Array 1 1-568 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849370.1 Acinetobacter sp. CIP 102082 acLsz-supercont1.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1 28 100.0 32 ............................ TGAAAATCAACCAAATGTTGAATCAAATGCCC 61 28 100.0 32 ............................ AGGATTTTTCTTTCTTATCCCATTTAGCGCCA 121 28 100.0 32 ............................ CAACCGTTAAAACAGACAAACCAACTATTAAA 181 28 100.0 32 ............................ TTTACAACTCCAATTGCATAAGGATTGAAATT 241 28 100.0 32 ............................ GATCAAAGACGTTACGAGAAAGAAGTTAAAAA 301 28 100.0 32 ............................ TGATTGTAAACAAACATATCGTGATGAAAATG 361 28 100.0 32 ............................ TCAAAAATGTTTTTAGGACGAGCTAATTAATC 421 28 100.0 32 ............................ AACGTTTACATGGGCAAAAATCAATACACTGT 481 28 100.0 32 ............................ ATTTGCAAATGCTGTGGTTCGATTTGAATCCC 541 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 33 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : | # Right flank : ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 6165-6612 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849370.1 Acinetobacter sp. CIP 102082 acLsz-supercont1.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6165 28 100.0 32 ............................ AATTTTCTTCATCAATTCTGCGAACGCCGCAA 6225 28 100.0 32 ............................ CCAGACCGTAAATGTCAATTGGGACAACTCAT 6285 28 100.0 32 ............................ TTGCCCAAGAAGATCAGCTACCCAGGTTTGCA 6345 28 100.0 32 ............................ TTAACAGCAATATCGTTACTTTTAAATACTAA 6405 28 100.0 32 ............................ AAGTATCACAAGGTCGCATCATGGGAGCCGCT 6465 28 100.0 32 ............................ AGCCCATTATAGCCGCCGATGCAGCCACATTG 6525 28 100.0 32 ............................ ATCAGGAAAATGCTCATTGATGTTATCCGCAT 6585 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 8 28 100.0 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCA # Right flank : AGTCCACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [3.3-5.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 15374-15639 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849370.1 Acinetobacter sp. CIP 102082 acLsz-supercont1.10, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 15374 28 100.0 32 ............................ AATACGCGGAAATTGAGCAGGTTCGGCAGGCT 15434 28 100.0 32 ............................ AAAAAATCAGCGTGAAAGATTGCATTATTTGC 15494 28 100.0 32 ............................ TGGCTTTGTTTCACCCCTCCGATAAGCGTTTT 15554 28 100.0 32 ............................ TAACTGTTTAAGTGCTGATTCAATGATCTTGG 15614 26 82.1 0 ..........-..-...A..C......C | ========== ====== ====== ====== ============================ ================================ ================== 5 28 96.4 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCTT # Right flank : CACAAGGTAATAGCGCTGGGTGATTTTCATCTAGCTCTGAAACCTGACTAATAATTTTTCGGACGGCTTGAAACTTTCTAGCACCATCACTTTGCATAAATGCTTGCAAATGCGATGTAGGGGAAAATAATTCTCGAATAAAAACTTTACTATGCCAGACATCTTTTTCAACGAGCTTACTCGCCAGCGTTGCAAAAAATGTTTCAAGTTTTTGTGTCGGAGGGAGAGGGCTATCCACGAGCGCCAATAACTGTTGTTCGTTGATATAATGTGTATGTGCTTCAGCCAACACAGCTCTATATAACCCATCACGACCATCAAAATGATAGTTAATCGCAGCTAAATCGACCTCTGCCAATTTGGCAATTTCTTTGTTTGTTGTCTGAGCAAAACCATTTTGGGCAATTAATTGACCTGCTGCCTCAAGAATTTTTGATTTGGTAATATCACCATCACTGCGCCTAGCTCTAGACATTTTTTACTCTGAATCAAACTTTAAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [3.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 1573322-1572814 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849372.1 Acinetobacter sp. CIP 102082 acLsz-supercont1.12, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1573321 28 100.0 32 ............................ TGTGGAAAGATCGGCATTAGTTTCGCATACCA 1573261 28 100.0 32 ............................ AATTAAAAAACTCCGATATATGGAACGCCTAT 1573201 28 100.0 32 ............................ ATTTATGCTGCTCAATCATTTGCGCATCCGCA 1573141 28 100.0 32 ............................ ATTGGGTGAAGTCGGTGGCTTTGCTTCTGGAT 1573081 28 100.0 32 ............................ TTTCAAATGATTCATGCATAACAAGCTCCTTT 1573021 28 100.0 32 ............................ ATAAAAAAACCGCCCTTTCGGACGGTCTCTAG 1572961 28 100.0 32 ............................ ACCAATAATGCATATTGAGTGGGGTTCTGTTT 1572901 28 100.0 32 ............................ ATAGGTGGGCCATGTTGAGAGTGATGTATAAA 1572841 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGCATAGGCAGCTTAGAAG # Left flank : GACGTATTTGGGTTGGTCGAGTAAAACTGTATATTAGTGCGCTACGATTAGAAGATGGAGAACTTTTACTTGTTGTTTCTCCTATGTTTAATGCTTCTGCTATTCGTGATTATGCATTACGCTGGGAAATCGAAACCTTATTTAGTTGTCTCAAAGGACGTGGATTCAATCTTGAAAATACTCGTTTAACAGACCCTGGACGAGTCAAGAAATTGATAGCAGTGCTAGCTATCGGTTTCTGTTGGTGCTATTTAACAGGTGAATGGCAACATGATCGAAAAAAAGCGATAAAAATAAAGAAGCATGGACGACTTTCAGTAAGTTTATTTCGCTACGGTTTGGACTATGTTCAAATGGCTATTCTACGTTTGATTGGTTTTGGAAAAAAAGAAGAATTTAAGAAAGTGCTAGCAATTTTAAGAAAGAAAAAGCCTGATAGGACAAGGATCCTATGAAATTTGTCGTGTACAGAGTAAATTAAATTAATACGAGCATTAATG # Right flank : TATTATTTTCAGTTATACTTATGGAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAAGCCAATTATCTCGGAAGATAATTGGCTTGAGCAAAGAGTTTGGCTATCCGATTATTCGTCGATCATCCCAATAACACGGTACTACAATCAAATTGTTTTCATGTAATCGTGACCATAATCGGATACCTAAATCCCGCTGCATATTTTGGACTGTGAAATTGGAAATTAGTAGAGTCGACTTCATACTGTCATAACGGCTATATAAAACCTTATGTACCATTTCTAGACGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACTAATAAATCAAAACTGGAGAAATGGTCGATAACTTCCTTCTCAGAACGTGAAGGATCAGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTGGTATAGTAGCGTGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATGATTGATGCACTCAGGTGGGTTTTGCC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCATAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [76.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 2378654-2379221 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849372.1 Acinetobacter sp. CIP 102082 acLsz-supercont1.12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2378654 28 100.0 32 ............................ TTCTTGCACTGCGGACAGAATCGACCATGCCC 2378714 28 100.0 32 ............................ TTAAAATTTAAGCCGTTTTGTTCTGTTACTTC 2378774 28 100.0 32 ............................ AATCTGTAAACGGCTTATATGCACAAAAATAC 2378834 28 100.0 32 ............................ TCCGAAAATTTCAATAACTTTCTCTGTTGGAT 2378894 28 100.0 32 ............................ CATTAAATACAATAAGCGCTGTCATCGACTTT 2378954 28 100.0 32 ............................ AATGTTCACAACTCGATATAAACAATAACTGT 2379014 28 100.0 32 ............................ TTGATGAACTCGAACGCCTTCTAATAATACTT 2379074 28 100.0 32 ............................ AGTAAGCGTTAAGAGGAAAACAGCCCCATTTT 2379134 28 100.0 32 ............................ ATCATGGAAAATCAAAAAGAAAACCGTGATCT 2379194 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 10 28 100.0 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : ACAGTACCAGAGTTTTAACCCAATATTTTTTAGACTCTTTAACAGCTTAATAAAATCAATAAGTTACAACAAGCCATTTTTTGATTGGGTAAATTTATAAAATACATGATAAATGCTTGTTGTAACTTATATTTTTGCTTTATTATAACTGTTCATGGCGACATACGCCATTTAGAAAATAAGCCATATTTACTTCAATCATTTGTCTTTGTTCATGGCGACATACGCCATTTAGAAAAGAACATTAACTTTTGTGCGAGTTTCGGCTGTGTTCATGGCGACATACGCCATTTAGAAAACTCAAACTGTTCAAACTTATCTGCTGCAATAGTTCATGGCGACATACGCCATTTAGAAATTGTGATACTTGATCTGAGTCATAAATATTGTGTTCATGGCGACATACGCCATTTAGAAAGCAAAGANNNNNNNNNNATTGTGTTCATGGCGACATACGCCATTTAGAAAGCAAAGAACTCGATACAGCCATGACAATGGCG # Right flank : AAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 2382865-2383372 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB849372.1 Acinetobacter sp. CIP 102082 acLsz-supercont1.12, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2382865 28 100.0 32 ............................ ATTTGCAAATGCTGTGGTTCGATTTGAATCCC 2382925 28 100.0 32 ............................ GTGCATTTCGTTTTGAGCTTGTAATACAAGAT 2382985 28 100.0 32 ............................ ACTTTGAACAAGTTTGTTGAGCTGTGTTTAAA 2383045 28 100.0 32 ............................ ACATATCAAGGTACAGCTCATAAGCCTTTTCC 2383105 28 100.0 32 ............................ GATGACACCAGTAGAAACACCGAAACGAGTTA 2383165 28 100.0 32 ............................ TAGTTAAAAACCAAGCAATCTTCTGATTGCTT 2383225 28 100.0 32 ............................ TGATAGAGCTTTACCAACATCTATAGCATTTG 2383285 28 100.0 32 ............................ TTTTCCCTCAACTGTCTGTTATCCAGAGGGTG 2383345 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 33 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TTCAAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-6.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //