Array 1 2947-6098 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACSTZ010000050.1 Acinetobacter baumannii strain A6 P_contig000050, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 2947 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 3007 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 3067 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 3127 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 3187 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 3247 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 3307 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 3367 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 3427 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 3487 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 3547 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 3607 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 3667 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 3727 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 3787 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 3847 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 3907 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 3967 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 4027 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 4087 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 4147 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 4207 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 4267 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 4327 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 4387 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 4447 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 4507 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 4567 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 4627 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 4687 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 4747 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 4807 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 4867 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 4927 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 4987 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 5047 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 5108 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 5168 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 5228 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 5288 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 5348 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 5408 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 5468 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 5528 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 5589 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 5649 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 5709 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 5769 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 5829 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 5889 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 5949 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 6009 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 6069 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //