTTGGGTGGCAATGAAGCACAGCGCCGCGATTGGGTAGCCAAGCGTCAATAATAAGCGCGATTTTTAGTTCAGTGCGTCAACCTGTAGGTGTTGAAATTCACCAAAGCTAAAAAATGGCTGAATCCTTCTGTGGGTAAGGATTTAACTGATGCAATCAAATTTTACGGTTGACGCATCTGCTGTATTGCTCTCGCACCGAGCTTTTCAGACATTTTCACTAAATGAGACTCTTGCCTAATCCGCGCCAGGATGATAAGATTCCACAGATTGACGCAATTGCACCTCGAAAACTACATACAGTGAGCCTTTCAGATATCGGCC # Right flank : GTCGCTATCTCAAAGTATGCACATACTTTCTCAGGAATGTTAACTTATAAGGAAGGAAAATATACGCATATTTTCCCAGATAGCGCAACTTAGCTGTCTTGAAAGGGATTGGGATTAAGATTGAAGTAGTTTAAGTAGAGGAACTGTATGCCCCGCGTAAAAGGCGTTTCAGCCGCTGGCGATGACAATCTAAAAAAGCGCTGGAACTTCAGCCTCACGCAAATAGCGCGGGATGGTATCGGCAGACTATTCAAGTTCTGGGGATACCGAGACGCATCAGCTTTATTAGAAGCGCTGGGCAAGGGTGAAATATTCTTATCCAAAGACCCGCCCACGCTTGCAAGTCTCTTGGCAGCAAAAGATTTGATTGAAGTGCATGAACTCTCTGATATTCCACTGCGGCGGCTTAAGGAATTCCTAGCTGGCGCTTTACCAACGGTAAATGAACTTATGGATCTAGAAGATGCGCTAGAGGTGAGTCAGGAGAATCTGATGCAGAT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGGAAGACTCCTAAATCCCTATCAGGGATTGAAAT # Alternate repeat : GCCGGAAAACTCCTAAATCCCTATCAGGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : NA // Array 1 51154-52470 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJPF010000043.1 Trichocoleus sp. FACHB-40 contig43, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 51154 37 100.0 36 ..................................... TTAGATACCTAACCAAGACAACTTAGAATCTATAGC 51227 37 100.0 33 ..................................... AGGAATTAAGTCTTCTATTTTGGCTTGGATAAT 51297 37 100.0 34 ..................................... AAACCCACAGGCAGCACCCAACTTGACCCTGTGA 51368 37 100.0 32 ..................................... CGGTTGCGGCTCTGTCTCTCCTGATCGGCAAT 51437 37 100.0 34 ..................................... ATAAACCAACCTTTGCTTTAATGTTCCAAGTTGA 51508 37 100.0 33 ..................................... CTGGGGAATTAGAATAAATAAGGAATCTTAAAA 51578 37 100.0 37 ..................................... CTTTGGTAGCCCAACCCTTGTCAGTACGCGCTCGCCC 51652 37 100.0 36 ..................................... AGATTGGATTGACCCAGGTAGAGGGCAAACCCCAAA 51725 37 100.0 37 ..................................... GCAACTGTTGGCCCTGCCAATCCTGGTTGACGCTGGA 51799 37 100.0 34 ..................................... ATTTTTGCACCACGCAGAGAACACAGCCGTAAGC 51870 37 100.0 34 ..................................... GGATGCAATCTTTACGACTTTCCCGACGTGCAAG 51941 37 100.0 34 ..................................... TCCCTAGAGTCCGGACACCCAGAATACTACTAGG 52012 37 100.0 34 ..................................... TTTCTCACGAGTGACTTCGATAGCTTTAAGCCAG 52083 37 100.0 37 ..................................... AGGATCATTTTAGAAATGGGATCGTTTCCGAAAATCT 52157 37 100.0 33 ..................................... ATGCTTGAACCGATGCGGTACAGGCGATCGCTA 52227 37 100.0 35 ..................................... CTCGACAATACCGCAAGTTGGACTTATACACTCGC 52299 37 100.0 34 ..................................... TTCGTATTGCCCCGGACGATGCTTTTTTTCTGGG 52370 37 100.0 27 ..................................... AACTTGTAAGAATGTCTACTTGTCCAA Deletion [52434] 52434 36 75.7 0 .T............-TT.G..G.C...C...G..... | T [52459] ========== ====== ====== ====== ===================================== ===================================== ================== 19 37 98.7 34 GCCGGAAAACTCTTAAATCCCTATCAGGGATTGAAAC # Left flank : GTTTGGAATACTACCAAAATATTGCCCCAAGACAAGTTTCCTGGGCTGCTTCTTAATGCTTTGTTTGGTTATACAGATAGGCTTTATCGGGTGCAAGCGATCGCTTACGTTCTATTTTTAGTCAGCATCGGCGGCATTTATTTGAACAGTTTAAAAGGTCGCCCCAAGGTAGCAGCAGCGAAGCATGAATCAGTGCAAAACACAATCAGTTCCGGGCAGGAATAAACTGTTGGTTTTTTGTTCGCCGCTTGCGTCAACCTATAGGTGTTTTTGTGAAAGGGTCGATTTTTGTGGCTGAAACGCTTATCCCGTTTGAATTTGAGTCGGATGACACCATTCAAGGGGTTGCCGCAAACGCTGCCATTTACGCTGTGGCTTGCTTTGAAGCGATTTATAAAAACGCCATCTTGACAACCCGATTCCTGAAACGGTACATTGACTCTAGGTTGACGCAAACGAACCTTGAAAACTACATATATCAATGCTTCCAGAACCCGGCA # Right flank : CAATAGGGGAAGCTCATCCCGTAGCGTCTAGAATTAACCATCGGAAATTTGGGTAATCAGTGCCAGCATCTTCTCAAATGCCCAATTTGGCGGTAAGTTGACATTGCGGGGGATGGGATGAGACTTTGGCATGAATGCAAATCAAGATTTAATCAGAGCAGCTAAAAAGGGCGACATCAAGCGGATACAAGCATTACTCCACCAAGGCGCTGATGTTAATACTACCGATAGAGAAGGCACCACTGCTTTAATGTTTGCCGCCCAAAACGGCAACACCGAAATCGTGCGGATGTTGCTAGACAAAGGCGCTAATATCAACCTTGCCAGAAAACAGTATGGTCTGACAACCTTGATGTTAGCAGCGGCGGCAAATCAGGTTGACGTGGTGCAAGCTTTGGTGGCTAGGGGCGCTGACGCGAACGCCAAAAACGAAGATGGAAGTACGGCGCTGATGGTAGCGGCGTTCAAGGGTCATGCTTCCGTGGTGCAAATTTTGCTAG # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCGGAAAACTCTTAAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : NA //