Array 1 12099-9162 **** Predicted by CRISPRDetect 2.4 *** >NZ_LWQV01000027.1 Streptobacillus moniliformis strain CIP 55-48 contig_6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 12098 36 100.0 30 .................................... AAATGACATTGAATGGAACCATGACCCAAA 12032 36 100.0 30 .................................... CAATTTATACATACGAGTTAAATTATGAAA 11966 36 100.0 30 .................................... AAAATAACCCTAAATAAAGTATGATTATAA 11900 36 100.0 29 .................................... CCGTTGACGGTTGAAACAAATGAGAAAGA 11835 36 100.0 30 .................................... ACGTTCCAGTATACACATATGAGTTGAATT 11769 36 100.0 30 .................................... TGTTTTTTTAGTCCACATTCTGTTTGGACC 11703 36 100.0 30 .................................... AATTTAGAAATAATTTTTGGAATAGACTGG 11637 36 100.0 30 .................................... TTCATTTTTTTATTCTCCTTTCAGTTCTAA 11571 36 100.0 30 .................................... GAATGATAAAAAGAGAAAATGAAATTATGA 11505 36 100.0 30 .................................... ATTCCAAGTAAATAACATGAGAACAAAACC 11439 36 100.0 30 .................................... TTATAATAACGCAAGGATTTAGGACGGTAT 11373 36 100.0 30 .................................... AAAAAGAACGGGATTTGTATGAAACAAAAA 11307 36 100.0 30 .................................... CATATTTAAAATAATTAACGCTTTTATCAG 11241 36 100.0 30 .................................... TAAAAAAAGGAAGGAGTTTAAAAGTGAATC 11175 36 100.0 30 .................................... CACGTTCGTGCAAATTGCAAAACAAAGAAG 11109 36 100.0 30 .................................... TTAAAAATTTCAATATTTACAAAATAGTTG 11043 36 100.0 30 .................................... ATGGAACGAGTGGGAAGACTTTATTACTGG 10977 36 100.0 30 .................................... AGTACGTTTGTCGTTTTATTTATAACTTTT 10911 36 100.0 30 .................................... AATTTGATAAATGGAAGTAGTTCAATAATA 10845 36 100.0 30 .................................... AAAAAATGGATTACACTTATAGTTCGAAAA 10779 36 100.0 30 .................................... ATTCTGCGTTCGACAAATATATCCGGACTA 10713 36 100.0 30 .................................... TGAATAGAATAGAATTACAGATTTTTGGGA 10647 36 100.0 30 .................................... CTACTATGTCAAATATAAAAATACCGTTAT 10581 36 100.0 30 .................................... AAAATATGGATTACACTTATAGCACAAAAA 10515 36 100.0 30 .................................... ATATAAAAAAGGAAGAGACGGACCTCTGTC 10449 36 100.0 30 .................................... TTTTTATTTTTGTTAATTCTTCATTCGCTT 10383 36 100.0 30 .................................... TAACACCTGTATTAAATAAAATTAAAATGG 10317 36 100.0 30 .................................... TTGTAAACAATTTGTTACATGAATTTAATG 10251 36 100.0 30 .................................... TTTTTTAGTAATTTTAAATACATATTGACT 10185 36 100.0 30 .................................... ACCTTTTTTAGATGCTTTAGTTGACACAGA 10119 36 100.0 30 .................................... GAAATTTTACAGCAACAATACCAAACTTAA 10053 36 100.0 30 .................................... GGAAAATTTGGTCTAAAAAGTTTGAAGAAA 9987 36 97.2 29 .............................A...... TGCTTTAGTTGACATAGAAGGTAAAGAAT 9922 36 100.0 30 .................................... GATTTACAATAAGAGTTCCTGTTGATGTAA 9856 36 100.0 30 .................................... AAAAAATTTACAAAGAGTTTAAAGAGATCG 9790 36 100.0 29 .................................... CATTTAAAAAATATTCTAATTCATTCTTA 9725 36 100.0 30 .................................... ATGAAATTTTGGAAGAAATAGCAGAAGATA 9659 36 100.0 30 .................................... CTTTTTGTAATCTGCGTATATCTTTGTTAT 9593 36 100.0 30 .................................... AAGAGGTAGATGAATAGTGGCTGGGATAAA 9527 36 100.0 30 .................................... AGAAACCTAGTAACTTAACTTGGCAAGAAT 9461 36 100.0 30 .................................... AATTTTGATTATTTCAATACTGCGAGAACG 9395 36 100.0 30 .................................... TTCAATACTGCGAGAACAATGCAGATGAGA 9329 36 100.0 30 .................................... AATTTTGATTATTTCAATACTGCGAGAACG 9263 36 100.0 30 .................................... TTTTTTAAAAAAAAAGGCTTAAAAATCTGA 9197 36 77.8 0 .............AC.......A...G..T.TTG.. | ========== ====== ====== ====== ==================================== ============================== ================== 45 36 99.4 30 GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Left flank : AAAAGTTATCTAAACTTTTTAGAAGAAGGTAATGAAATGCTGGCTATACCTGAAATAATAAAAATAGATTTTTATGACCTTTTTAAAGAGTTATAGAGAAATGAGATTACTTGTTTACTTTGATTTGCCAGTATCAACTAAATTAGAAAGAAAACAAGCTCAGGATTTTAGAAAAAATTTGTTATCTGAAGGATTTATTATGATGCAATTTTCTTGCTATTCAAGATTTTGCAGAAATGATGCTGAATCTTCAAAATATTTTAATAGAGTAAAAAAATTGAGTAATAAATTAAGTGGTGGAGAAGTAAGAATTTTAAAAATTACTAACAAACAATATGAAAATATGTTAATATTAGTAAAAGAACCTAAATTATCTGAAATAAAGCTTTCAAAAAATCCATTGGTTATTTTTTAGTGTGAATTTTGTGCTAATGGATTGATTATTTAAATTTCAAACTGTATTTTCTAGCAATAAAATTATATTAATTTCATTGCTAGAG # Right flank : TTGACTTTTTTAAATATTATGCTATAATAATTGTGTAGATAAGATTCACATTATTCAAGTTTACTACAGATTCTGTATTAAGATACAAAATCGTAAGACTGGCTGCCTTAAGCAGCTTTTTTTATTTTAAATAATTCTTAATTATGTCAAATTCTTTTTCTTTTCGGATTTTCTCTATTTTATTTTCTATTTCTTTTTCTGAATAAAGGTATACTTCATCAATAAAATTAATATATCTAGGTAACTCAACTAGTTTGTTATTATCAATAAATAATACTTTGTGTCCACTAGAAACTAATTCATATACTATATCTTCATTTTTCACAAAAAATATACATTTTGTATTGAAATCCTTTATTTTAGATAATATATATGATACTTTTTCAAAAAATTTATTCTTAGTATAAATACTATCAAAATCATCAATCAATAATACAGTGTTATCATTTACACTAATTAATCTATTTAAATATATTTCAAGTTGTATATTTACTTTTTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATACAGATTCTTGGTAAATTTGAATAATGTGAATG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //