Array 1 207754-208453 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NBRZ01000002.1 Salmonella enterica subsp. diarizonae serovar Rough:r:z strain NY_FSL S10-1123 NODE_2_length_464437_cov_44.7727_ID_7169, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
    207754	    29	 100.0	    32	.............................	CTGGCGACCGACCGGGCAACGAAACGGGCTGC	
    207815	    29	 100.0	    32	.............................	CCAGGACACCTCACGCTTAACGTTGAATTCAG	
    207876	    29	 100.0	    32	.............................	TTTGTTTTTGAGCTGAAGACGCTTCCACATCA	
    207937	    29	 100.0	    32	.............................	ATCCTGATACAGGCTTATCAGTGGCTCTTCTT	
    207998	    29	 100.0	    32	.............................	CCAGACACGGAGCCGTGCATTTCGGGGTAGAG	
    208059	    29	 100.0	    32	.............................	ACAGGTATTGATGTTACCGGATTATCCACTGC	
    208120	    29	 100.0	    32	.............................	TGATAAAGAAACACTCTCTTTCTGATAAATAT	
    208181	    29	 100.0	    32	.............................	CACCAGTAGAGCAAATCGCTGTTGCGGCCAAC	
    208242	    29	 100.0	    32	.............................	GTGACATTTGTTACCGACACGGAAGAACAGGA	
    208303	    29	 100.0	    32	.............................	GATTTCCGCGACGTGCTGCCGACGCGTCTGGA	
    208364	    29	 100.0	    32	.............................	CTGCCGGTCAGGCTGCTGAAGTTACTGTGGTC	
    208425	    29	  86.2	     0	............T............G.TA	|                               	
==========	======	======	======	=============================	================================	==================
        12	    29	  98.9	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                	       

# Left flank :   GTGCTCGCTGCCGGTGAAATTGAACCACCTCAGCCTGCGCCGGATATGTTGCCGCCAGCAATACCTGAGCCGGAATCTCTGGGTGACAGCGGACATCGGGGGCATGGTTAATGAGCATGGTGGTGGTGGTGACTGAAAACGTACCGCCGCGCCTGCGAGGGCGGCTTGCCATATGGTTACTGGAGATTCGTGCGGGGGTTTATGTTGGCGATACATCAAAACGCATTCGGGAGATGATCTGGCAACAGATTACACAACTGGGTGGAGTCGGAAACGTAGTAATGGCCTGGGCAACAAATACGGAGTCAGGTTTTGAGTTCCAGACCTGGGGGGAGAACCGCCGTATTCCGGTAGATTTGGATGGACTCAGATTAGTTTCTTTTCTTCCCGTTGAAAATCAATGAGTTGAACGTTCTTTAATAATAAGAAATTGTTATCTTAATGTTGGTGGATTGTTGGGTGGCAAAAAAGGCTTTCTGGAACAAATATATAGATTTAGT
# Right flank :  ATTTTTACCAGCAGATCAGGATGTCTTTTCCGTCTTCGCCAGCTCTTTTACTAGCGGCAGCATTATCCGTACTACGTCGCGACTACGGCGCTCAATTCGTCCTGGCAGCGCCTTGTCAATATGCTGTTGATTATCAAGCCGTACGTCGTGCCAGCTATTGCCGTTCGGGAAGGAAGCATTTTTCGCGCGTTGCTGGTATCCGTCTTTTTTACCCAGATTCCAGTTTGTAGCCTCAACGGAAAGCACAGAAATTCCCGCTTTATCGAAAACCTCCGCATCATTACAGCAACCCGTTCCTTTGGGGTAGGACGGATTGAGCCCCGGATTGGTGCTGGCGGCGATACCATAACGGCGCGCAATCGCTAATGCTCGATCGCGGGTCAGTGTACGCACCGCTTCCGGCGTATTTTTCCCGCTATTAAAATAGAGCTTGTCGCCAACAATCAGATTATCGAAATTAATGACCAGCAGCGTATTTTTCTTCTCAGCGTCACTCATTC

# Questionable array : NO	 Score: 6.21
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [5,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-13.50,-12.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-4] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.92,0   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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