Array 1 978280-977720 **** Predicted by CRISPRDetect 2.4 *** >NC_013926.1 Aciduliprofundum boonei T469, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 978279 29 100.0 39 ............................. ATAATTGCAACAAGCTCATCAGTATCTTCATTGTAGATA 978211 29 100.0 37 ............................. GTTTCCAACGATTTTATCTATGTTTTCATCAGTTAAG 978145 29 100.0 37 ............................. AATTTCAATAACTTTGCTTATTTCCTTTGCCATATCT 978079 29 100.0 37 ............................. CATTTTTCTCACCTCAAACATATATCATTTTCAATCA 978013 29 100.0 36 ............................. CAATACGAATTTATTGTTTATCTTTTTGTAGATTAC 977948 29 100.0 38 ............................. CTATTCTCCACTTTTTTATTTATTTCATCCCAAACTCC 977881 29 100.0 37 ............................. CATTTTTCTCACCTCAAACATATATCATTTTCAATCA 977815 29 100.0 37 ............................. ACTTCTGTTATTATTCCCTCTCTCTTTATCCTATCAA 977749 29 86.2 0 .....................T....GTA | T [977723] ========== ====== ====== ====== ============================= ======================================= ================== 9 29 98.5 37 GTAGAAGAAGTACCATGTGGTGTGGAAAC # Left flank : GAAGAAAGGGTAAACAAGGTCAACAAATTTCTGCGTTCTTACCTGCACTGGATACAAAATTCCGTGTTCCGAGGTGATATAACCCAAAGCCAGCTCCAAGCCATAAAGGACGGAATAAAGGGTATTATAGAGGAGGATTATGATTCTGTAACGATCTATGTACTTCCCAGCGAGAAGTACTTGAAAGTGATAAACATAGGGATAGAGAAAGGAACAACGGACATGATCTTCTAAAATTTCATTTTGCGTCAGGAGTATTTAAAAGAAAATAAAGATTGAAAGATAAAAGTTATTATATTTTGTATTTTTATGATTTTTGTGTTCAGTAGAACAAGGAATAAGCAGGTTTTACTTGCAAAGGGAAAAATAGAATAAAAATATAAAAAATCTTTATATTGCGTCAGGAGTTTATATACTCATGGGTTTATTGGAGACTTGACGCAAAATGGCTCTAAAAATGTTTAAATAAACCCAGTGTATTACTATATCTGTTAATCTTG # Right flank : TCTTAAGTATGGGCTAATTGAATTTGTAAAATGAAGATAGAAAAATACGAACAAAATTATTAGTTGGGCTTACATGGAACCAACAACTTCGCTTGCTGCTTTTATCAGTTCATGCTTGGTCCATGCTCTCCACTCAACCGGTACGACCACTGGATTTTCATCTCCCTCGTAGTATATGGCAAGGATGTCCTCTCTTAAATCGCTTTCCTTGGACTCTGGCATCATAAACCTGGCAAGCTCGGCCTTTGCAGCTATGATCATCTTATTCTCAAACTCAAACACCACGCCAACCTCTGCGTGCAACCTCTGTGCCTCGTTTGCAATCGTAGCAAGCTCTTTCTTGTTTCTTATCTTGAAAGGTACATCGTAAATGTAGCTCAATTTCTCCTCTGGAAACATCACTTCAAAGATATCCCTATCAATCCTAAGCATAGAGTGAGCTACTTTCGCGCTTAGAGAGAGAATGGTATATGCGGGGAGAGTTAATATCAAAGCCACTT # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAGAAGTACCATGTGGTGTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 2 984133-983097 **** Predicted by CRISPRDetect 2.4 *** >NC_013926.1 Aciduliprofundum boonei T469, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= =========================================== ================== 984132 29 100.0 32 ............................. TATTCAATATCTCATCCAATACGCCCACGCTA 984071 29 100.0 35 ............................. CTATTGCTCTTGCGGTCGCTCTCTTGTCCCTCACG 984007 29 100.0 37 ............................. CATATCCTCGTATTCTTTTAACGCCTGATTATATTCT 983941 29 100.0 42 ............................. AAAATCTCAATTGCGGTTTTAACCGCTTCCTCTTTCATTCCA 983870 29 100.0 40 ............................. GATAAAACTCTTTTAATACATTGTTTATTAGACTGTATTC 983801 29 100.0 37 ............................. CTGATATGTTATAGCCATCCTTTTTTGTTATATATCC 983735 29 100.0 40 ............................. ATTATATCTGATAACAACATATTAAACATTTGTCTATCTA 983666 29 100.0 40 ............................. ATTATATCTGATAACAACATATTAAACATTTGTCTATCTA 983597 29 100.0 37 ............................. ATCTATCTTCCCATGAAGATTCACTATTTTCGTTTAT 983531 29 100.0 38 ............................. TAATTCCTTGTGCTTTGATATGTATTTTGTTATTCTAT 983464 29 100.0 37 ............................. CGTATATTTCCCATAAATTCCCTGAGTAAATCGTAGT 983398 29 100.0 43 ............................. CTGGGCTATTGTAGCCTTTGAGTCCGTAGTATTTCTTTATTTC 983326 29 100.0 36 ............................. AATGAATCAAGAATTGCTGTAATTTTCTGCTTTAGA 983261 29 100.0 37 ............................. ATCCTTATCATCCTCCCGTCATAATCTTCTTGCTCCC 983195 29 100.0 40 ............................. ACCCCCTGCGCATAATCCCAAAAGTGCTGGATGTCAGCCT 983126 29 79.3 0 ..........A...GAA....T......A | T [983101] ========== ====== ====== ====== ============================= =========================================== ================== 16 29 98.7 38 GTAGAAGAAGTACCATGTGGTGTGGAAAC # Left flank : TCTTCAAAGGATTTTGAGCGCTGCATCTCGGCACAGAGCGAACATTTTCTCGTATCCCAAGAGCCGCCATGTTCTATCCGATGGCAGCTCTCTTGGCTGGATAAAATTGGATTGAATTTGAGAGAGGATTTTTATCCTCTCAAATTTAGAAGAAATACCGCAATGGTGTGGAACTCTCTTAAGGCCCCAAAATATACTTGAAATTCTCAGGATACTTTGAGATGCAAAACCTAAGAGTAGAAATTGCGTCAGGAGTATTTAAAAGAAAATAAGGATTGAAAGATAAAAATTATTATATTTTGCATTTTTATGATTTTTGCATTCAGGAAAACAAGATACGAGCAGGTTCTACTTGCAAAGAGAAAAATAGGATAAAAATATAAAAACACTTTATATTGCGTCAGGAGTTTATATACTCATGGGTTTATTGGAGACTTGACGCAAAATGGCTCTAAAAATGTTTAAATAAACCCAGTGTATTACTATATCTGTTAATCTAG # Right flank : TATTAATATAGAAAAAGAGGATAGAACGGCATGGAAGAAATTTGCAGAAGTGGGGTGGTTTTGTGCTAGTTTTGGTATCCTTTATGGGCACGGGGAAATATTCAAGGGTGAAGTATTACCTCGGCTCGAAGGATAACTATTTTGAAACTTCCTTCGTTTCTCGCGCCCTCGGTGAGTTTTTCAATCCAGATAAATGGCTCGTAATAACCACGGAGGAAGGGATGAAGAACTTGGAAAGTTTGAAAAGGGAAGCGCAAGATGAGAAAATTCAAGCAATAAAGATTTCCATTCCAAGAGAGGAGAGGGATGTTTGGGAGATTTTAGACAAACTCAACGATAATTTAGAGCAGGGAGATGAAGTGATACTGGATATAACGCACGCTTTTCGCCATATACCTTTCTTATCCTTCGTTATAATGACCTACCTTCAGGTTGCTAGGGGCATAAAGATTCGCGGAATTTACTACGGTGCCTACGAGTCCAGAGATGGTGATTATGTC # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGAAGAAGTACCATGTGGTGTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.17%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.70,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //