Array 1 120775-122527 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZQI010000002.1 Streptococcus gordonii strain DL1 Sgordonii_DL1_LabStrain_Sia_YES_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 120775 36 100.0 30 .................................... GGATTGTCATCTGGTCGTACATAAGTCACA 120841 36 100.0 30 .................................... TCAGCTTTATCAACTTCACCTTCACCGTAT 120907 36 100.0 30 .................................... TCCTTGAGCAAAGCGAATTGAAACGACTCT 120973 36 100.0 30 .................................... CATTCAGATAGCCTTCAAATTTAGTCCCGA 121039 36 100.0 30 .................................... AAGTCTATCAAGAGCAAGCTAACGAAATGC 121105 36 100.0 30 .................................... ATGTTATTGATGTAGATGAGATGATGGCAG 121171 36 100.0 30 .................................... ACAGGGTAGTCGTGACCTTCTTCTAGGTTG 121237 36 100.0 30 .................................... TAGTACGTCACTACACTCTGCAACAGCGGG 121303 36 100.0 30 .................................... TAACCAGCGTTTTTCTGCCATCTCCTGGTC 121369 36 100.0 30 .................................... CAAACTAGAAAGTGGCCTGCTCATTTCATT 121435 36 100.0 30 .................................... TCGTAGGTTTGGTATTTTATGTTACGATTA 121501 36 100.0 30 .................................... CCGTAATTGTACGATTATTACAAGCAATCT 121567 36 100.0 30 .................................... GGATATGTTTTAAAGGTGATAATAAATTGT 121633 36 100.0 30 .................................... CACAATCCATTTTACATTTTATGCGTAAAT 121699 36 100.0 30 .................................... CTTTCTTACCATGCTATACTAGAACCATAA 121765 36 100.0 30 .................................... TCAATATCATCAAGTAAGATAGCGTTGATA 121831 36 100.0 31 .................................... CATTGTTTGAGGGTCTACAGTAGTAGTAGTG 121898 36 100.0 29 .................................... CGTAAACGGTAACCGCTTTGACTTCCTCG 121963 36 100.0 30 .................................... TACAAACCCTTGAATCTGACCTCGGACTTG 122029 36 100.0 30 .................................... TATTCACAAAGTTGTTGTATTCTTCTTTGT 122095 36 100.0 30 .................................... CACATATGTATATTGATGGCTTCGAGTATC 122161 36 100.0 30 .................................... GTCGGTGATAGTATGCCCGATTATTTAAAA 122227 36 100.0 30 .................................... AAAACCTCTCCTACCTATTCCATCGACCTT 122293 36 100.0 30 .................................... CCATTCCATTCATGGTTTTTGTTTCTTTGT 122359 36 100.0 31 .................................... TAGGACCTTCAAGCACAATCACATCAAATGG 122426 36 100.0 30 .................................... TAGTTGTAGACATGAAGTCTAAGCAGTTCA 122492 36 80.6 0 .........................G.G..ATT.GG | ========== ====== ====== ====== ==================================== =============================== ================== 27 36 99.3 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TGGACGATTTTCTATCCTATAGTGATTTTGTTGAATGTTGCGAGAAAATGGAGTTTCTGACTAATCATAGCGATTCATTATATATTGTTTTGTTTCCTTCAAATGAAGGTTATCTTCATGTCACGAAAGAAGTTTTAGAGGAAATCAATATTGTTTCCGATTATGTTGATCATTTTTATTCTCTAGAATTTATGTATGATCGCTTTACCAATCAGTATCCAATAAATCAAATACCTGATGAACAAGAATTTTTAACTTCTTTAAGAAAAATTGGATCCTATTTATTTAGCTCGGACATTCTTCATATGAGTTTATCAATAGAGGATCAAGTAGTATTAAAGATTTTAAACAAATTGTATCAGTATGAAATGAAAACAAAATTCAGTATTAAATTAGTCAATCCAATGTTATTAAAATATTTGGAAGAATAGTATTGACGAGTGAGTTTTAAGGCTTTATAATGTTTTTGAGATACAGAAACCAAAATTGACGAATTTGAG # Right flank : GTTATGCTATACGAATTTATCCAAAAAACAACCACCTAAATAGGTGGTTGTTTCAGTATCTATCATTGCTTACTAGAAGAAGAACTTGAGTTGCTTGAGCTGTCGCTACTGGATTCAGAACTGTCTTCTGAGGAGCTGGTGCTTTCAAATTGTTCTGGGTGGAGCGCTCGATAGCTTGGAGCATCAAAGAGGTCAATGGTCGATTCGCCCTTGCGTTGGCTGTAGAGACTGGTTGATTGGTCTCCTTTTTCTTCCTCGATTTTCTTCAATGCTTTGAAAGAGTGGTTGTAAGAGTATTTCTTGACATCTACCTTGCCCAAGTCATTACCCTCGTAGAAGCGAATCAAGTCACCGGTTTGAATAGCGTCACTAATCTTCAGCTGGGTATTGGCAGCATTACGAATGTCATCCAGTTCTTTCTTGATGGTTTCGTCTGGATTGGTAATTTCCTCACCGGTTTGAGTGTAGTAAGTCCGTCCGTTGAAGCTAGTGTATTTTGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //