Array 1 148043-154539 **** Predicted by CRISPRDetect 2.4 *** >NZ_QTWC01000007.1 Ruminococcus sp. AF26-25AA AF26-25AA.Scaf7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 148043 32 100.0 36 ................................ TTTGCAAATCTGCGGTTGTTTCAACTACTTTTCCGT 148111 32 100.0 34 ................................ TGAATGATTACTTGCGGCAAGCGTGGAAAATATA 148177 32 100.0 34 ................................ AATTAATTAAGAAAGGAGAATGTGTTAATGAATC 148243 32 100.0 36 ................................ TAAGGCAATTGATAAGAAAAATAAAGAAATTTCTAG 148311 32 100.0 34 ................................ ATAATATTCATGCTGATTGCGAATATGAAGCTTT 148377 32 100.0 34 ................................ GATACATCAAGTTTATCTCCATTATTGGTAATGT 148443 32 100.0 35 ................................ TAGTCTGCTAAAGTGCTAAAGCGGTGAAGTGAGTA 148510 32 100.0 35 ................................ CTTGTAAATTCATGTACAGTTTTCTCATTTCCTGC 148577 32 100.0 35 ................................ TGTTTCTTCCTCTTCTTCACTGTCTTTCATTTCAA 148644 32 100.0 34 ................................ AATGATAAACCCAGATATGACGATAAAGCAGTTG 148710 32 100.0 35 ................................ ATCTCTGTCAAGTCCACCATTTTCTACCACTGCAC 148777 32 100.0 34 ................................ TAACCTTATATGGGTATGTAGAACCCTCGCCATA 148843 32 100.0 34 ................................ TTATGTACTGTCCGAAAAATCGGACTAGAATAAA 148909 32 100.0 35 ................................ CCCAGAGGGAAACTATTTACTGGTAAAAGTCAAAA 148976 32 100.0 33 ................................ TTGTCTCCAGTGTAGGCGGATTGATAACGCTCT 149041 32 100.0 33 ................................ ACCTTGGTGTGTGATGCCCATTTCGCGCATACG 149106 32 100.0 34 ................................ CGGTGAGGAAACCAACACAGACGTTAAGGGCGCA 149172 32 100.0 34 ................................ TTCGTCAAATAGGTTTTCATAAATCATGAACCCT 149238 32 100.0 35 ................................ GCAATAAACAAACCAGGTGACAGATGCGTATCCCC 149305 32 100.0 35 ................................ TCCCTCTCTCCGTTCGGTCGGGTCTCCCTGCGGTC 149372 32 100.0 36 ................................ TCTAAATTTATAACGCTGCTTCCGCGCCCGCCGCAG 149440 32 100.0 33 ................................ TTAAAAATATCATTCCACGCCGAAAGCGGTATG 149505 32 100.0 34 ................................ TAGAGCGAAGTATTCGGTTATAAGTTTCTTGCCT 149571 32 100.0 34 ................................ ACAAAGTGCATAACAAGACTAACGAAAGAAAAAA 149637 32 100.0 34 ................................ CTCAACCACAGTATAAATGACATTTGCAACCATC 149703 32 100.0 34 ................................ GGAAATAGTTTTTATATACTCGTCATGAGACATT 149769 32 100.0 33 ................................ TTGTTTGGGCTGTAACTGTTTGTAAATTAGCAT 149834 32 96.9 33 ...........T.................... GATGAATTTTCTGCCTGCTATGCCGTTTGGCTT 149899 32 100.0 33 ................................ CCGCGCCCGCCGCAGGCGCAAGGGGCTCTCCCT 149964 32 100.0 35 ................................ TCGTCCTGCATAGCGCGCCGCCATAGGTCAAGCCA 150031 32 100.0 33 ................................ TTCCGCATTGACGCTACTTCCCCTGCGAGGGTC 150096 32 100.0 35 ................................ GCTTTCATACTTCTGTCCTGTGATTTCCTCATACT 150163 32 100.0 34 ................................ TCCACCGACACCTGCAACCCAACTCAGTGTTCCC 150229 32 100.0 33 ................................ TCCTGTTCGGCGTGGTGATGTGGTTTTCAACTT 150294 32 100.0 34 ................................ TTCGAAAAACACGGCAAGCAGAACGTCATGACGG 150360 32 100.0 35 ................................ GGATTGTTCAGGGTTGTCAAGGTTTATAGTGATAC 150427 32 100.0 33 ................................ GCTGACATCAATCTCAACCGACTTCATCAGTTA 150492 32 100.0 34 ................................ CTAGCATTTAGATTGATTTTTTCAGCCATAGCAA 150558 32 100.0 35 ................................ CAAGTCCTCCATGCAGGCGTCCACGTTTGACATAA 150625 32 100.0 33 ................................ GATACCGCTCTGATTGTTGCCCACGATCATGAC 150690 32 100.0 33 ................................ GCCTTTTTCAGCCGCCGCAGTTATACCCTTTGA 150755 32 100.0 34 ................................ TTCTATATCTTGGAATATGAAATGGAAGCGTTTT 150821 32 100.0 34 ................................ GATAATTGCTGGCAGATTTTCAATCAGCGTGTCA 150887 32 100.0 34 ................................ ACCAAGAAAAGCAAGTAATCATGATGATAAAGGG 150953 32 100.0 33 ................................ GACAATGCCCTGATCTGTAGTTGTTACGATTTC 151018 32 100.0 36 ................................ GACCTGGTGACATTTGAACGAGTGAAAAAGGGTAAA 151086 32 100.0 34 ................................ AATGCTACTTTTTGCCACCTATCATTACCCCCTT 151152 32 100.0 35 ................................ TGGCGGTGGTGATATTTTTGCGGCGTCCGAAATCT 151219 32 100.0 35 ................................ TTCTAAATCAAAATCTGCAAACTGTTTTTCAACAG 151286 32 100.0 34 ................................ TGAAAATCAAAATGGCAGATTACTATGACTATGA 151352 32 100.0 35 ................................ TTTGTATCAAAATTTATGCCATTTTGTACTTAAAA 151419 32 100.0 33 ................................ TCTGGATATAATTTTCTTTGTAAATGCCTGATT 151484 32 100.0 33 ................................ ATGCTTAACAGCGGTTTCAGTATGAAAGAGGTT 151549 32 100.0 34 ................................ TATCTTTAGCGAGTAGGTCGCTCAGAGCGTAGAT 151615 32 100.0 33 ................................ GCGGCACTTACTCCGCCGAATAGGCTTGCAATG 151680 32 100.0 33 ................................ CTCTGCTATGAGATTATTAACAGTTCGTGTTTT 151745 32 100.0 35 ................................ GACATCTTTGCCTGTCACCAATCTCCGTTCTAAAA 151812 32 100.0 32 ................................ TGTATAAATTCCCTCAAAGTCCCATACTCCTA 151876 32 100.0 33 ................................ TCTTTAAGAGCATTGCTCTTAAATGTGTTCATG 151941 32 100.0 34 ................................ AAACTGATAGCGTGTTTGCTTTGTGCGTTTATCC 152007 32 100.0 34 ................................ TAATATCCTCACCTTGCAAAACAGTATCGGAAAT 152073 32 100.0 33 ................................ TTTTATAAGCCCACGACGAACGCACTCTGCGTC 152138 32 100.0 34 ................................ TTTTGTACCAATGCAGGGTGATATATGTATTTTT 152204 32 100.0 35 ................................ GAAAACGTTGTTGATATGGGCAAGCAGATTTTGGA 152271 32 100.0 33 ................................ CTGCATTATTATCGCCGCGTTTTAGCCCCGTTG 152336 32 100.0 34 ................................ TTGTAAATGGTTGCATGGGGTACTTTTTTCTAAT 152402 32 100.0 33 ................................ TGTTTATCTCGTCAATACATTTTTTATTATATT 152467 32 100.0 34 ................................ ATGAATGTTTTCTATGCTATAATTAAAAACTGGT 152533 32 100.0 34 ................................ TCATTGACTGTGTGGTTTTTATTCCTTTTAGATA 152599 32 100.0 33 ................................ AAAGAGCTGTCAATGTGGGTAAATAAGCTTATG 152664 32 100.0 33 ................................ ACACACTGCGTAAGTTTTACCGTTTGAACGTTG 152729 32 100.0 34 ................................ ATTAATCATGAATGGCAGTGCCTTTTCTCGTTGT 152795 32 100.0 34 ................................ ATCATTAAGGTCTACAAGCAGAACAAGAAAAAAG 152861 32 100.0 33 ................................ ATCGTTGACGGTTGTAGGGTCACAACTGAGGAT 152926 32 100.0 33 ................................ TTTCAATGCCTCTTCCACAACGATCGAGGGCGT 152991 32 100.0 35 ................................ ATCCCTATCACGCATAATAGATGATAATAGCTGAG 153058 32 100.0 33 ................................ AAAGAGCTGTCAATGTGGGTCAATAAGCTTATG 153123 32 100.0 35 ................................ ATCCATAAGAGCGTGAGTTGCTTTTAGGGTCTGCG 153190 32 100.0 36 ................................ CCCCTTCATTAGTTGCAACGTTGCAACTTTCAGCCG 153258 32 100.0 34 ................................ TTTCCACGTACCTTTGTTGTAAATCTCCGCAAGG 153324 32 100.0 33 ................................ CATTATAGAAATAAATGTATTCACTTGACAAAA 153389 32 100.0 33 ................................ CCAATGAATGTTCCTATCAGGGATAGCACTGCT 153454 32 100.0 33 ................................ CCCGTTATTCCAATTAATGAAATCACTAATAAT 153519 32 100.0 32 ................................ AGGGAAAGCACTCAGCGTATTTTTACAAGAAT 153583 32 100.0 36 ................................ GTCATATTGAGTTTACTGACGAAAAACTTCTGAAAA 153651 32 100.0 33 ................................ TTGGATATTCTTGCGATGAAATCAGTTTATAGC 153716 32 100.0 34 ................................ AATTCATGCAGATCAGAGAGACTTGTACACCGAA 153782 32 100.0 33 ................................ ATCTTGTGTCATGCCTCTTTTTTCTCTCATGTC 153847 32 100.0 33 ................................ AATCGTAACCGAATTTTTCGGGGTGGTAAGTCT 153912 32 100.0 33 ................................ GCAAAATGGTTTGCAGGCTAGCAGAATAAAAAA 153977 32 100.0 36 ................................ TGTTCCTGTCAATGCGTTTTTCCTGGTATTCACGAT 154045 32 100.0 34 ................................ TTTAGGAGGTATAACATATGGCAAGATACATCGA 154111 32 100.0 35 ................................ TCTGATAGCAGGTACGCTCAGCTTTGGGATAGCTA 154178 32 100.0 35 ................................ ATACTTGAAGAAAAAGAGAAGAATAGCAGTGCAGG 154245 32 100.0 33 ................................ TCTGCGGTTGAAGTTATCCGCTCACCTTTACTT 154310 32 100.0 34 ................................ TTTGAGATGTTCTAATGGCACTTGAACATACTCG 154376 32 100.0 34 ................................ TTTAGGAGGTATAACATATGGCAAGATACATCGA 154442 32 100.0 34 ................................ GTAGTACAGCATTACGCCTGACATTGCCTGCTTG 154508 32 96.9 0 ...........T.................... | ========== ====== ====== ====== ================================ ==================================== ================== 99 32 99.9 34 GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Left flank : GGCGAGCTAGATGAGTACCCGAACTATTTGCTGAAATAGAGGTGATATAAATGATGACCTTAGTAAGCTATGACGTGTCTACCACGGATAATAAGGGCAAAACAAGACTTAGAAAAGTGTCGAAAGAGTGTCAAAATTATGGTCAGCGAGTGCAGAACAGCGTGTTTGAAATAGACGTAGACTATGGCACTTTTCTGAAAGTGAAAGATAAACTTCTGAAAATAATAGACCCAAAGCATGATAGTCTGCGGATATATTACTTAGGCAACAATTGGAAGCATAGAGTAGAACACTACGGCACCAAAGAGACCTATGACCCTGAAGGCGTCCTAATATTTTGACCAGCGTACCCCAAGTGATCCACAAATCCCTAGTAAGTTCGCATGAAAATGCCATGCTATTTGTGAACGCACAGTGAACAAAATCAAACCGATACCCATTAAATAAAAAAATAAGTCCGCATCACGTTGAGCAAGCACCAGATATACACAACATCAAGT # Right flank : TACGATAATGTAAAAAAGAGAGGTATCATGCAATGATTAAATTATTTTTGAAAGAATACTTAGATGAAATGTCAACTGTATGTAGGGATAATCAGAATAATGTAAGTATCGCTGTAAATCCCGATTCTGAAAGGCAGGGATATCCATATTTCAAATTTTATAATTCCGTTTATTATGGAGATGCTGCTAAGGTGGTTAGAATTTTATTTAATTCAGCAGATTATGTTGATAATAAAAATGCAGAAGACCAAAAGCTTTGGAAACTTTCGCATAAAGAAAAAAAGTTGCTTAAAGAACTTTTGAGTAGTCCTTCTGCAGAATATTCAGATATGACTATTTGGGAAGCTTGTAAATTTGAGTGGAACTTTGAATATTTAGAGCAATCTATTAACTTAGATAAATATGTAAATGGTGAATATGATAAGGATAAAACATTCACAGAAAATCCTGGCTATGTACCCTACAGTTTGGAAATGCCTGATTATTTAGAATTAAACTTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCACGCTCCACGTGAGCGTGTGAGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.70,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [65.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //