Array 1 277322-278809 **** Predicted by CRISPRDetect 2.4 *** >NZ_LBKY01000015.1 Streptococcus agalactiae strain BE-PW-078 ctg7180000004697, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 277322 36 100.0 30 .................................... AAATTCACCAGTTACAAATGTCAATTCGCT 277388 36 100.0 30 .................................... TATTATACCATAAAATATTGAGAATATAAA 277454 36 100.0 30 .................................... TTCCCCTTTTTAATAGTGTAAACCGTTTCT 277520 36 100.0 30 .................................... AGTTAGAACACTCACTTTTGTACCAGTAGT 277586 36 100.0 30 .................................... AATATAAGTATAGGGTTGTTTGCGATCCTT 277652 36 100.0 30 .................................... AAGGGTGTGTGATAACTTCATAATCGCCAT 277718 36 100.0 30 .................................... AAATTGGATATTCTTTGTTTGGTTATTACT 277784 36 100.0 30 .................................... TATGTCTTCTAACAGTTGCTTCTTGTGCTT 277850 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 277916 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 277982 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 278048 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 278114 36 100.0 30 .................................... ACCGTTCAAACTTCTATTGGGAAATAGAAT 278180 36 100.0 30 .................................... AAATTCAATTTCGTGGATTTGGCAACTTTG 278246 36 100.0 30 .................................... CAACGATTTGCACAATAATCCAGGATAATT 278312 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 278378 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 278444 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 278510 36 100.0 30 .................................... ACATAACGTTCAAAAGTTTCCACTAATAGC 278576 36 100.0 30 .................................... TCAAACAACATTGGTGATCTTATTGCGGTA 278642 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 278708 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 278774 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 23 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //