Array 1 61-455 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAQA010000135.1 Arcanobacterium phocae strain APH96 NODE_136_length_493_cov_0.841530, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 61 36 100.0 39 .................................... ACGTGCCGGACACACCACCCCCCGCCTCACCGATGTTCA 136 36 100.0 35 .................................... CAGGCCCGGAGCTCGGTCACCACCGCGTCCGGTGC 207 36 100.0 34 .................................... GCATGTGCTTCTTCTGGTGGTTGCGGATTGACTG 277 36 100.0 35 .................................... CCGGACGGGTTGCCGATGACCACGGCGGTGTGCCC 348 36 100.0 36 .................................... CGCGTTGGACACCATGAGCGGCACCGTGGCCTTCAT 420 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 6 36 100.0 36 GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Left flank : GTCCGCTCCCCACAGGAGCGGAGACGCGCGCGGCTGGGGACCCGGGGCGATGCTGGTGACG # Right flank : ACCCGCGACCTCGCCACCGTCACGTCTCCGGGCTCGCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAACGAAGTCCGCTCCCCACAGGAGCGGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [23.3-15.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 1 15427-19603 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABAQA010000007.1 Arcanobacterium phocae strain APH96 NODE_7_length_104029_cov_72.037949, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 15427 29 100.0 32 ............................. GAAGAAGTATTCATCACTTCAATCAGCGCAGA 15488 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 15549 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 15610 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 15671 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 15732 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 15793 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 15854 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 15915 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 15975 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 16036 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 16097 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 16158 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 16219 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 16280 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 16341 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 16402 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 16463 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 16524 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 16585 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 16646 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 16707 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 16768 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 16829 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 16890 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 16951 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 17012 29 100.0 32 ............................. GATCATTTCCACTAGCTCAAATGCGAATCTAC 17073 29 100.0 32 ............................. ACTGCTGATTCGGTAATCGGAGCCATGATTAC 17134 29 100.0 32 ............................. ACTTAGCTACTCCGGTTCCTGTAGGATCGCCT 17195 29 100.0 32 ............................. CTGACAGCAGACCCAGAGTTACGTTATGTAGG 17256 29 100.0 32 ............................. ATTCTGCAAGTGCCCTAGCGCGTTCGTTAGTT 17317 29 100.0 32 ............................. ATCATTGCGGGTGGAAGCCCGTGCCAAGATCT 17378 29 100.0 32 ............................. TTCAAGTTTTCCGGGGATTTCTACCGTATTAG 17439 29 100.0 31 ............................. GTCGTATGCGAAGGATAGCTGGGATAGGCGT 17499 29 100.0 32 ............................. GATCTTGTCGGAAATGAAATGAGCGCCGCCGA 17560 29 100.0 32 ............................. ACCTGTTGGAACTGTGGTCCCGGAGGGGACGC 17621 29 100.0 32 ............................. ATGAAAGACCTAGCCCGGCTTATCAACTATCA 17682 29 100.0 32 ............................. TTGTTACCAGGCGCCAAAGCATGATCAGCATC 17743 29 100.0 32 ............................. GAAAGGTCGAGTGCCGGTTTTTAAAACCAACC 17804 29 100.0 32 ............................. ATATCCCCGTCCTGAAATACCTGGCGCGGCTT 17865 29 100.0 32 ............................. TACATTCGGATCACTATAGATCTTCCGTTTTA 17926 29 100.0 32 ............................. ATAATTTCTTCTCACCGACCGCATGCCCCGGA 17987 29 100.0 32 ............................. TCGTCAGGGAATTATGGAGAAGCTACGCAAGG 18048 29 100.0 32 ............................. AATTCTCGGCTAAAGCTATGCACGGCGTTCTC 18109 29 96.6 32 ............................T CCGCGACCGTGTGGGTCCCAAAGCCATACGGG 18170 29 100.0 32 ............................. TAGAAGCGTGGAAATTCCGCCGGCAAGTGTGG 18231 29 100.0 32 ............................. CGTGCAAGATCCTCGCACACCGATTCCCGGGA 18292 29 100.0 32 ............................. GAATGGAAGTTCCATAGAGTGCCTTCGCCACT 18353 29 96.6 32 ............................T TATGCCGGCCGGCGTCGCCTTCTATCTAGCAG 18414 29 100.0 32 ............................. GCTGATCCCTACAGCGACGAAACACTCGCTTT 18475 29 100.0 32 ............................. TTCATCGTTGAGAGTTCCCCAACCAACTTGCG 18536 29 100.0 32 ............................. GTCGCCGCAAGATGCATTACGTGCAACAGCGA 18597 29 96.6 32 ............................A AATCGATTTTAACCGGCGGGATCACAAGACCG 18658 29 100.0 32 ............................. TCACGGATCAGCGTCGGAGCCTCATCTTGTAA 18719 29 100.0 32 ............................. TTCCAGTCGGGGTTAGCTAGGAATGATTCAAG 18780 29 100.0 32 ............................. AGGGAAGATGCAGACTGCGCAAGGCGCGCAAA 18841 29 100.0 32 ............................. TGAAGACCAGGCACGCACTTGGAAGAAGCAAG 18902 29 100.0 32 ............................. GTAGCGACGTGTGCGCAAGACGCAGTGAACCT 18963 29 96.6 34 ............................A CGGTTTGTCCTTTCGGCACGCTGATAGTGAATGG 19026 29 100.0 32 ............................. ATCGAAAATCTGGCTAGACTCCTTACCACCGG 19087 29 100.0 32 ............................. GAACTCTGGCATTTTATGTTCGTCTAATTGTG 19148 29 96.6 32 ..................A.......... ATCACAACCTTACAACTACCGGCAACTGACGG 19209 29 100.0 32 ............................. GATAGTCGCCACCCTGACATTGGGCAGCGAAA 19270 29 100.0 32 ............................. GCTAGCTAGGAGAGTTCCTTTCGTTAATGGTT 19331 29 100.0 32 ............................. AAAAAAGACCACCAAACGGTGGCCTCAGTCTT 19392 29 100.0 32 ............................. TTCGGCGACTACCCCGCCGAGGGATGGGCGCT 19453 29 100.0 32 ............................. ATCCGGCGCGTTTACGGCAATATTCCATTACG 19514 29 100.0 32 ............................. AAGGTGATTTTGAAACCGGCTGGAAAGCTTGT 19575 29 96.6 0 ........................C.... | ========== ====== ====== ====== ============================= ================================== ================== 69 29 99.6 32 CTCTTCCCCGCACACGCGGGGGTATTTCC # Left flank : TAGACGCGATTTACGGAGGCAAATTCATAGCAAGCATATATTGGAAGACATGCTTGGCACGCTCATGGAGATCTTAGAACCACACCTGCCGAATCGTGATGATGATCGATTGATCAATGATAATGGTGAAGTTTCTGGGCACGTACAATACGGAAAAGATGATGAGTGATGTTTGCAGTCTTAACAATATCTGCAGTTCCCGAGCATCTTCATGGCTATGTAACCCGATTTCTCACTGAGGTTGAAAGTGGGGTTTACGTCGGAAATATTTCTCGGAACGTGCGTGAACGCCTATGGGAACGTGTGAGTAGTACGCTTGACGAAGGAACTTCTACTATGATTTATAGCGACCCGCGACAAGAACAAGGATTCTCGATGCTCACTGCAGGAAAAAATTCACGAAAAGTATTGGACTTAGACGGTCTAACCGTTGTGTCCATGCGTCCTGGACGTGGAGAATCCAAAATTCGAGATCGTTGAAAATAAAGGGTTTCGTTAGT # Right flank : CAAAATTTGAAGGCGATTCAAAGATGGGCGCTCAAGTGATCGGAACGATCATGATCAAGGTAGCGCTTCTTATTGTCGCTATTCAAAATGTAGATCTAATTCTTAAAGCTATTAACGAAGCTGGCGAAACACTTATTAACGGGCTGAAAAAGTATGCAACAGTCATACAGGCTAACCCTGTCAATATCGGTGATCTTGATATGGATACTCTAGATATGATCGGCGCAATGATCATTCTATTCTTGCCCTGGCTGATTTCAATGCTTGGCGGCATCGTCGTAAAAATCGTTGTACTCTTGCGATTTGCTGAGATATACATACTTTCTGCTGGGGCAACTCTACCGTTAGCATTCTTGGGTCATACCGACACAAAATAAATTTCGATCGGATACCTCAAGAAGTATGCAACGGCCATGCTTCACGGTTTCACGATCATCCTTGTCCTGATCATCTTTGCCAAATTCCAAGGAGCCGGTACAGACCTAGGAGAAAACCCAACA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCCCCGCACACGCGGGGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //