Array 1 7711-8001 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNAT010000038.1 Clostridium sp. 1001275B_160808_H3 NODE_38_length_20101_cov_38.3967, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 7711 30 80.0 36 A...C.A......C.T..........G... AATGTTAATTTGCTAGCAGATAGTAAAGCTAAAGTA 7777 29 96.7 35 ................-............. AGGGTTGAAATGACATTAGATAGATTAACTAAAAC 7841 30 100.0 35 .............................. AAGAAACTTGTTAATAATACAGATTTTGATATTGT 7906 30 100.0 36 .............................. GATTCAAATATAGTTTTAATTGAACTAACAAGATCA 7972 30 86.7 0 .......T...........GA...C..... | ========== ====== ====== ====== ============================== ==================================== ================== 5 30 92.7 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : TCTACAAAGGTGTAATTTCTTAATTCAGGATTATCAACATTTTTACTGTTATCAGGAATTTCAATTTTATTTTTATCTTCTATAATGTTATTCAAAGTAGTATTATTAGTTTCTTCATTAGTATCTTCAGTTATAATTGAATCGTTATCTTCAGATTTACTTTTAAGTTGAACTTTATTGCAACCAATTAAAAATATACTTAATGTACATAGTGCGATTAATTTAGAAAATTTCATTTGCAACACCTTATTACAAATATTTACTTTAAATATATTATATAATAAATATTATGTTTATTCCATATAGAATTAATAGAATGTAGTTTTACAAAATATGTTATAACTTATATAGAGATAGAGTTTAATAACAAATATTAAATATTTATAATTAAGGATGGTATATAAATAAATTTCATTCACTTTTAATACGGATGGTAAAAGTCTTATTAATTCTAGTATTTACATGGATTTTGCTAAAATATATAATTTAAGAAACACTTA # Right flank : TCTCAAAGGACCTCGCGTTTCGCGAGTCCCTTTGAGATTAATATTAAGTAATAGTACTTTTAGTATAGTTTCAGATATTTTATTAAATTATAAATGATACTTTATTTAAATTTATAATATTTGTTTTAATGATGTAACCTATATGAAGTTCTTAAAATTAACTCTTAAAAAATATACTCGTAAATGATAATAAAAAATAAAATAAATGGAATACATAATATATTCCAAATTGTGGTATAATTATCAAAAGAAGTGTAATATTTATATATTTAGATAAAGAATAGATAAAAAATTGAATTTTAAAAATTACAATAGAAAAACTATTAAGGGGGGAATAGGTATGAAATGGTTAGTTACTTTACTAGAACTAGTTATACCAATAGTTTTAGTAATATTTATATTCAGAGTATTGATTATTCAAAAAAGACTTAAAAATGAAGTGAAAAAATTAAATATTCAAATAAAGGAAATAATAGATAAAAAAAGTGAGGAGGAAAAAT # Questionable array : NO Score: 5.62 # Score Detail : 1:0, 2:3, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.41 Confidence: LOW] # Array family : NA // Array 1 108837-109782 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNAT010000013.1 Clostridium sp. 1001275B_160808_H3 NODE_13_length_109871_cov_40.5877, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 108837 30 100.0 35 .............................. TTAAGTCCTTTATAGATAGCGTATCCTGCTCCTGC 108902 30 100.0 34 .............................. GAAATAACAGTTGAATTAATGTATAAACTTTGCA 108966 30 100.0 35 .............................. GTAGTTTCATAAGCTATTTCATTTCCATCTAGTAA 109031 30 100.0 35 .............................. TCATATTGTTTATTAAAATAATCCTTACACATTTG 109096 30 100.0 35 .............................. TAGTGATTGAATGGACTTATCTTTCTTTTAATTGG 109161 30 100.0 36 .............................. GTTATCTCTATATCTGTACTTTTAATTTCGTTTTCT 109227 30 100.0 36 .............................. AGAAACTCTTCATCTTCCTCATAGCACTTTCTCATT 109293 30 100.0 36 .............................. TTATTTTTAACCCCTCTTTCTTAATTCGCGATAATA 109359 30 100.0 36 .............................. TTGGTTCTGAATTAATTGATACATTGCCAATTATAG 109425 30 100.0 35 .............................. TGACTTCCCCTTGCTCTATTGTGCCTTATTGTAGA 109490 30 100.0 36 .............................. TAGGTTTTGTATCCTGTTCAGTACCAAAAGGCGATG 109556 30 100.0 36 .............................. GTTAGTAATACAAATTCCTTTTTACAAGTTTTACAT 109622 30 100.0 36 .............................. GTTATTAATCTTGTAATTTCATTATAGGCCATAGAT 109688 30 100.0 35 .............................. TAATCTTTAGCTTTAGCAGGTAATACTTTATCCCC 109753 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 15 30 100.0 36 GATTAACATTAACATGAGATGTATTTAAAT # Left flank : ATTAATTGCTTGTCTGGAAACACCTACAAGCTTTCCTAATTGCTCTTGAGTTAAACCCAAATCTTCACGAAATTGTTTTAATTTATTTTTCATCAAATATCACTCCTTGTAATGTTTACCTTACATTTCTAATTTAGCATTTCTTTAGGTGAGTGTCAAGCTAACCTTACATAAAATGTGTGGAAAGTAGTAACAATTTTTATATGATTTAGTATTATATTCATTTGAATAAATTATAAATAGACTTATTATTCAGATTGTAAAGGTGGTCGCGTTACGCGACCCCCTTGATATTATTTGGAGTGTTAAAAAACATATTAAGTATTTTTACCAAGTTATTATTTCATGAAGTATTTGAAAAATAAGTTATATTGCCAGTTTAGGCTGTCATTTATATAAAGTTTCTTTAATTTAAGCAAGGTTGGTAAAAAGTCTGGAAAGTGAGGTATTTACAAAGATTCCTTAGGATTGTATAATTTATGAAAGGCTTAAAATCAATG # Right flank : AAGTACGCAATATGAGTTGGCTTGATTGCGATGTTGAGTTAAAAAAATAGCATATATATAAGCATTTACAAGTGGTTTAAACTTGGTTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATTAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //